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Carg18440 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18440
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionStress-response A/B barrel domain-containing protein
Genome locationCarg_Chr20:891183..891988
RNA-Seq ExpressionCarg18440
SyntenyCarg18440
Gene Ontology termsNA
InterPro domainsIPR011008 - Dimeric alpha-beta barrel
IPR013097 - Stress responsive alpha-beta barrel
IPR044662 - Stress-response A/B barrel domain-containing protein HS1/DABB1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008458618.1 PREDICTED: stress-response A/B barrel domain-containing protein At5g22580 [Cucumis melo]6.5e-4895.19Show/hide
Query:  MGGEFKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFLMTFENKEAHAAFVGHPKHVEFSATFSAAIDKIVLLDFPAI
        MG EFKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQE+EGPEMLTQGFTHAFLMTFENKEAH AFVGHPKHVEFSATFSAAIDKIV+LDFPAI
Subjt:  MGGEFKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFLMTFENKEAHAAFVGHPKHVEFSATFSAAIDKIVLLDFPAI

Query:  RTKP
        R KP
Subjt:  RTKP

XP_022140579.1 stress-response A/B barrel domain-containing protein At5g22580 [Momordica charantia]6.5e-4890.74Show/hide
Query:  MGGEFKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFLMTFENKEAHAAFVGHPKHVEFSATFSAAIDKIVLLDFPAI
        MGGEFKHLVLVKFKEGAAV+ ILKGMENLVSE+EAVKSFEWGQ++EGPEMLTQGFTHAFLMTFENKEAHAAFVGHPKH+EFSATFSAAIDKIVLLDFPAI
Subjt:  MGGEFKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFLMTFENKEAHAAFVGHPKHVEFSATFSAAIDKIVLLDFPAI

Query:  RTKPAPTA
          KP P A
Subjt:  RTKPAPTA

XP_022943456.1 stress-response A/B barrel domain-containing protein At5g22580-like [Cucurbita moschata]8.8e-53100Show/hide
Query:  MGGEFKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFLMTFENKEAHAAFVGHPKHVEFSATFSAAIDKIVLLDFPAI
        MGGEFKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFLMTFENKEAHAAFVGHPKHVEFSATFSAAIDKIVLLDFPAI
Subjt:  MGGEFKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFLMTFENKEAHAAFVGHPKHVEFSATFSAAIDKIVLLDFPAI

Query:  RTKPAPTA
        RTKPAPTA
Subjt:  RTKPAPTA

XP_022986047.1 stress-response A/B barrel domain-containing protein At5g22580-like [Cucurbita maxima]2.6e-5299.07Show/hide
Query:  MGGEFKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFLMTFENKEAHAAFVGHPKHVEFSATFSAAIDKIVLLDFPAI
        MGGEFKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFLMTFENKEAHAAFVGHPKHVEFSATFSAAI+KIVLLDFPAI
Subjt:  MGGEFKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFLMTFENKEAHAAFVGHPKHVEFSATFSAAIDKIVLLDFPAI

Query:  RTKPAPTA
        RTKPAPTA
Subjt:  RTKPAPTA

XP_038901331.1 stress-response A/B barrel domain-containing protein At5g22580 [Benincasa hispida]2.2e-4896.15Show/hide
Query:  MGGEFKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFLMTFENKEAHAAFVGHPKHVEFSATFSAAIDKIVLLDFPAI
        M GEFKHLVLVKFKEGAAV EILKGMENLVSEVEAVK+FEWGQEIEGPEMLTQGFTHAFLMTFENKEAHAAFVGHPKHVEFSATFSAAIDKIV+LDFPAI
Subjt:  MGGEFKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFLMTFENKEAHAAFVGHPKHVEFSATFSAAIDKIVLLDFPAI

