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Carg18447 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18447
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionClathrin light chain
Genome locationCarg_Chr20:910564..912590
RNA-Seq ExpressionCarg18447
SyntenyCarg18447
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0016192 - vesicle-mediated transport (biological process)
GO:0030130 - clathrin coat of trans-Golgi network vesicle (cellular component)
GO:0030132 - clathrin coat of coated pit (cellular component)
GO:0005198 - structural molecule activity (molecular function)
InterPro domainsIPR000996 - Clathrin light chain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062081.1 clathrin light chain 1 [Cucumis melo var. makuwa]8.7e-12664.9Show/hide
Query:  MASFDAFGNEEHEEQ-RRHSPTTPPFDDDAYMGYDSSLPSHRYDSSTAF------STADQLPH------EDDVVSDVHSAGNTTNPNLSDVYDFGVSDPN
        MASFDAF NEEHE+Q   HSPT  PFDDD YMGYDS LPS  YDSST F      S A+Q P       EDDV+SD+H+ GNTT PNLSD YDFGVS+PN
Subjt:  MASFDAFGNEEHEEQ-RRHSPTTPPFDDDAYMGYDSSLPSHRYDSSTAF------STADQLPH------EDDVVSDVHSAGNTTNPNLSDVYDFGVSDPN

Query:  PSYVSPFDHVEADGEHYNVA----GSLGGIDNGGIFVSDGPILPDPSEMGEDGHARREWRRQNAIDLEEKQKKEKEMRNQIMNEAEEYKASFDEKRKANC
        P YVSPFD V+AD +H N A    G  GG D+GG+FVSDGP+LPDPSEM E+G+ARREWRRQNAIDLEEK+KKEKEMRNQI+NEAEEYKASF EKR+ NC
Subjt:  PSYVSPFDHVEADGEHYNVA----GSLGGIDNGGIFVSDGPILPDPSEMGEDGHARREWRRQNAIDLEEKQKKEKEMRNQIMNEAEEYKASFDEKRKANC

Query:  ETNRTHNREREKLYLINQERFHKEAHKHYWKAIAEIIPREVPNIEKRRGKKDADKNPSVVVVRGPKPGKPTDLSRMRQILLKLKQTPLPHMMHPPLEPA-
        ETN+ HNREREKLY  NQERFHKEA KHYWKAIAEIIPREVPNIEKRRGKKD D  PS+VVV+GPKPGKPTDLSRMRQILLKLKQTP PHMM PP + A 
Subjt:  ETNRTHNREREKLYLINQERFHKEAHKHYWKAIAEIIPREVPNIEKRRGKKDADKNPSVVVVRGPKPGKPTDLSRMRQILLKLKQTPLPHMMHPPLEPA-

Query:  ----------------------KDSKDGKDTKEG-----------------TKSEGKDDVEDKEA--------PMSPAEDMDANDTPDRPEIEVEA--PT
                              KDSKDGKDTKEG                  K EGK +V++K+A        P SPA +MDAN TPD+P IEVEA  P 
Subjt:  ----------------------KDSKDGKDTKEG-----------------TKSEGKDDVEDKEA--------PMSPAEDMDANDTPDRPEIEVEA--PT

Query:  TTDAVQTVELVSRSAE
          D+ Q V LVS SAE
Subjt:  TTDAVQTVELVSRSAE

KAG6570505.1 Clathrin light chain 1, partial [Cucurbita argyrosperma subsp. sororia]1.2e-18692.76Show/hide
Query:  MASFDAFGNEEHEEQRRHSPTTPPFDDDAYMGYDSSLPSHRYDSSTAFSTADQLPHEDDVVSDVHSAGNTTNPNLSDVYDFGVSDPNPSYVSPFDHVEAD
        MASFDAFGNEEHEEQRRHSPTTPPFDDDAYMGYDSSLPSHRYDSST FSTADQLPHEDDVVSDVHSAGNTTNPNLSDVYDFGVSDPNPSYVSPFDHVEAD
Subjt:  MASFDAFGNEEHEEQRRHSPTTPPFDDDAYMGYDSSLPSHRYDSSTAFSTADQLPHEDDVVSDVHSAGNTTNPNLSDVYDFGVSDPNPSYVSPFDHVEAD

Query:  GEHYNVAGSLGGIDNGGIFVSDGPILPDPSEMGEDGHARREWRRQNAIDLEEKQKKEKEMRNQIMNEAEEYKASFDEKRKANCETNRTHNREREK-----
        G HYNVAGSLGGIDNGGIFVSDGPILPDPSEM EDGHARREWRRQNAIDLEEKQKKEKEMRNQIMNEAEEYKASFDEKRKANCETNRTHNREREK     
Subjt:  GEHYNVAGSLGGIDNGGIFVSDGPILPDPSEMGEDGHARREWRRQNAIDLEEKQKKEKEMRNQIMNEAEEYKASFDEKRKANCETNRTHNREREK-----

Query:  -------------------LYLINQERFHKEAHKHYWKAIAEIIPREVPNIEKRRGKKDADKNPSVVVVRGPKPGKPTDLSRMRQILLKLKQTPLPHMMH
                           LYLINQERFHKEAHKHYWKAIAEIIPREVPNIEKRRGKKDADKNPSVVVVRGPKPGKPTDLSRMRQILLKLKQTPLPHMMH
Subjt:  -------------------LYLINQERFHKEAHKHYWKAIAEIIPREVPNIEKRRGKKDADKNPSVVVVRGPKPGKPTDLSRMRQILLKLKQTPLPHMMH

Query:  PPLEPAKDSKDGKDTKEGTKSEGKDDVEDKEAPMSPAEDMDANDTPDRPEIEVEAPTTTDAVQTVELVSRSAE
        PPLEPAKDSKDGKDTKEGTKSEGKDDVEDKEAPMSPAEDMDANDTPDRPEIEVEAPTTTDAVQTVELVSRSAE
Subjt:  PPLEPAKDSKDGKDTKEGTKSEGKDDVEDKEAPMSPAEDMDANDTPDRPEIEVEAPTTTDAVQTVELVSRSAE

