CuGenDBv2

Gene ID	Carg18494
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Protein BRICK 1
Genome location	Carg_Chr07:2619486..2620179
RNA-Seq Expression	Carg18494
Synteny	Carg18494
Gene Ontology terms	GO:0008064 - regulation of actin polymerization or depolymerization (biological process) GO:0048870 - cell motility (biological process) GO:0005856 - cytoskeleton (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0031209 - SCAR complex (cellular component) GO:0044877 - protein-containing complex binding (molecular function)
InterPro domains	IPR033378 - Protein BRICK1

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0036361.1 protein BRICK 1 [Cucumis melo var. makuwa]

5.3e-36

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Query:  MARAGGITNAVNVGIAVQADWENREFISHISINIRRLFDFLVHFGTGISRFLTYFLVPSEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFTT
        MARAGGITNAVNVGIAVQADWENREFISHISIN+RRLFDFLVHF  GI  FL   LV  EATTKSKLASLNEKLDTLERRLEMLEVQVSTASAN SLFTT
Subjt:  MARAGGITNAVNVGIAVQADWENREFISHISINIRRLFDFLVHFGTGISRFLTYFLVPSEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFTT

KAG7026881.1 Protein BRICK 1, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.7e-45

100

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Query:  MARAGGITNAVNVGIAVQADWENREFISHISINIRRLFDFLVHFGTGISRFLTYFLVPSEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFTT
        MARAGGITNAVNVGIAVQADWENREFISHISINIRRLFDFLVHFGTGISRFLTYFLVPSEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFTT
Subjt:  MARAGGITNAVNVGIAVQADWENREFISHISINIRRLFDFLVHFGTGISRFLTYFLVPSEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFTT

XP_004143434.1 protein BRICK 1 isoform X6 [Cucumis sativus]

1.2e-32

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Query:  MARAGGITNAVNVGIAVQADWENREFISHISINIRRLFDFLVHFGTGISRFLTYFLVPSEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFTT
        MARAGGITNAVNVGIAVQADWENREFISHISIN+RRLFDFLVHF               EATTKSKLASLNEKLDTLERRLEMLEVQVSTASAN SLFTT
Subjt:  MARAGGITNAVNVGIAVQADWENREFISHISINIRRLFDFLVHFGTGISRFLTYFLVPSEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFTT

XP_022132950.1 protein BRICK 1 [Momordica charantia]

1.4e-33

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Query:  MARAGGITNAVNVGIAVQADWENREFISHISINIRRLFDFLVHFGTGISRFLTYFLVPSEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFTT
        MARAGGITNAVNVGIAVQADWENREFISHISIN+RRLFDFLVHF               EATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFTT
Subjt:  MARAGGITNAVNVGIAVQADWENREFISHISINIRRLFDFLVHFGTGISRFLTYFLVPSEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFTT

XP_022963287.1 protein BRICK 1 [Cucurbita moschata]

1.1e-33

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Query:  MARAGGITNAVNVGIAVQADWENREFISHISINIRRLFDFLVHFGTGISRFLTYFLVPSEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFTT
        MARAGGITNAVNVGIAVQADWENREFISHISINIRRLFDFLVHF               EATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFTT
Subjt:  MARAGGITNAVNVGIAVQADWENREFISHISINIRRLFDFLVHFGTGISRFLTYFLVPSEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFTT

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KG45 Protein BRICK1

5.9e-33

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Query:  MARAGGITNAVNVGIAVQADWENREFISHISINIRRLFDFLVHFGTGISRFLTYFLVPSEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFTT
        MARAGGITNAVNVGIAVQADWENREFISHISIN+RRLFDFLVHF               EATTKSKLASLNEKLDTLERRLEMLEVQVSTASAN SLFTT
Subjt:  MARAGGITNAVNVGIAVQADWENREFISHISINIRRLFDFLVHFGTGISRFLTYFLVPSEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFTT

A0A5D3CQS5 Protein BRICK 1

2.6e-36

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Query:  MARAGGITNAVNVGIAVQADWENREFISHISINIRRLFDFLVHFGTGISRFLTYFLVPSEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFTT
        MARAGGITNAVNVGIAVQADWENREFISHISIN+RRLFDFLVHF  GI  FL   LV  EATTKSKLASLNEKLDTLERRLEMLEVQVSTASAN SLFTT
Subjt:  MARAGGITNAVNVGIAVQADWENREFISHISINIRRLFDFLVHFGTGISRFLTYFLVPSEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFTT

A0A6J1BTZ0 protein BRICK 1

7.0e-34

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Query:  MARAGGITNAVNVGIAVQADWENREFISHISINIRRLFDFLVHFGTGISRFLTYFLVPSEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFTT
        MARAGGITNAVNVGIAVQADWENREFISHISIN+RRLFDFLVHF               EATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFTT
Subjt:  MARAGGITNAVNVGIAVQADWENREFISHISINIRRLFDFLVHFGTGISRFLTYFLVPSEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFTT

A0A6J1HEV8 protein BRICK 1

5.4e-34

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Query:  MARAGGITNAVNVGIAVQADWENREFISHISINIRRLFDFLVHFGTGISRFLTYFLVPSEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFTT
        MARAGGITNAVNVGIAVQADWENREFISHISINIRRLFDFLVHF               EATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFTT
Subjt:  MARAGGITNAVNVGIAVQADWENREFISHISINIRRLFDFLVHFGTGISRFLTYFLVPSEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFTT

A0A6J1KN25 protein BRICK 1

5.4e-34

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Query:  MARAGGITNAVNVGIAVQADWENREFISHISINIRRLFDFLVHFGTGISRFLTYFLVPSEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFTT
        MARAGGITNAVNVGIAVQADWENREFISHISINIRRLFDFLVHF               EATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFTT
Subjt:  MARAGGITNAVNVGIAVQADWENREFISHISINIRRLFDFLVHFGTGISRFLTYFLVPSEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFTT

SwissProt top hits

e value

%identity

Alignment

A2BD66 Probable protein BRICK1-B

6.0e-06

38.36

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Query:  VQADWENREFISHISINIRRLFDFLVHFGTGISRFLTYFLVPSEATTKSKLASLNEKLDTLERRLEMLEVQVS
        +  DW NRE+I  I+ +I+++ DFL  F               + + +S+LA+LNEKL TLERR+E +E +V+
Subjt:  VQADWENREFISHISINIRRLFDFLVHFGTGISRFLTYFLVPSEATTKSKLASLNEKLDTLERRLEMLEVQVS

Q54X65 Protein BRICK1

2.7e-06

39.19

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Query:  VQADWENREFISHISINIRRLFDFLVHFGTGISRFLTYFLVPSEATTKSKLASLNEKLDTLERRLEMLEVQVST
        +Q DWE REFI  +SINI+++ +FL  F               E +T++KL+ LNEKL  L+R+++ LE    T
Subjt:  VQADWENREFISHISINIRRLFDFLVHFGTGISRFLTYFLVPSEATTKSKLASLNEKLDTLERRLEMLEVQVST

Q84VA7 Probable protein BRICK1

1.0e-26

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Query:  MARAG--GITNAVNVGIAVQADWENREFISHISINIRRLFDFLVHFGTGISRFLTYFLVPSEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLF
        MARAG  G+ N VNVGIAVQADWENREFIS+IS+N+RRLFDFL+ F               EATTKSKLASLNEKLD LER+LE+LEVQVS+A+ NPS+F
Subjt:  MARAG--GITNAVNVGIAVQADWENREFISHISINIRRLFDFLVHFGTGISRFLTYFLVPSEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLF

Q8RW98 Protein BRICK1

8.0e-27

66.33

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Query:  MARAGGITNAVNVGIAVQADWENREFISHISINIRRLFDFLVHFGTGISRFLTYFLVPSEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLF
        M R GG+ N VNVGIAVQADWENREFIS+IS+N+RRLFDFL+ F               EATTKSKLASLNEKLD LER+LE+LEVQV +A+ NPS+F
Subjt:  MARAGGITNAVNVGIAVQADWENREFISHISINIRRLFDFLVHFGTGISRFLTYFLVPSEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLF

Q94JY4 Protein BRICK 1

1.7e-32

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Query:  MARAGGITNAVNVGIAVQADWENREFISHISINIRRLFDFLVHFGTGISRFLTYFLVPSEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFTT
        MA+AGGITNAVNVGIAVQADWENREFISHIS+N+RRLF+FLV F               E+TTKSKLASLNEKLD LERRLEMLEVQVSTA+ANPSLF T
Subjt:  MARAGGITNAVNVGIAVQADWENREFISHISINIRRLFDFLVHFGTGISRFLTYFLVPSEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFTT

Arabidopsis top hits

e value

%identity

Alignment

AT2G22640.1 BRICK1, putative

1.2e-33

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Query:  MARAGGITNAVNVGIAVQADWENREFISHISINIRRLFDFLVHFGTGISRFLTYFLVPSEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFTT
        MA+AGGITNAVNVGIAVQADWENREFISHIS+N+RRLF+FLV F               E+TTKSKLASLNEKLD LERRLEMLEVQVSTA+ANPSLF T
Subjt:  MARAGGITNAVNVGIAVQADWENREFISHISINIRRLFDFLVHFGTGISRFLTYFLVPSEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFTT

Sequences

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CDS sequence

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ATGGCTAGAGCTGGAGGAATTACTAACGCCGTAAACGTAGGGATAGCGGTTCAAGCTGATTGGGAGAACCGCGAGTTCATATCCCATATTTCAATTAATATTCGTCGTCT
CTTTGATTTTCTCGTCCATTTTGGAACAGGAATATCCAGGTTTCTAACCTATTTCCTTGTTCCATCAGAGGCAACAACAAAGAGCAAGTTGGCATCTTTGAACGAGAAGC
TCGATACGCTGGAGCGGCGGCTTGAAATGCTTGAAGTCCAAGTCAGTACTGCATCTGCTAATCCATCTCTTTTTACCACTTAA

mRNA sequence

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Protein sequence

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MARAGGITNAVNVGIAVQADWENREFISHISINIRRLFDFLVHFGTGISRFLTYFLVPSEATTKSKLASLNEKLDTLERRLEMLEVQVSTASANPSLFTT

Carg18494 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome