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Carg18452 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18452
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionFork head domain transcription factor slp2 like
Genome locationCarg_Chr20:933563..934192
RNA-Seq ExpressionCarg18452
SyntenyCarg18452
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570510.1 hypothetical protein SDJN03_29425, partial [Cucurbita argyrosperma subsp. sororia]2.1e-2695.89Show/hide
Query:  MKKSGFIAASVVAAAAAAAESASPSSSTIFCNLKVQLPRQEGKEGENPSSSADKFAPKFDGLKFIKTLVTAHR
        MKKSGFIAASVV   AAAAESASPSSSTIFCNLKVQLPRQEGKEGENPSSSADKFAPKFDGLKFIKTLVTAHR
Subjt:  MKKSGFIAASVVAAAAAAAESASPSSSTIFCNLKVQLPRQEGKEGENPSSSADKFAPKFDGLKFIKTLVTAHR

KAG7010372.1 hypothetical protein SDJN02_27165, partial [Cucurbita argyrosperma subsp. argyrosperma]6.0e-29100Show/hide
Query:  MKKSGFIAASVVAAAAAAAESASPSSSTIFCNLKVQLPRQEGKEGENPSSSADKFAPKFDGLKFIKTLVTAHR
        MKKSGFIAASVVAAAAAAAESASPSSSTIFCNLKVQLPRQEGKEGENPSSSADKFAPKFDGLKFIKTLVTAHR
Subjt:  MKKSGFIAASVVAAAAAAAESASPSSSTIFCNLKVQLPRQEGKEGENPSSSADKFAPKFDGLKFIKTLVTAHR

KAG7034915.1 hypothetical protein SDJN02_01708, partial [Cucurbita argyrosperma subsp. argyrosperma]8.7e-2082.43Show/hide
Query:  MKKSGFIAASVVAAAAAAAESASPSSSTIFCNLKVQLPRQEGKE-GENPSSSADKFAPKFDGLKFIKTLVTAHR
        MKKSGFIAASV AAAAA   SASPSSST+FC+ K+QLPRQE KE GEN SSSADKFAPKFDGL+FI+TLVTAHR
Subjt:  MKKSGFIAASVVAAAAAAAESASPSSSTIFCNLKVQLPRQEGKE-GENPSSSADKFAPKFDGLKFIKTLVTAHR

XP_022970726.1 uncharacterized protein LOC111469626 [Cucurbita maxima]1.1e-1981.08Show/hide
Query:  MKKSGFIAASVVAAAAAAAESASPSSSTIFCNLKVQLPRQEGKE-GENPSSSADKFAPKFDGLKFIKTLVTAHR
        MKKSGFIAAS+  AAA+AA SASPSSST+FC+ K+QLPRQE KE GEN SSSADKFAPKFDGL+FI+TLVTAHR
Subjt:  MKKSGFIAASVVAAAAAAAESASPSSSTIFCNLKVQLPRQEGKE-GENPSSSADKFAPKFDGLKFIKTLVTAHR

XP_038902353.1 uncharacterized protein LOC120088987 [Benincasa hispida]1.8e-2082.19Show/hide
Query:  MKKSGFIAASVVAAAAAAAESASPSSSTIFCNLKVQLPRQEGKEGENPSSSADKFAPKFDGLKFIKTLVTAHR
        MKKSGFIAASV    AAAA SASPSSST+ CN KVQ PRQEGKEGEN SSS DKFAPKFDGL+FI+TLVTAHR
Subjt:  MKKSGFIAASVVAAAAAAAESASPSSSTIFCNLKVQLPRQEGKEGENPSSSADKFAPKFDGLKFIKTLVTAHR

TrEMBL top hitse value%identityAlignment
A0A5B7ACG5 Uncharacterized protein (Fragment)3.0e-1060.76Show/hide
Query:  MKKSGFIAASVVAAAAAAAESASPSSSTIFCNLKVQLPRQE---GKEGENPSS---SADKFAPKFDGLKFIKTLVTAHR
        MKKSG +AASV AAA+A A SAS SSST   N K+Q+ R+E    K  EN SS   ++DKFAP+FDGL+FI+TLVT HR
Subjt:  MKKSGFIAASVVAAAAAAAESASPSSSTIFCNLKVQLPRQE---GKEGENPSS---SADKFAPKFDGLKFIKTLVTAHR

A0A5J5A2U7 Uncharacterized protein1.4e-1058.75Show/hide
Query:  MKKSGFIAASVVAAAAAAAESASPSSSTIFCNLKVQLPRQE---GKEGENPSSS----ADKFAPKFDGLKFIKTLVTAHR
        MKKSG +AASV AAA+A A S SPSS+++  N K+Q+ R+E    K  EN SS     +DKFAP+FDGL+FI+TLVTAHR
Subjt:  MKKSGFIAASVVAAAAAAAESASPSSSTIFCNLKVQLPRQE---GKEGENPSSS----ADKFAPKFDGLKFIKTLVTAHR