KAG7010367.1 Clathrin light chain 1, partial [Cucurbita argyrosperma subsp. argyrosperma]6.3e-193100Show/hide
Query:  MASFDAFGNEEHEEQRRHSPTTPPFDDDAYMGYDSSLPSHRYDSSTAFSTADQLPHEDDVVSDVHSAGNTTNPNLSDVYDFGVSDPNPSYVSPFDHVEAD
        MASFDAFGNEEHEEQRRHSPTTPPFDDDAYMGYDSSLPSHRYDSSTAFSTADQLPHEDDVVSDVHSAGNTTNPNLSDVYDFGVSDPNPSYVSPFDHVEAD
Subjt:  MASFDAFGNEEHEEQRRHSPTTPPFDDDAYMGYDSSLPSHRYDSSTAFSTADQLPHEDDVVSDVHSAGNTTNPNLSDVYDFGVSDPNPSYVSPFDHVEAD

Query:  GEHYNVAGSLGGIDNGGIFVSDGPILPDPSEMGEDGHARREWRRQNAIDLEEKQKKEKEMRNQIMNEAEEYKASFDEKRKANCETNRTHNREREKLYLIN
        GEHYNVAGSLGGIDNGGIFVSDGPILPDPSEMGEDGHARREWRRQNAIDLEEKQKKEKEMRNQIMNEAEEYKASFDEKRKANCETNRTHNREREKLYLIN
Subjt:  GEHYNVAGSLGGIDNGGIFVSDGPILPDPSEMGEDGHARREWRRQNAIDLEEKQKKEKEMRNQIMNEAEEYKASFDEKRKANCETNRTHNREREKLYLIN

Query:  QERFHKEAHKHYWKAIAEIIPREVPNIEKRRGKKDADKNPSVVVVRGPKPGKPTDLSRMRQILLKLKQTPLPHMMHPPLEPAKDSKDGKDTKEGTKSEGK
        QERFHKEAHKHYWKAIAEIIPREVPNIEKRRGKKDADKNPSVVVVRGPKPGKPTDLSRMRQILLKLKQTPLPHMMHPPLEPAKDSKDGKDTKEGTKSEGK
Subjt:  QERFHKEAHKHYWKAIAEIIPREVPNIEKRRGKKDADKNPSVVVVRGPKPGKPTDLSRMRQILLKLKQTPLPHMMHPPLEPAKDSKDGKDTKEGTKSEGK

Query:  DDVEDKEAPMSPAEDMDANDTPDRPEIEVEAPTTTDAVQTVELVSRSAE
        DDVEDKEAPMSPAEDMDANDTPDRPEIEVEAPTTTDAVQTVELVSRSAE
Subjt:  DDVEDKEAPMSPAEDMDANDTPDRPEIEVEAPTTTDAVQTVELVSRSAE

XP_008448281.1 PREDICTED: clathrin light chain 1 [Cucumis melo]3.3e-12564.82Show/hide
Query:  MASFDAFGNEEHEEQ-RRHSPTTPPFDDDAYMGYDSSLPSHRYDSSTAF------STADQLPH------EDDVVSDVHSAGNTTNPNLSDVYDFGVSDPN
        MASFDAF NEEHE+Q   HSPT  PFDDD YMGYDS LPS  YDSST F      S A+Q P       EDDV+SD+H+ GNTT PNLSD YDFGVS+PN
Subjt:  MASFDAFGNEEHEEQ-RRHSPTTPPFDDDAYMGYDSSLPSHRYDSSTAF------STADQLPH------EDDVVSDVHSAGNTTNPNLSDVYDFGVSDPN

Query:  PSYVSPFDHVEADGEHYNVA----GSLGGIDNGGIFVSDGPILPDPSEMGEDGHARREWRRQNAIDLEEKQKKEKEMRNQIMNEAEEYKASFDEKRKANC
        P YVSPFD V+AD +H N A    G  GG D+GG+FVSDGP+LPDPSEM E+G+ARREWRRQNAIDLEEK+KKEKE+RNQI+NEAEEYKASF EKR+ NC
Subjt:  PSYVSPFDHVEADGEHYNVA----GSLGGIDNGGIFVSDGPILPDPSEMGEDGHARREWRRQNAIDLEEKQKKEKEMRNQIMNEAEEYKASFDEKRKANC

Query:  ETNRTHNREREKLYLINQERFHKEAHKHYWKAIAEIIPREVPNIEKRRGKKDADKNPSVVVVRGPKPGKPTDLSRMRQILLKLKQTPLPHMMHPPLEPA-
        ETN+ HNREREKLY  NQERFHKEA KHYWKAIAEIIPREVPNIEKRRGKKD D  PS+VVV+GPKPGKPTDLSRMRQILLKLKQTP PHMM PP + A 
Subjt:  ETNRTHNREREKLYLINQERFHKEAHKHYWKAIAEIIPREVPNIEKRRGKKDADKNPSVVVVRGPKPGKPTDLSRMRQILLKLKQTPLPHMMHPPLEPA-

Query:  ----------------------KDSKDGKDTKEG-----------------TKSEGKDDVEDKEA--------PMSPAEDMDANDTPDRPEIEVEA-PTT
                              KDSKDGKDTKEG                  K EGK +V++K+A        P SPA +MDAN TPD+P IEVEA P  
Subjt:  ----------------------KDSKDGKDTKEG-----------------TKSEGKDDVEDKEA--------PMSPAEDMDANDTPDRPEIEVEA-PTT

Query:  TDAVQTVELVSRSAE
         D+ Q V LVS SAE
Subjt:  TDAVQTVELVSRSAE

XP_022943727.1 clathrin light chain 1-like [Cucurbita moschata]4.5e-18396.56Show/hide
Query:  MASFDAFGNEEHEEQRRHSPTTPPFDDDAYMGYDSSLPSHRYDSSTAFSTADQLPHEDDVVSDVHSAGNTTNPNLSDVYDFGVSDPNPSYVSPFDHVEAD
        MASFDAFGNEEHEEQRRHSPTTPPFDDDAYMGYDSSLPSHRYDSST FSTADQLPHEDDVVSDVHSAGNTTNPNLSDVYDFGVSDPNPSYVSPFDHVEAD
Subjt:  MASFDAFGNEEHEEQRRHSPTTPPFDDDAYMGYDSSLPSHRYDSSTAFSTADQLPHEDDVVSDVHSAGNTTNPNLSDVYDFGVSDPNPSYVSPFDHVEAD

Query:  GEHYNVAGSLGGIDNGGIFVSDGPILPDPSEMGEDGHARREWRRQNAIDLEEKQKKEKEMRNQIMNEAEEYKASFDEKRKANCETNRTHNREREKLYLIN
        GEHYNVA SLGGIDNGGIFVSDGPILPDPSEM EDGHARREWRRQNAIDLEEKQKKEKEMRNQIMNEAEEYKASF EKR+ANCETNRTHNREREKLYLIN
Subjt:  GEHYNVAGSLGGIDNGGIFVSDGPILPDPSEMGEDGHARREWRRQNAIDLEEKQKKEKEMRNQIMNEAEEYKASFDEKRKANCETNRTHNREREKLYLIN

Query:  QERFHKEAHKHYWKAIAEIIPREVPNIEKRRGKKDADKNPSVVVVRGPKPGKPTDLSRMRQILLKLKQTPLPHMMHPPLEPAKDSKDGKDTKEGTKSEGK
        QERFHKEAHKHYWKAIAEIIPREVPNIEKRRGKKDADK+PSVVVV+GPKPGKPTDLSRMRQILLKLKQTP PHMM PP EPAKDSKDGKDTKEG KSEGK
Subjt:  QERFHKEAHKHYWKAIAEIIPREVPNIEKRRGKKDADKNPSVVVVRGPKPGKPTDLSRMRQILLKLKQTPLPHMMHPPLEPAKDSKDGKDTKEGTKSEGK

Query:  DDVEDKEAPMSPAEDMDANDTPDRPEIEVEAPTTTDAVQTVELVSRSAE
         DVEDKEAPMSPAEDMDANDTPDRPEIEVEAPTTTDAVQTVELVSRSAE
Subjt:  DDVEDKEAPMSPAEDMDANDTPDRPEIEVEAPTTTDAVQTVELVSRSAE

TrEMBL top hitse value%identityAlignment
A0A1S3BJB2 Clathrin light chain1.6e-12564.82Show/hide
Query:  MASFDAFGNEEHEEQ-RRHSPTTPPFDDDAYMGYDSSLPSHRYDSSTAF------STADQLPH------EDDVVSDVHSAGNTTNPNLSDVYDFGVSDPN
        MASFDAF NEEHE+Q   HSPT  PFDDD YMGYDS LPS  YDSST F      S A+Q P       EDDV+SD+H+ GNTT PNLSD YDFGVS+PN
Subjt:  MASFDAFGNEEHEEQ-RRHSPTTPPFDDDAYMGYDSSLPSHRYDSSTAF------STADQLPH------EDDVVSDVHSAGNTTNPNLSDVYDFGVSDPN

Query:  PSYVSPFDHVEADGEHYNVA----GSLGGIDNGGIFVSDGPILPDPSEMGEDGHARREWRRQNAIDLEEKQKKEKEMRNQIMNEAEEYKASFDEKRKANC
        P YVSPFD V+AD +H N A    G  GG D+GG+FVSDGP+LPDPSEM E+G+ARREWRRQNAIDLEEK+KKEKE+RNQI+NEAEEYKASF EKR+ NC
Subjt:  PSYVSPFDHVEADGEHYNVA----GSLGGIDNGGIFVSDGPILPDPSEMGEDGHARREWRRQNAIDLEEKQKKEKEMRNQIMNEAEEYKASFDEKRKANC

Query:  ETNRTHNREREKLYLINQERFHKEAHKHYWKAIAEIIPREVPNIEKRRGKKDADKNPSVVVVRGPKPGKPTDLSRMRQILLKLKQTPLPHMMHPPLEPA-
        ETN+ HNREREKLY  NQERFHKEA KHYWKAIAEIIPREVPNIEKRRGKKD D  PS+VVV+GPKPGKPTDLSRMRQILLKLKQTP PHMM PP + A 
Subjt:  ETNRTHNREREKLYLINQERFHKEAHKHYWKAIAEIIPREVPNIEKRRGKKDADKNPSVVVVRGPKPGKPTDLSRMRQILLKLKQTPLPHMMHPPLEPA-

Query:  ----------------------KDSKDGKDTKEG-----------------TKSEGKDDVEDKEA--------PMSPAEDMDANDTPDRPEIEVEA-PTT
                              KDSKDGKDTKEG                  K EGK +V++K+A        P SPA +MDAN TPD+P IEVEA P  
Subjt:  ----------------------KDSKDGKDTKEG-----------------TKSEGKDDVEDKEA--------PMSPAEDMDANDTPDRPEIEVEA-PTT

Query:  TDAVQTVELVSRSAE
         D+ Q V LVS SAE
Subjt:  TDAVQTVELVSRSAE

A0A5A7V8R6 Clathrin light chain4.2e-12664.9Show/hide
Query:  MASFDAFGNEEHEEQ-RRHSPTTPPFDDDAYMGYDSSLPSHRYDSSTAF------STADQLPH------EDDVVSDVHSAGNTTNPNLSDVYDFGVSDPN
        MASFDAF NEEHE+Q   HSPT  PFDDD YMGYDS LPS  YDSST F      S A+Q P       EDDV+SD+H+ GNTT PNLSD YDFGVS+PN
Subjt:  MASFDAFGNEEHEEQ-RRHSPTTPPFDDDAYMGYDSSLPSHRYDSSTAF------STADQLPH------EDDVVSDVHSAGNTTNPNLSDVYDFGVSDPN

Query:  PSYVSPFDHVEADGEHYNVA----GSLGGIDNGGIFVSDGPILPDPSEMGEDGHARREWRRQNAIDLEEKQKKEKEMRNQIMNEAEEYKASFDEKRKANC
        P YVSPFD V+AD +H N A    G  GG D+GG+FVSDGP+LPDPSEM E+G+ARREWRRQNAIDLEEK+KKEKEMRNQI+NEAEEYKASF EKR+ NC
Subjt:  PSYVSPFDHVEADGEHYNVA----GSLGGIDNGGIFVSDGPILPDPSEMGEDGHARREWRRQNAIDLEEKQKKEKEMRNQIMNEAEEYKASFDEKRKANC

Query:  ETNRTHNREREKLYLINQERFHKEAHKHYWKAIAEIIPREVPNIEKRRGKKDADKNPSVVVVRGPKPGKPTDLSRMRQILLKLKQTPLPHMMHPPLEPA-
        ETN+ HNREREKLY  NQERFHKEA KHYWKAIAEIIPREVPNIEKRRGKKD D  PS+VVV+GPKPGKPTDLSRMRQILLKLKQTP PHMM PP + A 
Subjt:  ETNRTHNREREKLYLINQERFHKEAHKHYWKAIAEIIPREVPNIEKRRGKKDADKNPSVVVVRGPKPGKPTDLSRMRQILLKLKQTPLPHMMHPPLEPA-

Query:  ----------------------KDSKDGKDTKEG-----------------TKSEGKDDVEDKEA--------PMSPAEDMDANDTPDRPEIEVEA--PT
                              KDSKDGKDTKEG                  K EGK +V++K+A        P SPA +MDAN TPD+P IEVEA  P 
Subjt:  ----------------------KDSKDGKDTKEG-----------------TKSEGKDDVEDKEA--------PMSPAEDMDANDTPDRPEIEVEA--PT

Query:  TTDAVQTVELVSRSAE
          D+ Q V LVS SAE
Subjt:  TTDAVQTVELVSRSAE

A0A5D3C0Z6 Clathrin light chain1.6e-12564.82Show/hide
Query:  MASFDAFGNEEHEEQ-RRHSPTTPPFDDDAYMGYDSSLPSHRYDSSTAF------STADQLPH------EDDVVSDVHSAGNTTNPNLSDVYDFGVSDPN
        MASFDAF NEEHE+Q   HSPT  PFDDD YMGYDS LPS  YDSST F      S A+Q P       EDDV+SD+H+ GNTT PNLSD YDFGVS+PN
Subjt:  MASFDAFGNEEHEEQ-RRHSPTTPPFDDDAYMGYDSSLPSHRYDSSTAF------STADQLPH------EDDVVSDVHSAGNTTNPNLSDVYDFGVSDPN

Query:  PSYVSPFDHVEADGEHYNVA----GSLGGIDNGGIFVSDGPILPDPSEMGEDGHARREWRRQNAIDLEEKQKKEKEMRNQIMNEAEEYKASFDEKRKANC
        P YVSPFD V+AD +H N A    G  GG D+GG+FVSDGP+LPDPSEM E+G+ARREWRRQNAIDLEEK+KKEKE+RNQI+NEAEEYKASF EKR+ NC
Subjt:  PSYVSPFDHVEADGEHYNVA----GSLGGIDNGGIFVSDGPILPDPSEMGEDGHARREWRRQNAIDLEEKQKKEKEMRNQIMNEAEEYKASFDEKRKANC

Query:  ETNRTHNREREKLYLINQERFHKEAHKHYWKAIAEIIPREVPNIEKRRGKKDADKNPSVVVVRGPKPGKPTDLSRMRQILLKLKQTPLPHMMHPPLEPA-
        ETN+ HNREREKLY  NQERFHKEA KHYWKAIAEIIPREVPNIEKRRGKKD D  PS+VVV+GPKPGKPTDLSRMRQILLKLKQTP PHMM PP + A 
Subjt:  ETNRTHNREREKLYLINQERFHKEAHKHYWKAIAEIIPREVPNIEKRRGKKDADKNPSVVVVRGPKPGKPTDLSRMRQILLKLKQTPLPHMMHPPLEPA-

Query:  ----------------------KDSKDGKDTKEG-----------------TKSEGKDDVEDKEA--------PMSPAEDMDANDTPDRPEIEVEA-PTT
                              KDSKDGKDTKEG                  K EGK +V++K+A        P SPA +MDAN TPD+P IEVEA P  
Subjt:  ----------------------KDSKDGKDTKEG-----------------TKSEGKDDVEDKEA--------PMSPAEDMDANDTPDRPEIEVEA-PTT

Query:  TDAVQTVELVSRSAE
         D+ Q V LVS SAE
Subjt:  TDAVQTVELVSRSAE

A0A6J1CGW6 Clathrin light chain3.6e-12564.14Show/hide
Query:  MASFDAFGNEEHEEQRRHSPTTPPFDDDAYMGYDSSLPSHRYDSSTAF------STADQLPH------EDDVVSDVHSAGNTTNPNLSDVYDFGVSDPNP
        MASFDAF N+EH++Q+ HSPTT PFDDD ++GYDS LPS RYDSST F      S+ADQLP       E+DVVSDVH+A NT  PNLSDVYDFG SDPNP
Subjt:  MASFDAFGNEEHEEQRRHSPTTPPFDDDAYMGYDSSLPSHRYDSSTAF------STADQLPH------EDDVVSDVHSAGNTTNPNLSDVYDFGVSDPNP

Query:  SYVSPFDHVEADGEHYNVAGS-LGGIDNGGIFVSDGPILPDPSEMGEDGHARREWRRQNAIDLEEKQKKEKEMRNQIMNEAEEYKASFDEKRKANCETNR
         YVSPFD ++ADG+H N A + +GGID+GGIF SDGP+LPDPSEM E+G+ARREWRRQNAIDLEEK+KKEKEMRNQI+NEAEEYKASF EKR+ NCETN+
Subjt:  SYVSPFDHVEADGEHYNVAGS-LGGIDNGGIFVSDGPILPDPSEMGEDGHARREWRRQNAIDLEEKQKKEKEMRNQIMNEAEEYKASFDEKRKANCETNR

