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Carg18518 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18518
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionEpidermal patterning factor-like protein
Genome locationCarg_Chr07:2750424..2751994
RNA-Seq ExpressionCarg18518
SyntenyCarg18518
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594944.1 EPIDERMAL PATTERNING FACTOR-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]3.9e-65100Show/hide
Query:  MGCECNNNGVIGRSRILCATLSFLFFLILASTQMRFMAEGRSIPKSGKTVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTLKNIAYAR
        MGCECNNNGVIGRSRILCATLSFLFFLILASTQMRFMAEGRSIPKSGKTVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTLKNIAYAR
Subjt:  MGCECNNNGVIGRSRILCATLSFLFFLILASTQMRFMAEGRSIPKSGKTVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTLKNIAYAR

Query:  DEASNYKPMSWKCKCGSLIFNP
        DEASNYKPMSWKCKCGSLIFNP
Subjt:  DEASNYKPMSWKCKCGSLIFNP

KAG7026905.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita argyrosperma subsp. argyrosperma]3.9e-65100Show/hide
Query:  MGCECNNNGVIGRSRILCATLSFLFFLILASTQMRFMAEGRSIPKSGKTVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTLKNIAYAR
        MGCECNNNGVIGRSRILCATLSFLFFLILASTQMRFMAEGRSIPKSGKTVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTLKNIAYAR
Subjt:  MGCECNNNGVIGRSRILCATLSFLFFLILASTQMRFMAEGRSIPKSGKTVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTLKNIAYAR

Query:  DEASNYKPMSWKCKCGSLIFNP
        DEASNYKPMSWKCKCGSLIFNP
Subjt:  DEASNYKPMSWKCKCGSLIFNP

XP_022963149.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita moschata]4.8e-6396.72Show/hide
Query:  MGCECNNNGVIGRSRILCATLSFLFFLILASTQMRFMAEGRSIPKSGKTVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTLKNIAYAR
        MGCECNNNGVIGRSRILCAT+SFLFFLILASTQMRFMAEGRSI KSGKTVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSS +KNIAYAR
Subjt:  MGCECNNNGVIGRSRILCATLSFLFFLILASTQMRFMAEGRSIPKSGKTVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTLKNIAYAR

Query:  DEASNYKPMSWKCKCGSLIFNP
        DEASNYKPMSWKCKCGSLIFNP
Subjt:  DEASNYKPMSWKCKCGSLIFNP

XP_023518504.1 EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X1 [Cucurbita pepo subsp. pepo]6.7e-6599.18Show/hide
Query:  MGCECNNNGVIGRSRILCATLSFLFFLILASTQMRFMAEGRSIPKSGKTVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTLKNIAYAR
        MGCECNNNGVIGRSRILCATLSFLFFLILASTQMRFMAEGRSIPKSGKTVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSST+KNIAYAR
Subjt:  MGCECNNNGVIGRSRILCATLSFLFFLILASTQMRFMAEGRSIPKSGKTVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTLKNIAYAR

Query:  DEASNYKPMSWKCKCGSLIFNP
        DEASNYKPMSWKCKCGSLIFNP
Subjt:  DEASNYKPMSWKCKCGSLIFNP

XP_023518506.1 EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X2 [Cucurbita pepo subsp. pepo]6.7e-6599.18Show/hide
Query:  MGCECNNNGVIGRSRILCATLSFLFFLILASTQMRFMAEGRSIPKSGKTVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTLKNIAYAR
        MGCECNNNGVIGRSRILCATLSFLFFLILASTQMRFMAEGRSIPKSGKTVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSST+KNIAYAR
Subjt:  MGCECNNNGVIGRSRILCATLSFLFFLILASTQMRFMAEGRSIPKSGKTVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTLKNIAYAR

Query:  DEASNYKPMSWKCKCGSLIFNP
        DEASNYKPMSWKCKCGSLIFNP
Subjt:  DEASNYKPMSWKCKCGSLIFNP

TrEMBL top hitse value%identityAlignment
A0A6J1BSQ3 Epidermal patterning factor-like protein1.4e-5583.46Show/hide
Query:  MGCECNNNGVIGRSRILCATLSFLFFLILASTQMRFMAEGRSIPKSGKTVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQK-----SSTLKN
        M CECNNNGVIGRSRILCAT+ FLF LILASTQMRFMAEGR +PK G+TV E+KVVLRGQIGSRPPKCERRCSWC HCEAIQVP NPQK     SS   N
Subjt:  MGCECNNNGVIGRSRILCATLSFLFFLILASTQMRFMAEGRSIPKSGKTVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQK-----SSTLKN

Query:  IAYARDEASNYKPMSWKCKCGSLIFNP
        +AYARDEASNYKPMSWKCKCGSLIFNP
Subjt:  IAYARDEASNYKPMSWKCKCGSLIFNP

A0A6J1GDI3 Epidermal patterning factor-like protein1.4e-5282.03Show/hide
Query:  MGCECNNNG-VIGRSRILCATLSFLFFLILASTQMRFMAEGRSIPKSGKTVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSST-----LK
        MGCECNNNG VIGRSRILCAT+SFL  LILASTQMR  AEGRSI    KTV+EDK +LRGQIGS+PPKCERRCSWC HCEAIQVPANPQKS+T     +K
Subjt:  MGCECNNNG-VIGRSRILCATLSFLFFLILASTQMRFMAEGRSIPKSGKTVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSST-----LK

Query:  NIAYARDEASNYKPMSWKCKCGSLIFNP
        NI YARDEASNYKPMSWKCKCGSLIFNP
Subjt:  NIAYARDEASNYKPMSWKCKCGSLIFNP

A0A6J1HJ94 Epidermal patterning factor-like protein2.3e-6396.72Show/hide
Query:  MGCECNNNGVIGRSRILCATLSFLFFLILASTQMRFMAEGRSIPKSGKTVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTLKNIAYAR
        MGCECNNNGVIGRSRILCAT+SFLFFLILASTQMRFMAEGRSI KSGKTVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSS +KNIAYAR
Subjt:  MGCECNNNGVIGRSRILCATLSFLFFLILASTQMRFMAEGRSIPKSGKTVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTLKNIAYAR

Query:  DEASNYKPMSWKCKCGSLIFNP
        DEASNYKPMSWKCKCGSLIFNP
Subjt:  DEASNYKPMSWKCKCGSLIFNP

A0A6J1KLZ1 Epidermal patterning factor-like protein1.1e-6295.9Show/hide
Query:  MGCECNNNGVIGRSRILCATLSFLFFLILASTQMRFMAEGRSIPKSGKTVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTLKNIAYAR
        MGCECNNNGVIGR RILCAT+SFLF LILASTQMRFMAEGRSI KSGKTVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSST+KNIAYAR
Subjt:  MGCECNNNGVIGRSRILCATLSFLFFLILASTQMRFMAEGRSIPKSGKTVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTLKNIAYAR

Query:  DEASNYKPMSWKCKCGSLIFNP
        DEASNYKPMSWKCKCGSLIFNP
Subjt:  DEASNYKPMSWKCKCGSLIFNP

A0A6J1KNP8 Epidermal patterning factor-like protein1.1e-6295.9Show/hide
Query:  MGCECNNNGVIGRSRILCATLSFLFFLILASTQMRFMAEGRSIPKSGKTVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTLKNIAYAR
        MGCECNNNGVIGR RILCAT+SFLF LILASTQMRFMAEGRSI KSGKTVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSST+KNIAYAR
Subjt:  MGCECNNNGVIGRSRILCATLSFLFFLILASTQMRFMAEGRSIPKSGKTVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTLKNIAYAR

Query:  DEASNYKPMSWKCKCGSLIFNP
        DEASNYKPMSWKCKCGSLIFNP
Subjt:  DEASNYKPMSWKCKCGSLIFNP

SwissProt top hitse value%identityAlignment
C4B8C4 EPIDERMAL PATTERNING FACTOR-like protein 34.6e-0840.62Show/hide
Query:  EDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTLKNIAYARDEASNYKPMSWKCKC
        E+ V  R +IGS+PP CE++C  C  CEAIQ P       T+ +I +     +NY+P  W+C C
Subjt:  EDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTLKNIAYARDEASNYKPMSWKCKC

Q2V3I3 EPIDERMAL PATTERNING FACTOR-like protein 42.5e-0631.9Show/hide
Query:  RSRILCATLSFLFFLILASTQMRFMAEGRSIPK------SGKTVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTLKNIAYARDEASNY
        R R L A L     L L S      A+GR I +       G  +  +K    G  GS PP C  +C  C  C+ + VP  P  S  L+           Y
Subjt:  RSRILCATLSFLFFLILASTQMRFMAEGRSIPK------SGKTVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTLKNIAYARDEASNY

Query:  KPMSWKCKCGSLIFNP
         P +W+CKCG+ +F P
Subjt:  KPMSWKCKCGSLIFNP

Q9LFT5 EPIDERMAL PATTERNING FACTOR-like protein 11.8e-0937.18Show/hide
Query:  RGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTLK-------------NIAYARDEASNYKPMSWKCKCGSLIFNP
        + ++GS PP C  RC+ C  C AIQVP  P +S   +             ++    D+ SNYKPM WKC C    +NP
Subjt:  RGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTLK-------------NIAYARDEASNYKPMSWKCKCGSLIFNP

Q9LUH9 EPIDERMAL PATTERNING FACTOR-like protein 53.6e-0535.94Show/hide
Query:  GQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTLKNIAYARDEASNYKPMSWKCKCGSLIFNP
        G  GS PP C  +C  C  C+A+ VP  P     L+           Y P +W+CKCG+ +F P
Subjt:  GQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTLKNIAYARDEASNYKPMSWKCKCGSLIFNP

Q9T068 EPIDERMAL PATTERNING FACTOR-like protein 23.2e-2251.28Show/hide
Query:  LFFLILASTQMRFMAEGRSIPKS---GKTVSED-KVVLRGQIGSRPPKCER-RCSWCAHCEAIQVPANPQ------------KSSTLKNIAYAR-DEASN
        L  LIL ST    MA GR  P S    K+  +D K+++RG IGSRPP+CER RC  C HCEAIQVP NPQ             SS   ++ Y R D+++N
Subjt:  LFFLILASTQMRFMAEGRSIPKS---GKTVSED-KVVLRGQIGSRPPKCER-RCSWCAHCEAIQVPANPQ------------KSSTLKNIAYAR-DEASN

Query:  YKPMSWKCKCGSLIFNP
        YKPMSWKCKCG+ I+NP
Subjt:  YKPMSWKCKCGSLIFNP

Arabidopsis top hitse value%identityAlignment
AT3G13898.1 unknown protein3.2e-0940.62Show/hide
Query:  EDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTLKNIAYARDEASNYKPMSWKCKC
        E+ V  R +IGS+PP CE++C  C  CEAIQ P       T+ +I +     +NY+P  W+C C
Subjt:  EDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTLKNIAYARDEASNYKPMSWKCKC

AT3G22820.1 allergen-related2.6e-0635.94Show/hide
Query:  GQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTLKNIAYARDEASNYKPMSWKCKCGSLIFNP
        G  GS PP C  +C  C  C+A+ VP  P     L+           Y P +W+CKCG+ +F P
Subjt:  GQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTLKNIAYARDEASNYKPMSWKCKCGSLIFNP

AT4G14723.1 BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1)1.8e-0731.9Show/hide
Query:  RSRILCATLSFLFFLILASTQMRFMAEGRSIPK------SGKTVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTLKNIAYARDEASNY
        R R L A L     L L S      A+GR I +       G  +  +K    G  GS PP C  +C  C  C+ + VP  P  S  L+           Y
Subjt:  RSRILCATLSFLFFLILASTQMRFMAEGRSIPK------SGKTVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTLKNIAYARDEASNY

Query:  KPMSWKCKCGSLIFNP
         P +W+CKCG+ +F P
Subjt:  KPMSWKCKCGSLIFNP

AT4G37810.1 unknown protein2.3e-2351.28Show/hide
Query:  LFFLILASTQMRFMAEGRSIPKS---GKTVSED-KVVLRGQIGSRPPKCER-RCSWCAHCEAIQVPANPQ------------KSSTLKNIAYAR-DEASN
        L  LIL ST    MA GR  P S    K+  +D K+++RG IGSRPP+CER RC  C HCEAIQVP NPQ             SS   ++ Y R D+++N
Subjt:  LFFLILASTQMRFMAEGRSIPKS---GKTVSED-KVVLRGQIGSRPPKCER-RCSWCAHCEAIQVPANPQ------------KSSTLKNIAYAR-DEASN

