CuGenDBv2

Gene ID	Carg18499
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Hydroxyproline-rich glycoprotein family protein
Genome location	Carg_Chr07:2640691..2641170
RNA-Seq Expression	Carg18499
Synteny	Carg18499
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR037699 - Uncharacterized protein At5g65660-like

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022133072.1 uncharacterized protein At5g65660 [Momordica charantia]

2.5e-57

87.12

Show/hide

Query:  METPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHHDHHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFI
        ME+PDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRS+RRSA+Q   H H  LPSSPSKSN  +LDLE NQR+SLSV+MPGDSIPKFI
Subjt:  METPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHHDHHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFI

Query:  AMPCPREPPRPEMIHVKVEKPPKPPRIAIPFY
        AMPCPREPPRPEMI VKVEKPPKPPRIA+PFY
Subjt:  AMPCPREPPRPEMIHVKVEKPPKPPRIAIPFY

XP_022962719.1 uncharacterized protein At5g65660-like [Cucurbita moschata]

1.4e-68

100

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Query:  METPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHHDHHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFI
        METPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHHDHHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFI
Subjt:  METPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHHDHHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFI

Query:  AMPCPREPPRPEMIHVKVEKPPKPPRIAIPFY
        AMPCPREPPRPEMIHVKVEKPPKPPRIAIPFY
Subjt:  AMPCPREPPRPEMIHVKVEKPPKPPRIAIPFY

XP_023003846.1 uncharacterized protein At5g65660-like [Cucurbita maxima]

1.0e-66

98.48

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Query:  METPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHHDHHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFI
        METPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHHDHHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFI
Subjt:  METPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHHDHHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFI

Query:  AMPCPREPPRPEMIHVKVEKPPKPPRIAIPFY
        AMPCPREPPRPEMI V VEKPPKPPRIAIPFY
Subjt:  AMPCPREPPRPEMIHVKVEKPPKPPRIAIPFY

XP_023518276.1 uncharacterized protein At5g65660-like [Cucurbita pepo subsp. pepo]

4.5e-67

98.48

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Query:  METPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHHDHHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFI
        METPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHHDHHLLPSSPSKSN TALDLEKNQRESLSVVMPGDSIPKFI
Subjt:  METPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHHDHHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFI

Query:  AMPCPREPPRPEMIHVKVEKPPKPPRIAIPFY
        AMPCPREPPRPEMI VKVEKPPKPPRIAIPFY
Subjt:  AMPCPREPPRPEMIHVKVEKPPKPPRIAIPFY

XP_038881262.1 uncharacterized protein At5g65660-like [Benincasa hispida]

1.2e-56

87.12

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Query:  METPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHHDHHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFI
        ME+PDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRS+RRSA+Q LH D   L SSPSKSN T+ DLEKNQRESLSV+MPGDSIPKFI
Subjt:  METPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHHDHHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFI

Query:  AMPCPREPPRPEMIHVKVEKPPKPPRIAIPFY
        AMPCPREPPR EMI VKVEKPPKP RIA+PFY
Subjt:  AMPCPREPPRPEMIHVKVEKPPKPPRIAIPFY

TrEMBL top hits

e value

%identity

Alignment

A0A6J1BVL2 uncharacterized protein At5g65660

1.2e-57

87.12

Show/hide

Query:  METPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHHDHHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFI
        ME+PDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRS+RRSA+Q   H H  LPSSPSKSN  +LDLE NQR+SLSV+MPGDSIPKFI
Subjt:  METPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHHDHHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFI

Query:  AMPCPREPPRPEMIHVKVEKPPKPPRIAIPFY
        AMPCPREPPRPEMI VKVEKPPKPPRIA+PFY
Subjt:  AMPCPREPPRPEMIHVKVEKPPKPPRIAIPFY

A0A6J1GCM8 uncharacterized protein At5g65660-like

1.8e-53

82.44

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Query:  METPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHHDHHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFI
        ME+PDFSPPHADASRPSL FPLGTALLLLVIFTLSGIFSCCYHWDKLRS+RRSA+Q         P+SPSK   T+LDLEKNQR+SLSV+MPGDSIPKFI
Subjt:  METPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHHDHHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFI

Query:  AMPCPREPPRPEMIHVKVEKPPKPPRIAIPF
        AMPCPREPPRPEM+ VKVEKPPKPPRIA+PF
Subjt:  AMPCPREPPRPEMIHVKVEKPPKPPRIAIPF

A0A6J1HHX0 uncharacterized protein At5g65660-like

6.8e-69

100

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Query:  METPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHHDHHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFI
        METPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHHDHHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFI
Subjt:  METPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHHDHHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFI

Query:  AMPCPREPPRPEMIHVKVEKPPKPPRIAIPFY
        AMPCPREPPRPEMIHVKVEKPPKPPRIAIPFY
Subjt:  AMPCPREPPRPEMIHVKVEKPPKPPRIAIPFY

A0A6J1IPP8 uncharacterized protein At5g65660-like

8.9e-53

81.34

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Query:  METPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHHDHHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFI
        ME+PDFSPPHADASRPSL FPLGTALLLLVIFTLSGIFSCCYHWDKLRS+RRSA+Q         P+SPSK   T+LDLEKNQR+SLSV+MPGDSIPKFI
Subjt:  METPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHHDHHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFI

Query:  AMPCPREPPRPEMIHVKVEKPPK--PPRIAIPFY
        AMPCPREPPRPEM+ VKVEKPPK  PPRIA+PFY
Subjt:  AMPCPREPPRPEMIHVKVEKPPK--PPRIAIPFY

A0A6J1KQE2 uncharacterized protein At5g65660-like

4.9e-67

98.48

Show/hide

Query:  METPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHHDHHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFI
        METPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHHDHHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFI
Subjt:  METPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHHDHHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFI

Query:  AMPCPREPPRPEMIHVKVEKPPKPPRIAIPFY
        AMPCPREPPRPEMI V VEKPPKPPRIAIPFY
Subjt:  AMPCPREPPRPEMIHVKVEKPPKPPRIAIPFY

SwissProt top hits

e value

%identity

Alignment

Q9LSK9 Uncharacterized protein At5g65660

4.7e-35

57.78

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Query:  TPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHHDHHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFIAM
        T DFSPPH DASRPSLGFPLGTALLL++IF+LSGIFSCCYHWDK RS+RRS A         + S+P K      +++K Q  S+ V+MPGD+ PKFIA+
Subjt:  TPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHHDHHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFIAM

Query:  PCPREPPRPEMIHVKVEKPP-----KPPRIAIPFY
        PCP  PPRPE + V V+ PP     KP R  +P Y
Subjt:  PCPREPPRPEMIHVKVEKPP-----KPPRIAIPFY

Arabidopsis top hits

e value

%identity

Alignment

AT5G65660.1 hydroxyproline-rich glycoprotein family protein

3.4e-36

57.78

Show/hide

Query:  TPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHHDHHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFIAM
        T DFSPPH DASRPSLGFPLGTALLL++IF+LSGIFSCCYHWDK RS+RRS A         + S+P K      +++K Q  S+ V+MPGD+ PKFIA+
Subjt:  TPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHHDHHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFIAM

Query:  PCPREPPRPEMIHVKVEKPP-----KPPRIAIPFY
        PCP  PPRPE + V V+ PP     KP R  +P Y
Subjt:  PCPREPPRPEMIHVKVEKPP-----KPPRIAIPFY

Sequences

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CDS sequence

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ATGGAGACTCCCGATTTCTCGCCGCCTCACGCCGACGCATCCAGACCCTCCTTAGGCTTTCCTCTCGGCACTGCTCTCCTCCTTCTCGTCATCTTCACCTTGAGCGGAAT
CTTCTCCTGCTGTTACCATTGGGATAAACTCAGATCCATCCGCCGTTCCGCTGCCCAAGCACTACATCACGATCATCATCTCCTCCCTTCGTCTCCATCCAAATCCAACT
CTACTGCACTGGATTTGGAGAAGAATCAAAGAGAGAGCTTATCGGTGGTGATGCCTGGGGATTCGATTCCCAAATTCATCGCGATGCCCTGCCCTAGAGAGCCGCCTCGG
CCGGAGATGATTCATGTGAAAGTGGAGAAGCCGCCGAAACCGCCGCGAATCGCGATTCCTTTCTATTAG

mRNA sequence

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Protein sequence

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METPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHHDHHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFIAMPCPREPPR
PEMIHVKVEKPPKPPRIAIPFY

Carg18499 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome