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Carg18533 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18533
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPhytosulfokine-beta
Genome locationCarg_Chr07:2842322..2842690
RNA-Seq ExpressionCarg18533
SyntenyCarg18533
Gene Ontology termsGO:0007165 - signal transduction (biological process)
GO:0008283 - cell population proliferation (biological process)
GO:0030154 - cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0008083 - growth factor activity (molecular function)
InterPro domainsIPR009438 - Phytosulfokine


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594959.1 Phytosulfokines 3, partial [Cucurbita argyrosperma subsp. sororia]3.5e-3998.88Show/hide
Query:  MASKFITFLCLIF-LLLLSNSPSAYAARPVPTVSSDAPATQIPNQGLETDQSDSEMMDERCHGVGEEECLIRRTLAAHLDYVYTQKHKP
        MASKFITFLCLIF LLLLSNSPSAYAARPVPTVSSDAPATQIPNQGLETDQSDSEMMDERCHGVGEEECLIRRTLAAHLDYVYTQKHKP
Subjt:  MASKFITFLCLIF-LLLLSNSPSAYAARPVPTVSSDAPATQIPNQGLETDQSDSEMMDERCHGVGEEECLIRRTLAAHLDYVYTQKHKP

KAG7026920.1 Phytosulfokines 3, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-40100Show/hide
Query:  MASKFITFLCLIFLLLLSNSPSAYAARPVPTVSSDAPATQIPNQGLETDQSDSEMMDERCHGVGEEECLIRRTLAAHLDYVYTQKHKP
        MASKFITFLCLIFLLLLSNSPSAYAARPVPTVSSDAPATQIPNQGLETDQSDSEMMDERCHGVGEEECLIRRTLAAHLDYVYTQKHKP
Subjt:  MASKFITFLCLIFLLLLSNSPSAYAARPVPTVSSDAPATQIPNQGLETDQSDSEMMDERCHGVGEEECLIRRTLAAHLDYVYTQKHKP

XP_022963144.1 phytosulfokines 3-like [Cucurbita moschata]1.9e-3795.51Show/hide
Query:  MASKFITFLCLIFLL-LLSNSPSAYAARPVPTVSSDAPATQIPNQGLETDQSDSEMMDERCHGVGEEECLIRRTLAAHLDYVYTQKHKP
        M SKFITFLCLIFLL LLSNSPSAYAARPVPTVSSDAPATQI NQGLETD+SDSEMMDERCHGVGEEECLIRRTLAAHLDYVYTQKHKP
Subjt:  MASKFITFLCLIFLL-LLSNSPSAYAARPVPTVSSDAPATQIPNQGLETDQSDSEMMDERCHGVGEEECLIRRTLAAHLDYVYTQKHKP

XP_023003386.1 phytosulfokines-like [Cucurbita maxima]2.9e-3897.75Show/hide
Query:  MASKFITFLCLIF-LLLLSNSPSAYAARPVPTVSSDAPATQIPNQGLETDQSDSEMMDERCHGVGEEECLIRRTLAAHLDYVYTQKHKP
        MASKFITFLCLIF LLLLSNSPSAYAARPVPTVSSDAPATQIPNQ LETDQSDSEMMDERCHGVGEEECLIRRTLAAHLDYVYTQKHKP
Subjt:  MASKFITFLCLIF-LLLLSNSPSAYAARPVPTVSSDAPATQIPNQGLETDQSDSEMMDERCHGVGEEECLIRRTLAAHLDYVYTQKHKP

XP_023518620.1 phytosulfokines-like [Cucurbita pepo subsp. pepo]3.2e-3795.56Show/hide
Query:  MASKFITFLCLI--FLLLLSNSPSAYAARPVPTVSSDAPATQIPNQGLETDQSDSEMMDERCHGVGEEECLIRRTLAAHLDYVYTQKHKP
        MASKFITFL LI   LLLLSNSPSAYAARPVPTVSSDAPATQIPNQGLETDQSDSEMMDERCHGVGEEECLIRRTLAAHLDYVYTQKHKP
Subjt:  MASKFITFLCLI--FLLLLSNSPSAYAARPVPTVSSDAPATQIPNQGLETDQSDSEMMDERCHGVGEEECLIRRTLAAHLDYVYTQKHKP

TrEMBL top hitse value%identityAlignment
A0A0A0KLK0 Phytosulfokine-beta2.5e-1967.03Show/hide
Query:  MASKFITFLCLIFLLLLSNSPSAYAARPVPTVSSDAPATQIPNQGL--ETDQSDSEM-MDERCHGVGEEECLIRRTLAAHLDYVYTQKHKP
        M SKF +FL + FLLLL + P AYAARP P     A  T IP Q L  E  QSD EM MDE C GVGEEECL+RRTLAAHLDYVYTQKHKP
Subjt:  MASKFITFLCLIFLLLLSNSPSAYAARPVPTVSSDAPATQIPNQGL--ETDQSDSEM-MDERCHGVGEEECLIRRTLAAHLDYVYTQKHKP

A0A5A7T4W2 Phytosulfokine-beta6.6e-2066.67Show/hide
Query:  MASKFITFLCLIFLLLLSNSPSAYAARPVPTVSSDAPATQIPNQGL--ETDQSDSEMMDERCHGVGEEECLIRRTLAAHLDYVYTQKHKP
        M SKF +FL +I LLL    P AYAARP P     A  T IP+QGL  E+ QSD EM DE C GVGEEECL+RRTLAAHLDYVYTQKHKP
Subjt:  MASKFITFLCLIFLLLLSNSPSAYAARPVPTVSSDAPATQIPNQGL--ETDQSDSEMMDERCHGVGEEECLIRRTLAAHLDYVYTQKHKP

A0A6J1HJ90 Phytosulfokine-beta9.2e-3895.51Show/hide
Query:  MASKFITFLCLIFLL-LLSNSPSAYAARPVPTVSSDAPATQIPNQGLETDQSDSEMMDERCHGVGEEECLIRRTLAAHLDYVYTQKHKP
        M SKFITFLCLIFLL LLSNSPSAYAARPVPTVSSDAPATQI NQGLETD+SDSEMMDERCHGVGEEECLIRRTLAAHLDYVYTQKHKP
Subjt:  MASKFITFLCLIFLL-LLSNSPSAYAARPVPTVSSDAPATQIPNQGLETDQSDSEMMDERCHGVGEEECLIRRTLAAHLDYVYTQKHKP

A0A6J1ILJ9 Phytosulfokine-beta2.3e-2063.74Show/hide
Query:  MASKFITFLCLIFLLLL---SNSPSAYAARPVPTVSSDAPATQIPNQGLETDQSDSEMMDERCHGVGEEECLIRRTLAAHLDYVYTQKHKP
        M SKF +F CLIFLLLL   +  P A+AARP P  +S      +P QGL+ +Q+DSE MDE+C GV EEECLIRRTLAAHLDYVYTQKH P
Subjt:  MASKFITFLCLIFLLLL---SNSPSAYAARPVPTVSSDAPATQIPNQGLETDQSDSEMMDERCHGVGEEECLIRRTLAAHLDYVYTQKHKP

A0A6J1KP44 Phytosulfokine-beta1.4e-3897.75Show/hide
Query:  MASKFITFLCLIF-LLLLSNSPSAYAARPVPTVSSDAPATQIPNQGLETDQSDSEMMDERCHGVGEEECLIRRTLAAHLDYVYTQKHKP
        MASKFITFLCLIF LLLLSNSPSAYAARPVPTVSSDAPATQIPNQ LETDQSDSEMMDERCHGVGEEECLIRRTLAAHLDYVYTQKHKP
Subjt:  MASKFITFLCLIF-LLLLSNSPSAYAARPVPTVSSDAPATQIPNQGLETDQSDSEMMDERCHGVGEEECLIRRTLAAHLDYVYTQKHKP

SwissProt top hitse value%identityAlignment
O81003 Phytosulfokines 28.1e-0741.25Show/hide
Query:  LIFLLLLSNSPSAYAARPVPTVSSDAPATQIP---NQGLETDQSDSEMMDERCHGVGEEECLIRRTLAAHLDYVYTQKHK
        L+ + LL  S     ARP P +S        P    + +E    D  M+DE C G  +E+CL+RRTL AH DY+YTQK K
Subjt:  LIFLLLLSNSPSAYAARPVPTVSSDAPATQIP---NQGLETDQSDSEMMDERCHGVGEEECLIRRTLAAHLDYVYTQKHK

Q9AR88 Phytosulfokines 41.6e-0743.59Show/hide
Query:  LCLIFLLLLSNSPSAYAARPVPTVSSDAPATQIPNQGLETDQSDSEMMDERCHGVGEEECLIRRTLAAHLDYVYTQKH
        L ++ +   S++  A A RP PT S D  A Q   Q        SE+      G GEEECL RRTL AH DY+YTQ+H
Subjt:  LCLIFLLLLSNSPSAYAARPVPTVSSDAPATQIPNQGLETDQSDSEMMDERCHGVGEEECLIRRTLAAHLDYVYTQKH

Q9FEB4 Phytosulfokines 51.5e-0847.67Show/hide
Query:  KFITFLCLIFLLLLSNSPSAYAARPVPTVSSDAPATQIPNQGLETDQSDSEMMDERCHGVGEEEC-LIRRTLAAHLDYVYTQKHKP
        KF TFLC+I LLL S    A +AR  PT       +  P +         E++   C GVGEEEC LIRRTL AH DY+YTQ H P
Subjt:  KFITFLCLIFLLLLSNSPSAYAARPVPTVSSDAPATQIPNQGLETDQSDSEMMDERCHGVGEEEC-LIRRTLAAHLDYVYTQKHKP

Q9FS10 Phytosulfokines1.6e-1046.59Show/hide
Query:  MASKFITFLCLIFLLLLSNSPSAYAARPVPTVSSDAPATQIPNQGLETDQSDSEMMDERCHGVGEEECLIRRTLAAHLDYVYTQKHKP
        M+SK IT L +  L  LS    A AARP+    S      IP           ++ DE C GVGEEECL+RRTL AH+DY+YTQ H P
Subjt:  MASKFITFLCLIFLLLLSNSPSAYAARPVPTVSSDAPATQIPNQGLETDQSDSEMMDERCHGVGEEECLIRRTLAAHLDYVYTQKHKP

Q9M2Y0 Phytosulfokines 31.7e-0940.74Show/hide
Query:  FLCLIFLLLLSNSPSAYAARPVPTVSSDAPATQIPNQGLETDQSDSEMMDERCHGVGEEECLIRRTLAAHLDYVYTQKHKP
        F  +  + LL  S   YAAR  PT +     T +  +    +    ++ +E C+G+GEEECLIRR+L  H DY+YTQ HKP
Subjt:  FLCLIFLLLLSNSPSAYAARPVPTVSSDAPATQIPNQGLETDQSDSEMMDERCHGVGEEECLIRRTLAAHLDYVYTQKHKP

Arabidopsis top hitse value%identityAlignment
AT1G13590.1 phytosulfokine 1 precursor3.9e-0436.9Show/hide
Query:  ITFLCLIFLLLLSNS----PSAYA-ARPVPTVSSDAPATQIPNQGLETDQSDSEMMDERCHGVGEEECLIRRTLAAHLDYVYTQ
        I F  L+ LL +++S       +A  +P PT    A +T+    G+E   SDS           EEECL+++T+AAH DY+YTQ
Subjt:  ITFLCLIFLLLLSNS----PSAYA-ARPVPTVSSDAPATQIPNQGLETDQSDSEMMDERCHGVGEEECLIRRTLAAHLDYVYTQ

AT2G22860.1 phytosulfokine 2 precursor5.8e-0841.25Show/hide
Query:  LIFLLLLSNSPSAYAARPVPTVSSDAPATQIP---NQGLETDQSDSEMMDERCHGVGEEECLIRRTLAAHLDYVYTQKHK
        L+ + LL  S     ARP P +S        P    + +E    D  M+DE C G  +E+CL+RRTL AH DY+YTQK K
Subjt:  LIFLLLLSNSPSAYAARPVPTVSSDAPATQIP---NQGLETDQSDSEMMDERCHGVGEEECLIRRTLAAHLDYVYTQKHK

AT3G49780.1 phytosulfokine 4 precursor1.2e-1040.74Show/hide
Query:  FLCLIFLLLLSNSPSAYAARPVPTVSSDAPATQIPNQGLETDQSDSEMMDERCHGVGEEECLIRRTLAAHLDYVYTQKHKP
        F  +  + LL  S   YAAR  PT +     T +  +    +    ++ +E C+G+GEEECLIRR+L  H DY+YTQ HKP
Subjt:  FLCLIFLLLLSNSPSAYAARPVPTVSSDAPATQIPNQGLETDQSDSEMMDERCHGVGEEECLIRRTLAAHLDYVYTQKHKP

AT4G37720.1 phytosulfokine 6 precursor5.4e-0638.36Show/hide
Query:  LLLSNSPSAYAARPVPTVSSDAPATQIPNQGLETDQSD-SEMMDERCHGVGEEECLIRRTLAAHLDYVYTQKH
        LLL  +    +ARP P   +    +      LE  +S   E+  E C    +E+CL+RRTL AHLDY+YT K+
Subjt:  LLLSNSPSAYAARPVPTVSSDAPATQIPNQGLETDQSD-SEMMDERCHGVGEEECLIRRTLAAHLDYVYTQKH

AT5G65870.1 phytosulfokine 5 precursor1.0e-0947.67Show/hide
Query:  KFITFLCLIFLLLLSNSPSAYAARPVPTVSSDAPATQIPNQGLETDQSDSEMMDERCHGVGEEEC-LIRRTLAAHLDYVYTQKHKP
        KF TFLC+I LLL S    A +AR  PT       +  P +         E++   C GVGEEEC LIRRTL AH DY+YTQ H P
Subjt:  KFITFLCLIFLLLLSNSPSAYAARPVPTVSSDAPATQIPNQGLETDQSDSEMMDERCHGVGEEEC-LIRRTLAAHLDYVYTQKHKP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTAAATTCATCACCTTTCTCTGCCTAATCTTCCTCCTCCTCCTCTCCAACAGCCCGTCTGCCTACGCTGCCCGCCCCGTTCCCACCGTTTCATCCGATGCACC
AGCTACCCAAATCCCAAATCAGGGGTTGGAAACAGATCAAAGTGATAGTGAGATGATGGATGAGAGGTGCCATGGAGTTGGGGAAGAAGAGTGCTTGATCAGACGAACTC
TAGCTGCCCACTTAGATTATGTGTATACTCAAAAGCATAAGCCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTAAATTCATCACCTTTCTCTGCCTAATCTTCCTCCTCCTCCTCTCCAACAGCCCGTCTGCCTACGCTGCCCGCCCCGTTCCCACCGTTTCATCCGATGCACC
AGCTACCCAAATCCCAAATCAGGGGTTGGAAACAGATCAAAGTGATAGTGAGATGATGGATGAGAGGTGCCATGGAGTTGGGGAAGAAGAGTGCTTGATCAGACGAACTC
TAGCTGCCCACTTAGATTATGTGTATACTCAAAAGCATAAGCCATAG
Protein sequenceShow/hide protein sequence
MASKFITFLCLIFLLLLSNSPSAYAARPVPTVSSDAPATQIPNQGLETDQSDSEMMDERCHGVGEEECLIRRTLAAHLDYVYTQKHKP