Query:  THNREREKLYLINQERFHKEAHKHYWKAIAEIIPREVPNIEKRRGKKDADKNPSVVVVRGPKPGKPTDLSRMRQILLKLKQTPLPHMMHPPLEPAKDSKD
         HNREREKLYL NQE+FHKEA KH+WKAIAEIIPREVPNIEKRRGKKDA+  PS+VV++GPKPGKPTDL+RMRQILLKLKQTP PHMM PP +PAKD KD
Subjt:  THNREREKLYLINQERFHKEAHKHYWKAIAEIIPREVPNIEKRRGKKDADKNPSVVVVRGPKPGKPTDLSRMRQILLKLKQTPLPHMMHPPLEPAKDSKD

Query:  GKDTKEGTK----------------SEGKDD---------------------VEDKEA---------PMSPAEDMDANDTPDRPEIEVEAPTTTDA
        GKD K+                    EGK+D                     V+DK+A         P SPA+++DAN TP +P+ E+EA T   A
Subjt:  GKDTKEGTK----------------SEGKDD---------------------VEDKEA---------PMSPAEDMDANDTPDRPEIEVEAPTTTDA

A0A6J1FTU8 Clathrin light chain2.2e-18396.56Show/hide
Query:  MASFDAFGNEEHEEQRRHSPTTPPFDDDAYMGYDSSLPSHRYDSSTAFSTADQLPHEDDVVSDVHSAGNTTNPNLSDVYDFGVSDPNPSYVSPFDHVEAD
        MASFDAFGNEEHEEQRRHSPTTPPFDDDAYMGYDSSLPSHRYDSST FSTADQLPHEDDVVSDVHSAGNTTNPNLSDVYDFGVSDPNPSYVSPFDHVEAD
Subjt:  MASFDAFGNEEHEEQRRHSPTTPPFDDDAYMGYDSSLPSHRYDSSTAFSTADQLPHEDDVVSDVHSAGNTTNPNLSDVYDFGVSDPNPSYVSPFDHVEAD

Query:  GEHYNVAGSLGGIDNGGIFVSDGPILPDPSEMGEDGHARREWRRQNAIDLEEKQKKEKEMRNQIMNEAEEYKASFDEKRKANCETNRTHNREREKLYLIN
        GEHYNVA SLGGIDNGGIFVSDGPILPDPSEM EDGHARREWRRQNAIDLEEKQKKEKEMRNQIMNEAEEYKASF EKR+ANCETNRTHNREREKLYLIN
Subjt:  GEHYNVAGSLGGIDNGGIFVSDGPILPDPSEMGEDGHARREWRRQNAIDLEEKQKKEKEMRNQIMNEAEEYKASFDEKRKANCETNRTHNREREKLYLIN

Query:  QERFHKEAHKHYWKAIAEIIPREVPNIEKRRGKKDADKNPSVVVVRGPKPGKPTDLSRMRQILLKLKQTPLPHMMHPPLEPAKDSKDGKDTKEGTKSEGK
        QERFHKEAHKHYWKAIAEIIPREVPNIEKRRGKKDADK+PSVVVV+GPKPGKPTDLSRMRQILLKLKQTP PHMM PP EPAKDSKDGKDTKEG KSEGK
Subjt:  QERFHKEAHKHYWKAIAEIIPREVPNIEKRRGKKDADKNPSVVVVRGPKPGKPTDLSRMRQILLKLKQTPLPHMMHPPLEPAKDSKDGKDTKEGTKSEGK

Query:  DDVEDKEAPMSPAEDMDANDTPDRPEIEVEAPTTTDAVQTVELVSRSAE
         DVEDKEAPMSPAEDMDANDTPDRPEIEVEAPTTTDAVQTVELVSRSAE
Subjt:  DDVEDKEAPMSPAEDMDANDTPDRPEIEVEAPTTTDAVQTVELVSRSAE

SwissProt top hitse value%identityAlignment
O04209 Clathrin light chain 24.9e-4756.5Show/hide
Query:  GGIDNG-GIFVS----DGPILPDPSEM-GEDGHARREWRRQNAIDLEEKQKKEKEMRNQIMNEAEEYKASFDEKRKANCETNRTHNREREKLYLINQERF
        G   NG GIF S    DGPILP PSEM  ++G A REWRRQNAI LEEK+K+EKE+  QI+ EA++YK  F +K +  CE N+  NRE+EKLYL NQE+F
Subjt:  GGIDNG-GIFVS----DGPILPDPSEM-GEDGHARREWRRQNAIDLEEKQKKEKEMRNQIMNEAEEYKASFDEKRKANCETNRTHNREREKLYLINQERF

Query:  HKEAHKHYWKAIAEIIPREVPNIEKRRGKKDAD--KNPSVVVVRGPKPGKPTDLSRMRQILLKLKQTPLPHM---MHPPLE----PAKDSKDGKDTKEGT
        + E+ K+YWKAIAE++P+EVP IEKRRGKK+    K P+V V++GPKPGKPTDL+RMRQIL+KLK  P  H+     PP E    P K+  + K T+  T
Subjt:  HKEAHKHYWKAIAEIIPREVPNIEKRRGKKDAD--KNPSVVVVRGPKPGKPTDLSRMRQILLKLKQTPLPHM---MHPPLE----PAKDSKDGKDTKEGT

Q5Z402 Clathrin light chain 22.9e-5544.85Show/hide
Query:  SPTTPPFDDDAYMGYDSSLPSHRYDSSTAFSTADQLPHEDDVVSDVHSAGNTTNPNLSDVYDFGVSDPNPSYVSPFDHVEADGEHYNVAGSLGGIDNGGI
        SP   PFDDD+++ +D++ P        A + AD  P                     + Y F      P   SPF   EA+G  ++   +    DN   
Subjt:  SPTTPPFDDDAYMGYDSSLPSHRYDSSTAFSTADQLPHEDDVVSDVHSAGNTTNPNLSDVYDFGVSDPNPSYVSPFDHVEADGEHYNVAGSLGGIDNGGI

Query:  FVSDGPILPDPSEMGED-GHARREWRRQNAIDLEEKQKKEKEMRNQIMNEAEEYKASFDEKRKANCETNRTHNREREKLYLINQERFHKEAHKHYWKAIA
            GP+LP P++MG D G   REWRRQNAI LEEK+KKEKEMRNQI+ +A+E+K +F EKRK N ET++  NREREKLYL NQE+FH  A K YWKAI+
Subjt:  FVSDGPILPDPSEMGED-GHARREWRRQNAIDLEEKQKKEKEMRNQIMNEAEEYKASFDEKRKANCETNRTHNREREKLYLINQERFHKEAHKHYWKAIA

Query:  EIIPREVPNIEKRRGKKDAD--KNPSVVVVRGPKPGKPTDLSRMRQILLKLKQTPLPHMMHPPLEPAKDSKDGKDTKEGTKSEGKDDVEDKEAPMSPAED
        E+IP E+ NIEKR  KKD D  K P +VV++GPKPGKPTD+SRMRQILLKLK TP PHM  PP   A   KDG   K+G K             ++ A  
Subjt:  EIIPREVPNIEKRRGKKDAD--KNPSVVVVRGPKPGKPTDLSRMRQILLKLKQTPLPHMMHPPLEPAKDSKDGKDTKEGTKSEGKDDVEDKEAPMSPAED

Query:  MDANDTPDRPEIEVEAPTTTDAVQTVELVS
         DA+     PE+E  A     A    E ++
Subjt:  MDANDTPDRPEIEVEAPTTTDAVQTVELVS

Q6Z3A8 Clathrin light chain 35.6e-5143.18Show/hide
Query:  MASFDAFGNEEHEEQRRHSPTTP--PFD---DDAYMGYDSSLPSHRYDSSTAFSTADQLPHEDDV----------VSDVHSAGNTTNPNLSDVYDFGVSD
        M+SFD+      +         P  PFD   D A  G  +    HR+  +T++S+      EDD+          V      G+++N   +  Y  G  D
Subjt:  MASFDAFGNEEHEEQRRHSPTTP--PFD---DDAYMGYDSSLPSHRYDSSTAFSTADQLPHEDDV----------VSDVHSAGNTTNPNLSDVYDFGVSD

Query:  PNPSYVSPFDHVEADGEHYNVAGSLGGIDN----GGIFVSDGPILPDPSEMGEDGHARREWRRQNAIDLEEKQKKEKEMRNQIMNEAEEYKASFDEKRKA
            +V     V   G    V G  GGID+    G     DGP+LP P  M E+G  RREWRRQNA+ LEEK++KE+E R +I+ EA+E+K SF EKRK 
Subjt:  PNPSYVSPFDHVEADGEHYNVAGSLGGIDN----GGIFVSDGPILPDPSEMGEDGHARREWRRQNAIDLEEKQKKEKEMRNQIMNEAEEYKASFDEKRKA

Query:  NCETNRTHNREREKLYLINQERFHKEAHKHYWKAIAEIIPREVPNIE---KRRGKKDAD-----KNPSVVVVRGPKPGKPTDLSRMRQILLKLKQTPLPH
        N +TNR  NR+REKL+L  QE+FH EA K YWKAIAE++P E+P +E   KRR K+ A+     K P VVVV+G KPGKPTDLSRMRQ+L+KLKQTP PH
Subjt:  NCETNRTHNREREKLYLINQERFHKEAHKHYWKAIAEIIPREVPNIE---KRRGKKDAD-----KNPSVVVVRGPKPGKPTDLSRMRQILLKLKQTPLPH

Query:  MMHPPLEPAKD-------SKDGKDTKEGTKSEGKDDVEDKEAPMSP------AEDMDAN
        M  PP +PAKD       +KDG+  K   + E K    +KEA   P      A D  AN
Subjt:  MMHPPLEPAKD-------SKDGKDTKEGTKSEGKDDVEDKEAPMSP------AEDMDAN

Q7XKE9 Clathrin light chain 11.0e-5249.15Show/hide
Query:  ADQLPH--------EDDVVSDVH---SAGNTTNPNLSDVYDFGVSDPNPSYVSPFDHVEADGEHYNVAGSLGGID----------NGGIFVSDGPILPDP
        AD+LP         +DD   D     +A +T     +   D GV D         + +  + E   +    GG            +GG    DGPILP P
Subjt:  ADQLPH--------EDDVVSDVH---SAGNTTNPNLSDVYDFGVSDPNPSYVSPFDHVEADGEHYNVAGSLGGID----------NGGIFVSDGPILPDP

Query:  SEMG-EDGHARREWRRQNAIDLEEKQKKEKEMRNQIMNEAEEYKASFDEKRKANCETNRTHNREREKLYLINQERFHKEAHKHYWKAIAEIIPREVPNIE
        ++MG E+G   REWRRQNAI LEEK++KEKE+R QI+ EAEE+K +F EKR  NCETN+ HNREREK+++  QE+FH EA K YWK+I+E+IP E+  IE
Subjt:  SEMG-EDGHARREWRRQNAIDLEEKQKKEKEMRNQIMNEAEEYKASFDEKRKANCETNRTHNREREKLYLINQERFHKEAHKHYWKAIAEIIPREVPNIE

Query:  KRRGKKDADKNPSVVVVRGPKPGKPTDLSRMRQILLKLKQTPLPHMMHPPLEPAKDSKDG-KD-TKEGTKSEG---KDDVEDKEAPM--SPAE
        K RGKKD DK PS+ V++GPKPGKPTDLSRMRQIL+KLK  P PHMM PP  PA  +KDG KD  K+GT +     K   E KE P   SPAE
Subjt:  KRRGKKDADKNPSVVVVRGPKPGKPTDLSRMRQILLKLKQTPLPHMMHPPLEPAKDSKDG-KD-TKEGTKSEG---KDDVEDKEAPM--SPAE

Q9SKU1 Clathrin light chain 11.1e-7056.06Show/hide
Query:  FDDDAYMGYDSSLPSHR-YDSSTAFSTADQLPHEDDVVSDVHSAGNTTNPNLSDVYDFGVSDPNPSYVSPFDHVEADGEHYNVAGSLGGIDNGGIFVSDG
        FDD  +     S   H  +     FS A Q P +          G+  +PN    Y FG S PN  + SPF+    D       G+ GG     IF SDG
Subjt:  FDDDAYMGYDSSLPSHR-YDSSTAFSTADQLPHEDDVVSDVHSAGNTTNPNLSDVYDFGVSDPNPSYVSPFDHVEADGEHYNVAGSLGGIDNGGIFVSDG

