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Carg18536 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18536
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionVQ domain-containing protein
Genome locationCarg_Chr07:2853137..2853628
RNA-Seq ExpressionCarg18536
SyntenyCarg18536
Gene Ontology termsNA
InterPro domainsIPR008889 - VQ
IPR039610 - VQ motif-containing protein 29


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594962.1 VQ motif-containing protein 29, partial [Cucurbita argyrosperma subsp. sororia]2.9e-8499.39Show/hide
Query:  MEAFCAYASSSSSSSSTFLSQKNGQSEHVRREVSSHSNDLLCVRKPISKPWKKPAIAPLPPTRPRVYKVDSLKFKDLVQKLTGLPELPSPRLQKMAPPPL
        MEAFCAYASSSSSSSSTFLSQKNGQSEHVRREVSSHSNDLLCVRKPISKPWKKPAIAPLPPTRPRVYKVDSLKFKDLVQKLTGLPELPSPRLQKMAPPPL
Subjt:  MEAFCAYASSSSSSSSTFLSQKNGQSEHVRREVSSHSNDLLCVRKPISKPWKKPAIAPLPPTRPRVYKVDSLKFKDLVQKLTGLPELPSPRLQKMAPPPL

Query:  HIAPRQSSGAAVEATPFLHPSPVKLDEAFDGGSFLELNLSPFNKNWFSFPALSPGSLAIFDAI
        HIAPRQSSGAAVEATPFLHPSPVKLDEAFDGGSFLELN SPFNKNWFSFPALSPGSLAIFDAI
Subjt:  HIAPRQSSGAAVEATPFLHPSPVKLDEAFDGGSFLELNLSPFNKNWFSFPALSPGSLAIFDAI

KAG7026923.1 VQ motif-containing protein 29, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-84100Show/hide
Query:  MEAFCAYASSSSSSSSTFLSQKNGQSEHVRREVSSHSNDLLCVRKPISKPWKKPAIAPLPPTRPRVYKVDSLKFKDLVQKLTGLPELPSPRLQKMAPPPL
        MEAFCAYASSSSSSSSTFLSQKNGQSEHVRREVSSHSNDLLCVRKPISKPWKKPAIAPLPPTRPRVYKVDSLKFKDLVQKLTGLPELPSPRLQKMAPPPL
Subjt:  MEAFCAYASSSSSSSSTFLSQKNGQSEHVRREVSSHSNDLLCVRKPISKPWKKPAIAPLPPTRPRVYKVDSLKFKDLVQKLTGLPELPSPRLQKMAPPPL

Query:  HIAPRQSSGAAVEATPFLHPSPVKLDEAFDGGSFLELNLSPFNKNWFSFPALSPGSLAIFDAI
        HIAPRQSSGAAVEATPFLHPSPVKLDEAFDGGSFLELNLSPFNKNWFSFPALSPGSLAIFDAI
Subjt:  HIAPRQSSGAAVEATPFLHPSPVKLDEAFDGGSFLELNLSPFNKNWFSFPALSPGSLAIFDAI

XP_022963195.1 uncharacterized protein LOC111463479 [Cucurbita moschata]7.2e-8398.16Show/hide
Query:  MEAFCAYASSSSSSSSTFLSQKNGQSEHVRREVSSHSNDLLCVRKPISKPWKKPAIAPLPPTRPRVYKVDSLKFKDLVQKLTGLPELPSPRLQKMAPPPL
        MEAFCAYASSSSSSSSTFLSQKNGQSE+VRREVSS+SNDLLCVRKPISKPWKKPAIAPLPPTRPRVYKVDSLKFKDLVQKLTGLPELPSPRLQKMAPPPL
Subjt:  MEAFCAYASSSSSSSSTFLSQKNGQSEHVRREVSSHSNDLLCVRKPISKPWKKPAIAPLPPTRPRVYKVDSLKFKDLVQKLTGLPELPSPRLQKMAPPPL

Query:  HIAPRQSSGAAVEATPFLHPSPVKLDEAFDGGSFLELNLSPFNKNWFSFPALSPGSLAIFDAI
        HIAPRQ SGAAVEATPFLHPSPVKLDEAFDGGSFLELNLSPFNKNWFSFPALSPGSLAIFDAI
Subjt:  HIAPRQSSGAAVEATPFLHPSPVKLDEAFDGGSFLELNLSPFNKNWFSFPALSPGSLAIFDAI

XP_023003494.1 uncharacterized protein LOC111497090 [Cucurbita maxima]4.4e-8095.09Show/hide
Query:  MEAFCAYASSSSSSSSTFLSQKNGQSEHVRREVSSHSNDLLCVRKPISKPWKKPAIAPLPPTRPRVYKVDSLKFKDLVQKLTGLPELPSPRLQKMAPPPL
        MEAFCAYASSSSSSSS+FL+Q+NGQSEHVR EVSS+SNDLLCVRK ISKPWKKPAIAPLPPTRPRVYKVDSLKFKDLVQKLTGLPELPSPRLQKMAPPPL
Subjt:  MEAFCAYASSSSSSSSTFLSQKNGQSEHVRREVSSHSNDLLCVRKPISKPWKKPAIAPLPPTRPRVYKVDSLKFKDLVQKLTGLPELPSPRLQKMAPPPL

Query:  HIAPRQSSGAAVEATPFLHPSPVKLDEAFDGGSFLELNLSPFNKNWFSFPALSPGSLAIFDAI
        HIAPRQ S AAVEATPFLHPSPVKLDEAFDGGSFLELNLSPFNKNWFSFPALSPGSLAIFDAI
Subjt:  HIAPRQSSGAAVEATPFLHPSPVKLDEAFDGGSFLELNLSPFNKNWFSFPALSPGSLAIFDAI

XP_023518129.1 uncharacterized protein LOC111781674 [Cucurbita pepo subsp. pepo]1.2e-8095.71Show/hide
Query:  MEAFCAYASSSSSSSSTFLSQKNGQSEHVRREVSSHSNDLLCVRKPISKPWKKPAIAPLPPTRPRVYKVDSLKFKDLVQKLTGLPELPSPRLQKMAPPPL
        MEAFCAYASSSSSSSSTFL +K GQSEHVRREVSS+SNDLLCVRKPISKPWKKPAIAPLPPTRPRVYKVDSLKFKDLVQKLTGLPELPSPRLQKMAPPPL
Subjt:  MEAFCAYASSSSSSSSTFLSQKNGQSEHVRREVSSHSNDLLCVRKPISKPWKKPAIAPLPPTRPRVYKVDSLKFKDLVQKLTGLPELPSPRLQKMAPPPL

Query:  HIAPRQSSGAAVEATPFLHPSPVKLDEAFDGGSFLELNLSPFNKNWFSFPALSPGSLAIFDAI
        HIAPRQ SG AVEATPFLHPSPVKLDEA DGGSFLELNLSPFNKNWFSFPALSPGSLAIFDAI
Subjt:  HIAPRQSSGAAVEATPFLHPSPVKLDEAFDGGSFLELNLSPFNKNWFSFPALSPGSLAIFDAI

TrEMBL top hitse value%identityAlignment
A0A0A0KJR2 VQ domain-containing protein1.7e-5372.62Show/hide
Query:  MEAFCAYASSSSSSSSTFLSQKNGQSEH--VRREVSSHS-NDLLCVRKPISKPWKKPAIAPLPPTRPRVYKVDSLKFKDLVQKLTGLPELPSPRLQKMAP
        M+AFCAY SSSSSSSS+FL++KN QSEH  V+RE+SS+S N++ CVRKP+ KPWKKPAIAPLPPTRPRVYKVD + F+ LVQKLTGL EL SPRLQKMAP
Subjt:  MEAFCAYASSSSSSSSTFLSQKNGQSEH--VRREVSSHS-NDLLCVRKPISKPWKKPAIAPLPPTRPRVYKVDSLKFKDLVQKLTGLPELPSPRLQKMAP

Query:  PPLHIAPRQSS-GAAVEATPFLHPSPVKLD-EAFDGGSFLELNLSPFNKNWFSFPALSPGSLAIFDAI
        PPL I+ RQ S  AAVE T F   S +K++ EA DGG FLELNLSPFNKNW SFPALSP +LAI DAI
Subjt:  PPLHIAPRQSS-GAAVEATPFLHPSPVKLD-EAFDGGSFLELNLSPFNKNWFSFPALSPGSLAIFDAI

A0A1S3B142 uncharacterized protein LOC1034848697.1e-5270Show/hide
Query:  MEAFCAYASSSSSSSSTFLSQKNGQSEH--VRREVSSHS---NDLLCVRKPISKPWKKPAIAPLPPTRPRVYKVDSLKFKDLVQKLTGLPELPSPRLQKM
        M+AFCAY SSSSSSSS+FL++KN QSEH  V+RE S++S   N++ CVRKP++KPWKKPAIAPLPPTRPRVYKVD + F+ LVQKLTGL EL SPRLQKM
Subjt:  MEAFCAYASSSSSSSSTFLSQKNGQSEH--VRREVSSHS---NDLLCVRKPISKPWKKPAIAPLPPTRPRVYKVDSLKFKDLVQKLTGLPELPSPRLQKM

Query:  APPPLHIAPRQSS-GAAVEATPFLHPSPVKLD-EAFDGGSFLELNLSPFNKNWFSFPALSPGSLAIFDAI
        APPPL I+ RQ +  AAVE T F     +K++ EA DGG FLELNLSPFNKNW SFPALSP +LAI DAI
Subjt:  APPPLHIAPRQSS-GAAVEATPFLHPSPVKLD-EAFDGGSFLELNLSPFNKNWFSFPALSPGSLAIFDAI

A0A6J1GE45 uncharacterized protein LOC1114533301.6e-5675.61Show/hide
Query:  MEAFCAYASSSSSSSSTFLSQKNGQSEHVRREVSSHS-NDLLCVRKPISKPWKKPAIAPLPPTRPRVYKVDSLKFKDLVQKLTGLPELPSPRLQKMAPPP
        MEAFCAY SSSSSSSS+FL+QK  QSE VRRE SS+S N+L CVRK ++KPWKKPAIAPLPPTRPRVYKVD L F++LVQKLTGL EL SPRLQKMAPPP
Subjt:  MEAFCAYASSSSSSSSTFLSQKNGQSEHVRREVSSHS-NDLLCVRKPISKPWKKPAIAPLPPTRPRVYKVDSLKFKDLVQKLTGLPELPSPRLQKMAPPP

Query:  LHIAPRQSSGAAVEATPFLHPSPVKLDEAFDGGSFLELNLSPFNKNWFSFPALSPGSLAIFDAI
        L IA    S  AV     L P PV+LDEA DGGSFLELNLSPFNKNW SFPALSP SLA+ DAI
Subjt:  LHIAPRQSSGAAVEATPFLHPSPVKLDEAFDGGSFLELNLSPFNKNWFSFPALSPGSLAIFDAI

A0A6J1HHA9 uncharacterized protein LOC1114634793.5e-8398.16Show/hide
Query:  MEAFCAYASSSSSSSSTFLSQKNGQSEHVRREVSSHSNDLLCVRKPISKPWKKPAIAPLPPTRPRVYKVDSLKFKDLVQKLTGLPELPSPRLQKMAPPPL
        MEAFCAYASSSSSSSSTFLSQKNGQSE+VRREVSS+SNDLLCVRKPISKPWKKPAIAPLPPTRPRVYKVDSLKFKDLVQKLTGLPELPSPRLQKMAPPPL
Subjt:  MEAFCAYASSSSSSSSTFLSQKNGQSEHVRREVSSHSNDLLCVRKPISKPWKKPAIAPLPPTRPRVYKVDSLKFKDLVQKLTGLPELPSPRLQKMAPPPL

Query:  HIAPRQSSGAAVEATPFLHPSPVKLDEAFDGGSFLELNLSPFNKNWFSFPALSPGSLAIFDAI
        HIAPRQ SGAAVEATPFLHPSPVKLDEAFDGGSFLELNLSPFNKNWFSFPALSPGSLAIFDAI
Subjt:  HIAPRQSSGAAVEATPFLHPSPVKLDEAFDGGSFLELNLSPFNKNWFSFPALSPGSLAIFDAI

A0A6J1KTH5 uncharacterized protein LOC1114970902.1e-8095.09Show/hide
Query:  MEAFCAYASSSSSSSSTFLSQKNGQSEHVRREVSSHSNDLLCVRKPISKPWKKPAIAPLPPTRPRVYKVDSLKFKDLVQKLTGLPELPSPRLQKMAPPPL
        MEAFCAYASSSSSSSS+FL+Q+NGQSEHVR EVSS+SNDLLCVRK ISKPWKKPAIAPLPPTRPRVYKVDSLKFKDLVQKLTGLPELPSPRLQKMAPPPL
Subjt:  MEAFCAYASSSSSSSSTFLSQKNGQSEHVRREVSSHSNDLLCVRKPISKPWKKPAIAPLPPTRPRVYKVDSLKFKDLVQKLTGLPELPSPRLQKMAPPPL

Query:  HIAPRQSSGAAVEATPFLHPSPVKLDEAFDGGSFLELNLSPFNKNWFSFPALSPGSLAIFDAI
        HIAPRQ S AAVEATPFLHPSPVKLDEAFDGGSFLELNLSPFNKNWFSFPALSPGSLAIFDAI
Subjt:  HIAPRQSSGAAVEATPFLHPSPVKLDEAFDGGSFLELNLSPFNKNWFSFPALSPGSLAIFDAI

SwissProt top hitse value%identityAlignment
Q9SZG3 VQ motif-containing protein 292.6e-0645.45Show/hide
Query:  SSSSTFLSQK--NGQSEHVRREVSSHSNDLLCVRKPISKPWKKPAI-APLPPTRPRVYKVDSLKFKDLVQKLTGLPE
        ++S  F+SQ   N Q E   R   ++   L   RK  SKP K+PAI +PL P  P VY+V+ + FK LVQ+LTG PE
Subjt:  SSSSTFLSQK--NGQSEHVRREVSSHSNDLLCVRKPISKPWKKPAI-APLPPTRPRVYKVDSLKFKDLVQKLTGLPE

Arabidopsis top hitse value%identityAlignment
AT2G22880.1 VQ motif-containing protein1.5e-0632.63Show/hide
Query:  SHSNDLLCVRKPISKPWKKPAIAPLPPTRPRVYKVDSLKFKDLVQKLTGLPELPSPRLQKMAPPPLHIAPRQSSGAAVEATPFLHPSPVKLDEAF
        SH++ L   RK  +KPWKKP         P+VY+V+ + FK+LVQ+LTG  ++    + ++   P+ I+   ++         L PS  +  EAF
Subjt:  SHSNDLLCVRKPISKPWKKPAIAPLPPTRPRVYKVDSLKFKDLVQKLTGLPELPSPRLQKMAPPPLHIAPRQSSGAAVEATPFLHPSPVKLDEAF

AT4G37710.1 VQ motif-containing protein1.8e-0745.45Show/hide
Query:  SSSSTFLSQK--NGQSEHVRREVSSHSNDLLCVRKPISKPWKKPAI-APLPPTRPRVYKVDSLKFKDLVQKLTGLPE
        ++S  F+SQ   N Q E   R   ++   L   RK  SKP K+PAI +PL P  P VY+V+ + FK LVQ+LTG PE
Subjt:  SSSSTFLSQK--NGQSEHVRREVSSHSNDLLCVRKPISKPWKKPAI-APLPPTRPRVYKVDSLKFKDLVQKLTGLPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCATTTTGTGCTTATGCTTCTTCTTCTTCTTCGTCTTCCTCGACCTTTTTGTCTCAGAAAAATGGGCAATCGGAGCACGTGAGGAGAGAAGTTTCAAGCCATTC
CAACGATCTTCTCTGTGTTCGAAAGCCAATATCGAAACCCTGGAAGAAGCCGGCGATTGCGCCACTGCCACCGACTCGCCCCAGGGTCTACAAAGTGGACTCACTTAAAT
TCAAAGATTTGGTTCAGAAACTCACCGGCTTGCCTGAGCTCCCATCTCCACGCCTCCAAAAAATGGCTCCGCCTCCTCTTCATATTGCCCCCCGCCAAAGTTCCGGCGCC
GCCGTGGAAGCCACCCCATTTCTACATCCGTCGCCGGTGAAGCTGGATGAGGCGTTCGACGGTGGCAGCTTTCTTGAGCTGAATTTGTCGCCCTTCAACAAAAATTGGTT
CTCCTTCCCTGCTTTGAGCCCTGGAAGCCTTGCCATTTTCGATGCAATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGCATTTTGTGCTTATGCTTCTTCTTCTTCTTCGTCTTCCTCGACCTTTTTGTCTCAGAAAAATGGGCAATCGGAGCACGTGAGGAGAGAAGTTTCAAGCCATTC
CAACGATCTTCTCTGTGTTCGAAAGCCAATATCGAAACCCTGGAAGAAGCCGGCGATTGCGCCACTGCCACCGACTCGCCCCAGGGTCTACAAAGTGGACTCACTTAAAT
TCAAAGATTTGGTTCAGAAACTCACCGGCTTGCCTGAGCTCCCATCTCCACGCCTCCAAAAAATGGCTCCGCCTCCTCTTCATATTGCCCCCCGCCAAAGTTCCGGCGCC
GCCGTGGAAGCCACCCCATTTCTACATCCGTCGCCGGTGAAGCTGGATGAGGCGTTCGACGGTGGCAGCTTTCTTGAGCTGAATTTGTCGCCCTTCAACAAAAATTGGTT
CTCCTTCCCTGCTTTGAGCCCTGGAAGCCTTGCCATTTTCGATGCAATTTAG
Protein sequenceShow/hide protein sequence
MEAFCAYASSSSSSSSTFLSQKNGQSEHVRREVSSHSNDLLCVRKPISKPWKKPAIAPLPPTRPRVYKVDSLKFKDLVQKLTGLPELPSPRLQKMAPPPLHIAPRQSSGA
AVEATPFLHPSPVKLDEAFDGGSFLELNLSPFNKNWFSFPALSPGSLAIFDAI