Query:  YKPMSWKCKCGSLIFNP
        YKPMSWKCKCG+ I+NP
Subjt:  YKPMSWKCKCGSLIFNP

AT5G10310.1 unknown protein1.3e-1037.18Show/hide
Query:  RGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTLK-------------NIAYARDEASNYKPMSWKCKCGSLIFNP
        + ++GS PP C  RC+ C  C AIQVP  P +S   +             ++    D+ SNYKPM WKC C    +NP
Subjt:  RGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTLK-------------NIAYARDEASNYKPMSWKCKCGSLIFNP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTGTGAGTGCAACAACAATGGCGTCATTGGCCGCAGTAGAATCTTGTGTGCGACTCTTTCTTTTCTCTTTTTTCTGATTTTGGCATCGACCCAGATGAGATTCAT
GGCTGAAGGCAGATCTATTCCAAAGAGTGGCAAGACAGTGAGTGAAGATAAAGTGGTATTACGAGGACAAATTGGGTCAAGGCCTCCAAAATGTGAGAGAAGATGCAGCT
GGTGTGCACACTGTGAGGCCATTCAAGTTCCTGCAAACCCACAAAAGTCTTCAACATTGAAGAACATAGCTTATGCTAGAGATGAAGCCTCAAATTACAAACCCATGAGC
TGGAAATGCAAATGTGGGAGCTTAATCTTCAACCCTTAA
mRNA sequenceShow/hide mRNA sequence
ACCAGAAATGAAAGAGAAAGAGAAAATAAAAGGGAAACGAAAACGAAATCCCACTCGTACACAGCTGCCATTGCGCTGCTCACATCTGCTAATTTGTTCTGTTTAACTCT
GTTTTTTAGGCTCTTCTTTCGAGTTCTGAGGAGCTCTGCAATTTTCGAACGAAAAGAAAAATGGGGTGTGAGTGCAACAACAATGGCGTCATTGGCCGCAGTAGAATCTT
GTGTGCGACTCTTTCTTTTCTCTTTTTTCTGATTTTGGCATCGACCCAGATGAGATTCATGGCTGAAGGCAGATCTATTCCAAAGAGTGGCAAGACAGTGAGTGAAGATA
AAGTGGTATTACGAGGACAAATTGGGTCAAGGCCTCCAAAATGTGAGAGAAGATGCAGCTGGTGTGCACACTGTGAGGCCATTCAAGTTCCTGCAAACCCACAAAAGTCT
TCAACATTGAAGAACATAGCTTATGCTAGAGATGAAGCCTCAAATTACAAACCCATGAGCTGGAAATGCAAATGTGGGAGCTTAATCTTCAACCCTTAAGTAGATGATCA
TCATCAACTCTGTAAATTAGTGATTATATGATTGTTTCTTTCACTTAACACTCTCTAGATATCTCTCTCTTTTGTTCTGACACTCTTGAGGGTTGAAAGCAGGCATTTGA
TGAAGAGAATTATGAACTGGGTTTCTTTTCTAACATGCAACTACTTCGGATTCCTTCCATATCAGTTTCATCTTGAAACACTTAAATGGGATAACTCATGAACAGTTTGA
TTAAGTATAGAAAAGTGGGTGTAAATTGAATGGGAGAGAGAGAGTGAATTTGATTCATTTGAAGGGTGGTGATTGGAATGAAGAGATCAGAAAAAGAGAGTGAAAGAAAT
GGCTTGTGATCATGGCAGACCAGACCCCACTGAGCTGTGCCTCTGCCTTAAAAACGTCGAGGTGTGCTTGGTGGGTAGCCATTATCCCTCACCTTGTTCCTTTTAGGCTG
CCTCGAAGAGTCGTTCTGTCTTGAACTTAAGTAATGGATTCACAGTCTTCGCTTTCATGGGTTAGGTTTCTATCATTGGACTGCAAGTATACTAAAGCCATCAATCTTCC
TATTTTCTTTCTTTTTATGCAGACAAGACAACACAAGTGGTACTCGACTAAACCCAAATCTGTTAGATGCTTATAGGAAACACATATGTTCTC
Protein sequenceShow/hide protein sequence
MGCECNNNGVIGRSRILCATLSFLFFLILASTQMRFMAEGRSIPKSGKTVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTLKNIAYARDEASNYKPMS
WKCKCGSLIFNP