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Carg18481 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18481
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionAUGMIN subunit 2-like
Genome locationCarg_Chr20:1097337..1098711
RNA-Seq ExpressionCarg18481
SyntenyCarg18481
Gene Ontology termsGO:0000278 - mitotic cell cycle (biological process)
GO:0000911 - cytokinesis by cell plate formation (biological process)
GO:0007020 - microtubule nucleation (biological process)
GO:0031023 - microtubule organizing center organization (biological process)
GO:0051225 - spindle assembly (biological process)
GO:1990498 - mitotic spindle microtubule (cellular component)
InterPro domainsIPR028346 - HAUS augmin-like complex subunit 2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570545.1 AUGMIN subunit 2, partial [Cucurbita argyrosperma subsp. sororia]7.8e-32100Show/hide
Query:  MSMGSDTTWVGKKPLRRIGGMSDALSIAADLGFSVSPPSQEDLQNISSATGEQGDDVIRVLRELAAVQRKIADLQ
        MSMGSDTTWVGKKPLRRIGGMSDALSIAADLGFSVSPPSQEDLQNISSATGEQGDDVIRVLRELAAVQRKIADLQ
Subjt:  MSMGSDTTWVGKKPLRRIGGMSDALSIAADLGFSVSPPSQEDLQNISSATGEQGDDVIRVLRELAAVQRKIADLQ
KAG7010401.1 AUGMIN subunit 2, partial [Cucurbita argyrosperma subsp. argyrosperma]7.8e-32100Show/hide
Query:  MSMGSDTTWVGKKPLRRIGGMSDALSIAADLGFSVSPPSQEDLQNISSATGEQGDDVIRVLRELAAVQRKIADLQ
        MSMGSDTTWVGKKPLRRIGGMSDALSIAADLGFSVSPPSQEDLQNISSATGEQGDDVIRVLRELAAVQRKIADLQ
Subjt:  MSMGSDTTWVGKKPLRRIGGMSDALSIAADLGFSVSPPSQEDLQNISSATGEQGDDVIRVLRELAAVQRKIADLQ
XP_022943387.1 AUGMIN subunit 2-like isoform X1 [Cucurbita moschata]1.1e-3098.67Show/hide
Query:  MSMGSDTTWVGKKPLRRIGGMSDALSIAADLGFSVSPPSQEDLQNISSATGEQGDDVIRVLRELAAVQRKIADLQ
        MSMGSDTTWVGKKPLRRIGGMSDALSIAADLGFSVS PSQEDLQNISSATGEQGDDVIRVLRELAAVQRKIADLQ
Subjt:  MSMGSDTTWVGKKPLRRIGGMSDALSIAADLGFSVSPPSQEDLQNISSATGEQGDDVIRVLRELAAVQRKIADLQ
XP_022943388.1 AUGMIN subunit 2-like isoform X2 [Cucurbita moschata]1.1e-3098.67Show/hide
Query:  MSMGSDTTWVGKKPLRRIGGMSDALSIAADLGFSVSPPSQEDLQNISSATGEQGDDVIRVLRELAAVQRKIADLQ
        MSMGSDTTWVGKKPLRRIGGMSDALSIAADLGFSVS PSQEDLQNISSATGEQGDDVIRVLRELAAVQRKIADLQ
Subjt:  MSMGSDTTWVGKKPLRRIGGMSDALSIAADLGFSVSPPSQEDLQNISSATGEQGDDVIRVLRELAAVQRKIADLQ
XP_022986019.1 AUGMIN subunit 2-like [Cucurbita maxima]3.9e-3197.33Show/hide
Query:  MSMGSDTTWVGKKPLRRIGGMSDALSIAADLGFSVSPPSQEDLQNISSATGEQGDDVIRVLRELAAVQRKIADLQ
        MSMGSDTTWVGKKPLRRIGGMSDALSIAADLGFSVSPPSQEDLQNIS+ATGEQGDD+IRVLRELAAVQRKIADLQ
Subjt:  MSMGSDTTWVGKKPLRRIGGMSDALSIAADLGFSVSPPSQEDLQNISSATGEQGDDVIRVLRELAAVQRKIADLQ
TrEMBL top hitse value%identityAlignment
A0A6J1DW74 AUGMIN subunit 2-like1.1e-2892.11Show/hide
Query:  MSMGSDTTWVGKKPLRRIGGMSDALSIAADLGFSVS-PPSQEDLQNISSATGEQGDDVIRVLRELAAVQRKIADLQ
        MSMGSDTTWVGKKPLRRIGGMSDALSIAADLGFSVS PPSQE+LQNISSATGE+GDD+I+VLREL AVQRKIADLQ
Subjt:  MSMGSDTTWVGKKPLRRIGGMSDALSIAADLGFSVS-PPSQEDLQNISSATGEQGDDVIRVLRELAAVQRKIADLQ
A0A6J1FSW6 AUGMIN subunit 2-like isoform X15.4e-3198.67Show/hide
Query:  MSMGSDTTWVGKKPLRRIGGMSDALSIAADLGFSVSPPSQEDLQNISSATGEQGDDVIRVLRELAAVQRKIADLQ
        MSMGSDTTWVGKKPLRRIGGMSDALSIAADLGFSVS PSQEDLQNISSATGEQGDDVIRVLRELAAVQRKIADLQ
Subjt:  MSMGSDTTWVGKKPLRRIGGMSDALSIAADLGFSVSPPSQEDLQNISSATGEQGDDVIRVLRELAAVQRKIADLQ
A0A6J1FWU8 AUGMIN subunit 2-like isoform X25.4e-3198.67Show/hide
Query:  MSMGSDTTWVGKKPLRRIGGMSDALSIAADLGFSVSPPSQEDLQNISSATGEQGDDVIRVLRELAAVQRKIADLQ
        MSMGSDTTWVGKKPLRRIGGMSDALSIAADLGFSVS PSQEDLQNISSATGEQGDDVIRVLRELAAVQRKIADLQ
Subjt:  MSMGSDTTWVGKKPLRRIGGMSDALSIAADLGFSVSPPSQEDLQNISSATGEQGDDVIRVLRELAAVQRKIADLQ
A0A6J1I6N9 AUGMIN subunit 2-like1.1e-2892.11Show/hide
Query:  MSMGSDTTWVGKKPLRRIGGMSDALSIAADLGFSVS-PPSQEDLQNISSATGEQGDDVIRVLRELAAVQRKIADLQ
        MSMGSDTTWVGKKPLRRIGGMSDALSIAADLGFSV+ PPSQE+LQNISSATGE+GDD+IRVLREL AVQRKIADLQ
Subjt:  MSMGSDTTWVGKKPLRRIGGMSDALSIAADLGFSVS-PPSQEDLQNISSATGEQGDDVIRVLRELAAVQRKIADLQ
A0A6J1JEX3 AUGMIN subunit 2-like1.9e-3197.33Show/hide
Query:  MSMGSDTTWVGKKPLRRIGGMSDALSIAADLGFSVSPPSQEDLQNISSATGEQGDDVIRVLRELAAVQRKIADLQ
        MSMGSDTTWVGKKPLRRIGGMSDALSIAADLGFSVSPPSQEDLQNIS+ATGEQGDD+IRVLRELAAVQRKIADLQ
Subjt:  MSMGSDTTWVGKKPLRRIGGMSDALSIAADLGFSVSPPSQEDLQNISSATGEQGDDVIRVLRELAAVQRKIADLQ
SwissProt top hitse value%identityAlignment
O48767 AUGMIN subunit 27.8e-2777.63Show/hide
Query:  MSMGSDTTWVGKKPLRRIGGMSDALSIAADLGFSVS-PPSQEDLQNISSATGEQGDDVIRVLRELAAVQRKIADLQ
        MSMG DTTWVGKKP+RRIGG+SDALSIA+DLGF+V+ PPSQE+LQ+ +S+ GE+GDD+IRVLREL+ VQRKIADLQ
Subjt:  MSMGSDTTWVGKKPLRRIGGMSDALSIAADLGFSVS-PPSQEDLQNISSATGEQGDDVIRVLRELAAVQRKIADLQ
Arabidopsis top hitse value%identityAlignment
AT2G32980.1 unknown protein5.6e-2877.63Show/hide
Query:  MSMGSDTTWVGKKPLRRIGGMSDALSIAADLGFSVS-PPSQEDLQNISSATGEQGDDVIRVLRELAAVQRKIADLQ
        MSMG DTTWVGKKP+RRIGG+SDALSIA+DLGF+V+ PPSQE+LQ+ +S+ GE+GDD+IRVLREL+ VQRKIADLQ
Subjt:  MSMGSDTTWVGKKPLRRIGGMSDALSIAADLGFSVS-PPSQEDLQNISSATGEQGDDVIRVLRELAAVQRKIADLQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGATGGGAAGTGATACCACATGGGTTGGAAAGAAACCTCTGAGGCGAATCGGAGGAATGTCCGATGCCCTCTCAATTGCTGCCGATCTCGGTTTCTCTGTCTCTCC
GCCTTCACAGGAAGACCTGCAAAATATATCTTCTGCTACTGGTGAGCAGGGTGATGATGTAATCAGAGTTTTACGAGAGCTTGCTGCTGTTCAAAGGAAAATAGCAGATC
TTCAA
mRNA sequenceShow/hide mRNA sequence
ATTCAAATCAAACACCGGAAATGATTTCAAATCCGGAGTGTAATTCTCTGAGAATTAGGGACTCCATGCTATAAAAATTCTGCAGTCTTAGCTGCTTTCTGCTTTTGCTT
TGTCGAGCTTTGCAGCGGGGGGTTTGAATGTCGATGGGAAGTGATACCACATGGGTTGGAAAGAAACCTCTGAGGCGAATCGGAGGAATGTCCGATGCCCTCTCAATTGC
TGCCGATCTCGGTTTCTCTGTCTCTCCGCCTTCACAGGAAGACCTGCAAAATATATCTTCTGCTACTGGTGAGCAGGGTGATGATGTAATCAGAGTTTTACGAGAGCTTG
CTGCTGTTCAAAGGAAAATAGCAGATCTTCAA
Protein sequenceShow/hide protein sequence
MSMGSDTTWVGKKPLRRIGGMSDALSIAADLGFSVSPPSQEDLQNISSATGEQGDDVIRVLRELAAVQRKIADLQ