Query:  PILPDPSEMGEDGHARREWRRQNAIDLEEKQKKEKEMRNQIMNEAEEYKASFDEKRKANCETNRTHNREREKLYLINQERFHKEAHKHYWKAIAEIIPRE
        PILPDP+EM E+G  RREWRR N I LEEK+KKEKEMRNQI+ EAE++K +F EKR    ETN+T NRE+EKLY  NQE+FHKE  KHYWKAIAE+IPRE
Subjt:  PILPDPSEMGEDGHARREWRRQNAIDLEEKQKKEKEMRNQIMNEAEEYKASFDEKRKANCETNRTHNREREKLYLINQERFHKEAHKHYWKAIAEIIPRE

Query:  VPNIEKRRGKKDADKNPSVVVVRGPKPGKPTDLSRMRQILLKLKQTPLPHMMHPPLEPAKDSKDGKDTKEG----TKSEGKDDVEDKEA
        VPNIEK+RGKKD DK PSV V++GPKPGKPTDL RMRQI LKLK  P PHMM PP  PAKD+KDGKD K+G    T  +GKD    K+A
Subjt:  VPNIEKRRGKKDADKNPSVVVVRGPKPGKPTDLSRMRQILLKLKQTPLPHMMHPPLEPAKDSKDGKDTKEG----TKSEGKDDVEDKEA

Arabidopsis top hitse value%identityAlignment
AT2G20760.1 Clathrin light chain protein7.7e-7256.06Show/hide
Query:  FDDDAYMGYDSSLPSHR-YDSSTAFSTADQLPHEDDVVSDVHSAGNTTNPNLSDVYDFGVSDPNPSYVSPFDHVEADGEHYNVAGSLGGIDNGGIFVSDG
        FDD  +     S   H  +     FS A Q P +          G+  +PN    Y FG S PN  + SPF+    D       G+ GG     IF SDG
Subjt:  FDDDAYMGYDSSLPSHR-YDSSTAFSTADQLPHEDDVVSDVHSAGNTTNPNLSDVYDFGVSDPNPSYVSPFDHVEADGEHYNVAGSLGGIDNGGIFVSDG

Query:  PILPDPSEMGEDGHARREWRRQNAIDLEEKQKKEKEMRNQIMNEAEEYKASFDEKRKANCETNRTHNREREKLYLINQERFHKEAHKHYWKAIAEIIPRE
        PILPDP+EM E+G  RREWRR N I LEEK+KKEKEMRNQI+ EAE++K +F EKR    ETN+T NRE+EKLY  NQE+FHKE  KHYWKAIAE+IPRE
Subjt:  PILPDPSEMGEDGHARREWRRQNAIDLEEKQKKEKEMRNQIMNEAEEYKASFDEKRKANCETNRTHNREREKLYLINQERFHKEAHKHYWKAIAEIIPRE

Query:  VPNIEKRRGKKDADKNPSVVVVRGPKPGKPTDLSRMRQILLKLKQTPLPHMMHPPLEPAKDSKDGKDTKEG----TKSEGKDDVEDKEA
        VPNIEK+RGKKD DK PSV V++GPKPGKPTDL RMRQI LKLK  P PHMM PP  PAKD+KDGKD K+G    T  +GKD    K+A
Subjt:  VPNIEKRRGKKDADKNPSVVVVRGPKPGKPTDLSRMRQILLKLKQTPLPHMMHPPLEPAKDSKDGKDTKEG----TKSEGKDDVEDKEA

AT2G40060.1 Clathrin light chain protein3.5e-4856.5Show/hide
Query:  GGIDNG-GIFVS----DGPILPDPSEM-GEDGHARREWRRQNAIDLEEKQKKEKEMRNQIMNEAEEYKASFDEKRKANCETNRTHNREREKLYLINQERF
        G   NG GIF S    DGPILP PSEM  ++G A REWRRQNAI LEEK+K+EKE+  QI+ EA++YK  F +K +  CE N+  NRE+EKLYL NQE+F
Subjt:  GGIDNG-GIFVS----DGPILPDPSEM-GEDGHARREWRRQNAIDLEEKQKKEKEMRNQIMNEAEEYKASFDEKRKANCETNRTHNREREKLYLINQERF

Query:  HKEAHKHYWKAIAEIIPREVPNIEKRRGKKDAD--KNPSVVVVRGPKPGKPTDLSRMRQILLKLKQTPLPHM---MHPPLE----PAKDSKDGKDTKEGT
        + E+ K+YWKAIAE++P+EVP IEKRRGKK+    K P+V V++GPKPGKPTDL+RMRQIL+KLK  P  H+     PP E    P K+  + K T+  T
Subjt:  HKEAHKHYWKAIAEIIPREVPNIEKRRGKKDAD--KNPSVVVVRGPKPGKPTDLSRMRQILLKLKQTPLPHM---MHPPLE----PAKDSKDGKDTKEGT

AT3G51890.1 Clathrin light chain protein6.6e-3943.98Show/hide
Query:  DDDAYMGYDSSLPSHRYDSSTAFSTADQLPHEDDVVSDVHSAGNTTNPNLSDVYDFGVSDPNPSYVSPFDHVEADGEHYNVAGSLGGIDNGGIFVSDGPI
        D   +  Y+S   S R+DSS  FS  D  P ++                 SD+   G S P P   SP               S+   D+     ++  I
Subjt:  DDDAYMGYDSSLPSHRYDSSTAFSTADQLPHEDDVVSDVHSAGNTTNPNLSDVYDFGVSDPNPSYVSPFDHVEADGEHYNVAGSLGGIDNGGIFVSDGPI

Query:  LPDPSEM-GEDGHARREWRRQNAIDLEEKQKKEKEMRNQIMNEAEEYKASFDEKRKANCETNRTHNREREKLYLINQERFHKEAHKHYWKAIAEIIPREV
        LP PS M  E+G A REWRR NA+ LEEK+K+EKEM  QI+  AE+YKA F  KR    E N+  NRE+EK +L NQE+F+ EA K+ WKAIAE+IPREV
Subjt:  LPDPSEM-GEDGHARREWRRQNAIDLEEKQKKEKEMRNQIMNEAEEYKASFDEKRKANCETNRTHNREREKLYLINQERFHKEAHKHYWKAIAEIIPREV