Query:  RTKP
        RTKP
Subjt:  RTKP

TrEMBL top hitse value%identityAlignment
A0A0A0KB18 Stress-response A/B barrel domain-containing protein3.2e-4895.19Show/hide
Query:  MGGEFKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFLMTFENKEAHAAFVGHPKHVEFSATFSAAIDKIVLLDFPAI
        MG EFKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQE+EGPEMLTQGFTHAFLMTFENKEAH AFVGHPKHVEFSATFSAAIDKIV+LDFPAI
Subjt:  MGGEFKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFLMTFENKEAHAAFVGHPKHVEFSATFSAAIDKIVLLDFPAI

Query:  RTKP
        R KP
Subjt:  RTKP

A0A5A7SVA5 Dimeric alpha-beta barrel3.2e-4895.19Show/hide
Query:  MGGEFKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFLMTFENKEAHAAFVGHPKHVEFSATFSAAIDKIVLLDFPAI
        MG EFKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQE+EGPEMLTQGFTHAFLMTFENKEAH AFVGHPKHVEFSATFSAAIDKIV+LDFPAI
Subjt:  MGGEFKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFLMTFENKEAHAAFVGHPKHVEFSATFSAAIDKIVLLDFPAI

Query:  RTKP
        R KP
Subjt:  RTKP

A0A6J1CG30 stress-response A/B barrel domain-containing protein At5g225803.2e-4890.74Show/hide
Query:  MGGEFKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFLMTFENKEAHAAFVGHPKHVEFSATFSAAIDKIVLLDFPAI
        MGGEFKHLVLVKFKEGAAV+ ILKGMENLVSE+EAVKSFEWGQ++EGPEMLTQGFTHAFLMTFENKEAHAAFVGHPKH+EFSATFSAAIDKIVLLDFPAI
Subjt:  MGGEFKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFLMTFENKEAHAAFVGHPKHVEFSATFSAAIDKIVLLDFPAI

Query:  RTKPAPTA
          KP P A
Subjt:  RTKPAPTA

A0A6J1FRR7 stress-response A/B barrel domain-containing protein At5g22580-like4.3e-53100Show/hide
Query:  MGGEFKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFLMTFENKEAHAAFVGHPKHVEFSATFSAAIDKIVLLDFPAI
        MGGEFKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFLMTFENKEAHAAFVGHPKHVEFSATFSAAIDKIVLLDFPAI
Subjt:  MGGEFKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFLMTFENKEAHAAFVGHPKHVEFSATFSAAIDKIVLLDFPAI

Query:  RTKPAPTA
        RTKPAPTA
Subjt:  RTKPAPTA

A0A6J1J6I1 stress-response A/B barrel domain-containing protein At5g22580-like1.2e-5299.07Show/hide
Query:  MGGEFKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFLMTFENKEAHAAFVGHPKHVEFSATFSAAIDKIVLLDFPAI
        MGGEFKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFLMTFENKEAHAAFVGHPKHVEFSATFSAAI+KIVLLDFPAI
Subjt:  MGGEFKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFLMTFENKEAHAAFVGHPKHVEFSATFSAAIDKIVLLDFPAI

Query:  RTKPAPTA
        RTKPAPTA
Subjt:  RTKPAPTA

SwissProt top hitse value%identityAlignment
I6WU39 Olivetolic acid cyclase4.0e-0832.63Show/hide
Query:  KHLVLVKFKE---GAAVEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFLMTFENKEAHAAFVGHPKHVEFSATFSAAIDKIVLLDF
        KHL+++KFK+    A  EE  K   NLV+ + A+K   WG+++   +   +G+TH   +TFE+ E    ++ HP HV F   + +  +K+++ D+
Subjt:  KHLVLVKFKE---GAAVEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFLMTFENKEAHAAFVGHPKHVEFSATFSAAIDKIVLLDF

Q9FK81 Stress-response A/B barrel domain-containing protein At5g225802.8e-3365.38Show/hide
Query:  FKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFLMTFENKEAHAAFVGHPKHVEFSATFSAAIDKIVLLDFPAIRTKP
        FKHLV+VKFKE   V+EILKG+ENLVS+++ VKSFEWG++ E  +ML QGFTHAF MTFENK+ + AF  HP HVEFSA F+A IDKIVLLDFP    K 
Subjt:  FKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFLMTFENKEAHAAFVGHPKHVEFSATFSAAIDKIVLLDFPAIRTKP

Query:  APTA
        +  A
Subjt:  APTA

Q9LUV2 Stress-response A/B barrel domain-containing protein HS16.6e-1943.88Show/hide
Query:  GEFKHLVLVKFKEGAA---VEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFLMTFENKEAHAAFVGHPKHVEFSATFSAAIDKIVLLDF
        G  KH++L  FK+G +   +EE++KG  NLV+ +E +K+F WG+++   E L QG+TH F  TFE+KEA A ++ HP HVEF+  F  ++DK++++D+
Subjt:  GEFKHLVLVKFKEGAA---VEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFLMTFENKEAHAAFVGHPKHVEFSATFSAAIDKIVLLDF

Arabidopsis top hitse value%identityAlignment
AT3G17210.1 heat stable protein 14.7e-2043.88Show/hide
Query:  GEFKHLVLVKFKEGAA---VEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFLMTFENKEAHAAFVGHPKHVEFSATFSAAIDKIVLLDF
        G  KH++L  FK+G +   +EE++KG  NLV+ +E +K+F WG+++   E L QG+TH F  TFE+KEA A ++ HP HVEF+  F  ++DK++++D+
Subjt:  GEFKHLVLVKFKEGAA---VEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFLMTFENKEAHAAFVGHPKHVEFSATFSAAIDKIVLLDF

AT5G22580.1 Stress responsive A/B Barrel Domain2.0e-3465.38Show/hide
Query:  FKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFLMTFENKEAHAAFVGHPKHVEFSATFSAAIDKIVLLDFPAIRTKP
        FKHLV+VKFKE   V+EILKG+ENLVS+++ VKSFEWG++ E  +ML QGFTHAF MTFENK+ + AF  HP HVEFSA F+A IDKIVLLDFP    K 
Subjt:  FKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFLMTFENKEAHAAFVGHPKHVEFSATFSAAIDKIVLLDFPAIRTKP

Query:  APTA
        +  A
Subjt:  APTA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGAGAGTTCAAGCATTTGGTGCTCGTAAAGTTTAAGGAAGGAGCGGCGGTAGAAGAGATTCTCAAAGGCATGGAGAATCTCGTCTCTGAAGTCGAAGCTGTCAA
ATCCTTTGAGTGGGGACAGGAAATAGAGGGACCAGAGATGCTTACACAGGGCTTCACGCACGCCTTCTTGATGACATTCGAGAACAAGGAAGCTCATGCTGCGTTTGTCG
GGCATCCCAAGCATGTTGAATTCTCTGCAACTTTCTCGGCAGCCATTGACAAGATTGTGCTGCTTGATTTCCCGGCTATTCGTACCAAGCCAGCTCCAACAGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGGAGAGTTCAAGCATTTGGTGCTCGTAAAGTTTAAGGAAGGAGCGGCGGTAGAAGAGATTCTCAAAGGCATGGAGAATCTCGTCTCTGAAGTCGAAGCTGTCAA
ATCCTTTGAGTGGGGACAGGAAATAGAGGGACCAGAGATGCTTACACAGGGCTTCACGCACGCCTTCTTGATGACATTCGAGAACAAGGAAGCTCATGCTGCGTTTGTCG
GGCATCCCAAGCATGTTGAATTCTCTGCAACTTTCTCGGCAGCCATTGACAAGATTGTGCTGCTTGATTTCCCGGCTATTCGTACCAAGCCAGCTCCAACAGCTTGA
Protein sequenceShow/hide protein sequence
MGGEFKHLVLVKFKEGAAVEEILKGMENLVSEVEAVKSFEWGQEIEGPEMLTQGFTHAFLMTFENKEAHAAFVGHPKHVEFSATFSAAIDKIVLLDFPAIRTKPAPTA