A0A6J1CHM8 uncharacterized protein LOC1110112581.0e-1879.45Show/hide
Query:  MKKSGFIAASVVAAAAAAAESASPSSSTIFCNLKVQLPRQEGKEGENPSSSADKFAPKFDGLKFIKTLVTAHR
        MKKS FIAASV  A A+AA SASPSSST  CN KVQ PRQEGK  EN SSSADKFAPKFDGL+FI+TLVTAHR
Subjt:  MKKSGFIAASVVAAAAAAAESASPSSSTIFCNLKVQLPRQEGKEGENPSSSADKFAPKFDGLKFIKTLVTAHR

A0A6J1I1D6 uncharacterized protein LOC1114696265.5e-2081.08Show/hide
Query:  MKKSGFIAASVVAAAAAAAESASPSSSTIFCNLKVQLPRQEGKE-GENPSSSADKFAPKFDGLKFIKTLVTAHR
        MKKSGFIAAS+  AAA+AA SASPSSST+FC+ K+QLPRQE KE GEN SSSADKFAPKFDGL+FI+TLVTAHR
Subjt:  MKKSGFIAASVVAAAAAAAESASPSSSTIFCNLKVQLPRQEGKE-GENPSSSADKFAPKFDGLKFIKTLVTAHR

E0CTD2 Uncharacterized protein3.2e-1262.5Show/hide
Query:  MKKSGFIAASVVAAAAAAAESASPSSSTIFCNLKVQLPRQE---GKEGENP----SSSADKFAPKFDGLKFIKTLVTAHR
        MKKSGF AASV AA+A A   ++PSSS   CN K+QL R E   GK+ EN     SSSAD+FAP+FDGL+FI+TLVTAHR
Subjt:  MKKSGFIAASVVAAAAAAAESASPSSSTIFCNLKVQLPRQE---GKEGENP----SSSADKFAPKFDGLKFIKTLVTAHR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G28290.1 unknown protein4.6e-1150Show/hide
Query:  MKKSGFIAASV-VAAAAAAAESASPSSSTIFCNLKVQLPRQEGKE------GENPSSSADKFAPKFDGLKFIKTLVTAHR
        MKK+G IAAS+ VAA+A A  + S ++S  F + +  L RQE KE      G +     +KFAP+FDGL+FI+TLVTAHR
Subjt:  MKKSGFIAASV-VAAAAAAAESASPSSSTIFCNLKVQLPRQEGKE------GENPSSSADKFAPKFDGLKFIKTLVTAHR

AT5G42110.1 unknown protein1.4e-0441.89Show/hide
Query:  MKKSGFIAASVVAAAAAAAESASPSSSTIFCNLKVQLPRQEGKEGEN-PSSSADKFAPKFDGLKFIKTLVTAHR
        MK S  + ASV+A + AA  S+S             LP    K  E+  ++ +D F P+FDGL+FI+TLVTAHR
Subjt:  MKKSGFIAASVVAAAAAAAESASPSSSTIFCNLKVQLPRQEGKEGEN-PSSSADKFAPKFDGLKFIKTLVTAHR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAATCGGGTTTCATCGCCGCCTCCGTCGTCGCCGCCGCCGCCGCCGCCGCCGAGTCTGCCTCCCCCAGTTCCTCCACCATTTTCTGCAACCTAAAAGTTCAGCT
CCCTCGGCAGGAGGGTAAGGAAGGCGAGAATCCGTCGTCCTCGGCGGATAAATTTGCTCCCAAATTTGATGGATTGAAATTTATTAAGACTCTGGTTACGGCTCACAGAT
AA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAATCGGGTTTCATCGCCGCCTCCGTCGTCGCCGCCGCCGCCGCCGCCGCCGAGTCTGCCTCCCCCAGTTCCTCCACCATTTTCTGCAACCTAAAAGTTCAGCT
CCCTCGGCAGGAGGGTAAGGAAGGCGAGAATCCGTCGTCCTCGGCGGATAAATTTGCTCCCAAATTTGATGGATTGAAATTTATTAAGACTCTGGTTACGGCTCACAGAT
AAACTTGCCCCGGGGAAGGTGACGGCGATGGCGTCGGCGATGGCCAGACTGAACTTCGTATACTGCCTTATTTTGTTTGTTATTTTTGTCGTCGAAACTCTCACATTTTG
CACATTCAAGATACCAAATTGAATAATAATTTTAGTTTAAAGTATTGATTTTTCTCGTCGAGAATCATTCACCGCTCCACACGTGGACTTGAAACGACAACTTTTCGAAG
TTCAAAAGTAGTGGCTGTTCGAAAATTAAGTCATAAAAAAGATGGGGAAAAAAAAAAAAAAAGAGCTTTTCTTTTGAATG
Protein sequenceShow/hide protein sequence
MKKSGFIAASVVAAAAAAAESASPSSSTIFCNLKVQLPRQEGKEGENPSSSADKFAPKFDGLKFIKTLVTAHR