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Carg18531 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18531
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr07:2834638..2835042
RNA-Seq ExpressionCarg18531
SyntenyCarg18531
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594957.1 hypothetical protein SDJN03_11510, partial [Cucurbita argyrosperma subsp. sororia]1.5e-73100Show/hide
Query:  MSHKKLYSKGNVPFSWEEKPGISKKICFQDVQPLPLHSVHEDSEFDDVGKIPPPPPCRVQPCSLRNASTKGSRWEEDPFLEAYKECTKSVKKGKLVAKKS
        MSHKKLYSKGNVPFSWEEKPGISKKICFQDVQPLPLHSVHEDSEFDDVGKIPPPPPCRVQPCSLRNASTKGSRWEEDPFLEAYKECTKSVKKGKLVAKKS
Subjt:  MSHKKLYSKGNVPFSWEEKPGISKKICFQDVQPLPLHSVHEDSEFDDVGKIPPPPPCRVQPCSLRNASTKGSRWEEDPFLEAYKECTKSVKKGKLVAKKS

Query:  KLFGFLCKSFDSCEIRDASVFKLGRDSIRVLSWK
        KLFGFLCKSFDSCEIRDASVFKLGRDSIRVLSWK
Subjt:  KLFGFLCKSFDSCEIRDASVFKLGRDSIRVLSWK

MBA0772117.1 hypothetical protein [Gossypium trilobum]1.4e-1847.37Show/hide
Query:  MSHKKLYSKGNVPFSWEEKPGISK--KICFQDVQPLPLHS----VHEDSEFDDVGKIPPPPPCRVQPCSLRNASTKGSR-WEEDPFLEAYKECTKSVKKG
        MSH K++S GN+PFSWEEKPG+SK  K+   D Q  P+ S    VH+        K+PPPPP   QP   R+AS KG R W +DPFL AYKECTKS    
Subjt:  MSHKKLYSKGNVPFSWEEKPGISK--KICFQDVQPLPLHS----VHEDSEFDDVGKIPPPPPCRVQPCSLRNASTKGSR-WEEDPFLEAYKECTKSVKKG

Query:  KLVAKKS---------KLFGFLCKSFDSCEIRD
        KL +  S         K   F CK  DS ++RD
Subjt:  KLVAKKS---------KLFGFLCKSFDSCEIRD

OMO56427.1 hypothetical protein CCACVL1_26561 [Corchorus capsularis]3.6e-1941.94Show/hide
Query:  MSHKKLYSKGNVPFSWEEKPGISKKICFQDVQPLPLH-SVHED------SEFDDVG----------KIPPPPPCRVQPCSLRNASTKGSR-WEEDPFLEA
        MSH+K++S+GNVPFSWE+KPG+SK I   D    P+   +HE+      S   D G          K+PPPPPC +Q    R+ S KG R W+EDPFL A
Subjt:  MSHKKLYSKGNVPFSWEEKPGISKKICFQDVQPLPLH-SVHED------SEFDDVG----------KIPPPPPCRVQPCSLRNASTKGSR-WEEDPFLEA

Query:  YKECTKS-VKKGKLVAK-------------KSKLFGFLCKSFDSCEIRDASVFKL
        YKECTK+  K GKL +              + K   F CK  +SC++RD ++ +L
Subjt:  YKECTKS-VKKGKLVAK-------------KSKLFGFLCKSFDSCEIRDASVFKL

OMP01746.1 hypothetical protein COLO4_11612 [Corchorus olitorius]7.2e-2042.58Show/hide
Query:  MSHKKLYSKGNVPFSWEEKPGISKKICFQDVQPLPLH-SVHED------SEFDDVG----------KIPPPPPCRVQPCSLRNASTKGSR-WEEDPFLEA
        MSH+K++S+GNVPFSWE+KPG+SK I   D    P+   +HE       S   D G          K+PPPPPC +QP   R+ S KG R W+EDPFL A
Subjt:  MSHKKLYSKGNVPFSWEEKPGISKKICFQDVQPLPLH-SVHED------SEFDDVG----------KIPPPPPCRVQPCSLRNASTKGSR-WEEDPFLEA

Query:  YKECTKS-VKKGKLVAK-------------KSKLFGFLCKSFDSCEIRDASVFKL
        YKECTK+  K GKL +              + K   F CK  ++C++RD ++ KL
Subjt:  YKECTKS-VKKGKLVAK-------------KSKLFGFLCKSFDSCEIRDASVFKL

POO00665.1 LOW QUALITY PROTEIN: hypothetical protein TorRG33x02_032960 [Trema orientale]7.9e-1943.88Show/hide
Query:  MSHKKLYSKGNVPFSWEEKPGISKKICFQD------VQPLPLHSVHEDSEFDDVGKIPPPPPCRVQPCSLRNASTKGSRWEEDPFLEAYKECTKSVKKGK
        MSH+K+YS+G++PFSWE+KPGISK     +      V+ L L S            I P PPC +     R++STKG +W+EDPFL AYKECTK +KKGK
Subjt:  MSHKKLYSKGNVPFSWEEKPGISKKICFQD------VQPLPLHSVHEDSEFDDVGKIPPPPPCRVQPCSLRNASTKGSRWEEDPFLEAYKECTKSVKKGK

Query:  ----------LVAKKSKLFGFLCKSFDSCEIRDASVFKL
                     KKS    F CKS  +CE++D +  KL
Subjt:  ----------LVAKKSKLFGFLCKSFDSCEIRDASVFKL

TrEMBL top hitse value%identityAlignment
A0A1R3GEE0 Uncharacterized protein1.7e-1941.94Show/hide
Query:  MSHKKLYSKGNVPFSWEEKPGISKKICFQDVQPLPLH-SVHED------SEFDDVG----------KIPPPPPCRVQPCSLRNASTKGSR-WEEDPFLEA
        MSH+K++S+GNVPFSWE+KPG+SK I   D    P+   +HE+      S   D G          K+PPPPPC +Q    R+ S KG R W+EDPFL A
Subjt:  MSHKKLYSKGNVPFSWEEKPGISKKICFQDVQPLPLH-SVHED------SEFDDVG----------KIPPPPPCRVQPCSLRNASTKGSR-WEEDPFLEA

Query:  YKECTKS-VKKGKLVAK-------------KSKLFGFLCKSFDSCEIRDASVFKL
        YKECTK+  K GKL +              + K   F CK  +SC++RD ++ +L
Subjt:  YKECTKS-VKKGKLVAK-------------KSKLFGFLCKSFDSCEIRDASVFKL

A0A1R3K3U4 Uncharacterized protein3.5e-2042.58Show/hide
Query:  MSHKKLYSKGNVPFSWEEKPGISKKICFQDVQPLPLH-SVHED------SEFDDVG----------KIPPPPPCRVQPCSLRNASTKGSR-WEEDPFLEA
        MSH+K++S+GNVPFSWE+KPG+SK I   D    P+   +HE       S   D G          K+PPPPPC +QP   R+ S KG R W+EDPFL A
Subjt:  MSHKKLYSKGNVPFSWEEKPGISKKICFQDVQPLPLH-SVHED------SEFDDVG----------KIPPPPPCRVQPCSLRNASTKGSR-WEEDPFLEA

Query:  YKECTKS-VKKGKLVAK-------------KSKLFGFLCKSFDSCEIRDASVFKL
        YKECTK+  K GKL +              + K   F CK  ++C++RD ++ KL
Subjt:  YKECTKS-VKKGKLVAK-------------KSKLFGFLCKSFDSCEIRDASVFKL

A0A2P5FS81 Uncharacterized protein3.8e-1943.88Show/hide
Query:  MSHKKLYSKGNVPFSWEEKPGISKKICFQD------VQPLPLHSVHEDSEFDDVGKIPPPPPCRVQPCSLRNASTKGSRWEEDPFLEAYKECTKSVKKGK
        MSH+K+YS+G++PFSWE+KPGISK     +      V+ L L S            I P PPC +     R++STKG +W+EDPFL AYKECTK +KKGK
Subjt:  MSHKKLYSKGNVPFSWEEKPGISKKICFQD------VQPLPLHSVHEDSEFDDVGKIPPPPPCRVQPCSLRNASTKGSRWEEDPFLEAYKECTKSVKKGK

Query:  ----------LVAKKSKLFGFLCKSFDSCEIRDASVFKL
                     KKS    F CKS  +CE++D +  KL
Subjt:  ----------LVAKKSKLFGFLCKSFDSCEIRDASVFKL

A0A7J8S2N4 Uncharacterized protein6.5e-1947.76Show/hide
Query:  MSHKKLYSKGNVPFSWEEKPGISK--KICFQDVQPLPLHS----VHEDSEFDDVGKIPPPPPCRVQPCSLRNASTKGSR-WEEDPFLEAYKECTKSVKKG
        MSH K++S GNVPFSWEEKPG+SK  K+   D Q  P+ S    VH+        K+PPPPP   QP   R+AS KG R W +DPFL AYKECTKS    
Subjt:  MSHKKLYSKGNVPFSWEEKPGISK--KICFQDVQPLPLHS----VHEDSEFDDVGKIPPPPPCRVQPCSLRNASTKGSR-WEEDPFLEAYKECTKSVKKG

Query:  KLVAKKS----------KLFGFLCKSFDSCEIRD
        KL +  S          K   F CK  DS ++RD
Subjt:  KLVAKKS----------KLFGFLCKSFDSCEIRD

A0A7J9EGH2 Uncharacterized protein (Fragment)6.5e-1947.37Show/hide
Query:  MSHKKLYSKGNVPFSWEEKPGISK--KICFQDVQPLPLHS----VHEDSEFDDVGKIPPPPPCRVQPCSLRNASTKGSR-WEEDPFLEAYKECTKSVKKG
        MSH K++S GN+PFSWEEKPG+SK  K+   D Q  P+ S    VH+        K+PPPPP   QP   R+AS KG R W +DPFL AYKECTKS    
Subjt:  MSHKKLYSKGNVPFSWEEKPGISK--KICFQDVQPLPLHS----VHEDSEFDDVGKIPPPPPCRVQPCSLRNASTKGSR-WEEDPFLEAYKECTKSVKKG

Query:  KLVAKKS---------KLFGFLCKSFDSCEIRD
        KL +  S         K   F CK  DS ++RD
Subjt:  KLVAKKS---------KLFGFLCKSFDSCEIRD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCACAAAAAACTGTATTCTAAAGGAAACGTTCCCTTTTCATGGGAGGAAAAGCCTGGGATTTCCAAGAAAATCTGCTTCCAAGATGTTCAACCTCTGCCCTTACA
CTCTGTTCATGAAGATTCTGAATTTGATGACGTTGGTAAGATTCCTCCGCCGCCGCCGTGTCGGGTGCAGCCATGCTCTCTTAGAAACGCCTCCACCAAGGGAAGCCGGT
GGGAGGAGGACCCTTTTCTTGAGGCGTATAAGGAGTGTACCAAGAGTGTAAAAAAAGGGAAACTTGTGGCGAAGAAGAGTAAGTTGTTTGGGTTTCTTTGTAAGAGCTTT
GATTCTTGTGAAATTAGAGATGCGAGTGTGTTCAAGCTTGGTCGAGATAGCATTCGTGTGCTTAGTTGGAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCCACAAAAAACTGTATTCTAAAGGAAACGTTCCCTTTTCATGGGAGGAAAAGCCTGGGATTTCCAAGAAAATCTGCTTCCAAGATGTTCAACCTCTGCCCTTACA
CTCTGTTCATGAAGATTCTGAATTTGATGACGTTGGTAAGATTCCTCCGCCGCCGCCGTGTCGGGTGCAGCCATGCTCTCTTAGAAACGCCTCCACCAAGGGAAGCCGGT
GGGAGGAGGACCCTTTTCTTGAGGCGTATAAGGAGTGTACCAAGAGTGTAAAAAAAGGGAAACTTGTGGCGAAGAAGAGTAAGTTGTTTGGGTTTCTTTGTAAGAGCTTT
GATTCTTGTGAAATTAGAGATGCGAGTGTGTTCAAGCTTGGTCGAGATAGCATTCGTGTGCTTAGTTGGAAGTAG
Protein sequenceShow/hide protein sequence
MSHKKLYSKGNVPFSWEEKPGISKKICFQDVQPLPLHSVHEDSEFDDVGKIPPPPPCRVQPCSLRNASTKGSRWEEDPFLEAYKECTKSVKKGKLVAKKSKLFGFLCKSF
DSCEIRDASVFKLGRDSIRVLSWK