Query:  PNIEKRRGKKDADKNPSVVVVRGPKPGKPTDLSRMRQILLKLKQTPLPHMMHPPLEPAKDSKDGKD
        P IE R  KK   K  ++ V++GPKPGKPTDLSRMRQ+L KLK  P  HM     +P   S  G D
Subjt:  PNIEKRRGKKDADKNPSVVVVRGPKPGKPTDLSRMRQILLKLKQTPLPHMMHPPLEPAKDSKDGKD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCTTCGACGCTTTCGGCAATGAAGAACACGAAGAACAGCGGCGCCATTCGCCTACAACGCCGCCCTTTGACGACGATGCCTACATGGGTTATGACTCTTCTCT
CCCTTCCCACCGTTATGATTCTTCTACCGCTTTCTCTACCGCCGACCAACTCCCTCATGAAGACGACGTCGTTTCCGATGTCCACAGCGCCGGAAACACCACTAATCCTA
ATTTATCCGACGTTTACGACTTCGGAGTTTCGGATCCTAATCCGAGCTACGTATCTCCCTTTGATCATGTTGAGGCTGATGGAGAGCATTACAATGTTGCCGGCAGCCTT
GGTGGTATTGACAATGGCGGTATTTTTGTCTCCGATGGACCGATTCTCCCCGACCCGAGCGAAATGGGAGAGGATGGCCATGCTCGACGCGAATGGCGACGACAAAACGC
CATAGATCTTGAGGAGAAACAGAAGAAAGAAAAGGAGATGAGGAATCAAATAATGAATGAAGCTGAAGAGTATAAAGCATCCTTTGATGAGAAAAGGAAGGCCAATTGTG
AAACAAATAGAACTCACAATAGAGAAAGAGAGAAGCTTTACCTAATAAACCAGGAAAGATTCCACAAAGAAGCTCACAAACATTACTGGAAAGCAATAGCAGAAATCATC
CCACGAGAGGTACCTAATATTGAGAAGAGAAGAGGAAAGAAAGATGCTGATAAGAATCCTTCAGTCGTGGTAGTTCGAGGTCCGAAACCTGGAAAACCGACCGATCTATC
TCGAATGAGGCAGATTCTTTTGAAGTTGAAACAGACCCCTCTGCCTCATATGATGCATCCTCCTCTCGAACCGGCCAAAGATAGCAAGGATGGCAAAGATACGAAGGAAG
GGACGAAATCCGAAGGGAAGGATGATGTTGAGGACAAGGAAGCTCCTATGTCTCCTGCAGAAGATATGGATGCTAATGATACTCCCGATCGACCCGAAATAGAGGTCGAG
GCTCCTACTACAACCGATGCCGTGCAAACTGTTGAGTTGGTGTCACGTTCTGCAGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCTTCGACGCTTTCGGCAATGAAGAACACGAAGAACAGCGGCGCCATTCGCCTACAACGCCGCCCTTTGACGACGATGCCTACATGGGTTATGACTCTTCTCT
CCCTTCCCACCGTTATGATTCTTCTACCGCTTTCTCTACCGCCGACCAACTCCCTCATGAAGACGACGTCGTTTCCGATGTCCACAGCGCCGGAAACACCACTAATCCTA
ATTTATCCGACGTTTACGACTTCGGAGTTTCGGATCCTAATCCGAGCTACGTATCTCCCTTTGATCATGTTGAGGCTGATGGAGAGCATTACAATGTTGCCGGCAGCCTT
GGTGGTATTGACAATGGCGGTATTTTTGTCTCCGATGGACCGATTCTCCCCGACCCGAGCGAAATGGGAGAGGATGGCCATGCTCGACGCGAATGGCGACGACAAAACGC
CATAGATCTTGAGGAGAAACAGAAGAAAGAAAAGGAGATGAGGAATCAAATAATGAATGAAGCTGAAGAGTATAAAGCATCCTTTGATGAGAAAAGGAAGGCCAATTGTG
AAACAAATAGAACTCACAATAGAGAAAGAGAGAAGCTTTACCTAATAAACCAGGAAAGATTCCACAAAGAAGCTCACAAACATTACTGGAAAGCAATAGCAGAAATCATC
CCACGAGAGGTACCTAATATTGAGAAGAGAAGAGGAAAGAAAGATGCTGATAAGAATCCTTCAGTCGTGGTAGTTCGAGGTCCGAAACCTGGAAAACCGACCGATCTATC
TCGAATGAGGCAGATTCTTTTGAAGTTGAAACAGACCCCTCTGCCTCATATGATGCATCCTCCTCTCGAACCGGCCAAAGATAGCAAGGATGGCAAAGATACGAAGGAAG
GGACGAAATCCGAAGGGAAGGATGATGTTGAGGACAAGGAAGCTCCTATGTCTCCTGCAGAAGATATGGATGCTAATGATACTCCCGATCGACCCGAAATAGAGGTCGAG
GCTCCTACTACAACCGATGCCGTGCAAACTGTTGAGTTGGTGTCACGTTCTGCAGAGTAA
Protein sequenceShow/hide protein sequence
MASFDAFGNEEHEEQRRHSPTTPPFDDDAYMGYDSSLPSHRYDSSTAFSTADQLPHEDDVVSDVHSAGNTTNPNLSDVYDFGVSDPNPSYVSPFDHVEADGEHYNVAGSL
GGIDNGGIFVSDGPILPDPSEMGEDGHARREWRRQNAIDLEEKQKKEKEMRNQIMNEAEEYKASFDEKRKANCETNRTHNREREKLYLINQERFHKEAHKHYWKAIAEII
PREVPNIEKRRGKKDADKNPSVVVVRGPKPGKPTDLSRMRQILLKLKQTPLPHMMHPPLEPAKDSKDGKDTKEGTKSEGKDDVEDKEAPMSPAEDMDANDTPDRPEIEVE
APTTTDAVQTVELVSRSAE