; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg18547 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18547
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description60S ribosomal protein L26
Genome locationCarg_Chr07:2900590..2901030
RNA-Seq ExpressionCarg18547
SyntenyCarg18547
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0042273 - ribosomal large subunit biogenesis (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR005756 - Ribosomal protein L26/L24, eukaryotic/archaeal
IPR005824 - KOW
IPR005825 - Ribosomal protein L24/L26, conserved site
IPR008991 - Translation protein SH3-like domain superfamily
IPR014722 - Ribosomal protein L2, domain 2
IPR041988 - Ribosomal protein L26/L24, KOW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141862.1 60S ribosomal protein L26-1 [Cucumis sativus]2.4e-6997.26Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLS DLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKW+IHIERITREKVNGSTVNVGI P
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFSAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKF+AEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFSAEDIMQSVD

XP_022950899.1 60S ribosomal protein L26-1 [Cucurbita moschata]1.8e-6997.26Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLS DLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYR+KWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFSAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKGKGRAA+DKDKGTKF+AEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFSAEDIMQSVD

XP_022963400.1 60S ribosomal protein L26-1-like [Cucurbita moschata]3.3e-71100Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFSAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFSAEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFSAEDIMQSVD

XP_028772784.1 60S ribosomal protein L26-1-like [Prosopis alba]1.8e-6997.26Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKSRKAHF+APSSVRRVIMSAPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGR+GKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFSAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRK KGRAAADKDKGTKF+AEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFSAEDIMQSVD

XP_038880918.1 60S ribosomal protein L26-1 [Benincasa hispida]3.1e-6997.26Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKSRKAHF+APSSVRRVIMSAPLS+DLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGI P
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFSAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKF+AEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFSAEDIMQSVD

TrEMBL top hitse value%identityAlignment
A0A5D3CR35 Ribosomal protein L26/L24P, eukaryotic/archaeal1.2e-6997.26Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLS DLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKW+IHIERITREKVNGSTVNVGI P
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFSAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKF+AEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFSAEDIMQSVD

A0A6J1GH60 60S ribosomal protein L26-18.9e-7097.26Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLS DLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYR+KWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFSAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKGKGRAA+DKDKGTKF+AEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFSAEDIMQSVD

A0A6J1HHW6 60S ribosomal protein L26-1-like1.6e-71100Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFSAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFSAEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFSAEDIMQSVD

A0A6J1INB1 60S ribosomal protein L26-18.9e-7097.26Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLS DLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYR+KWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFSAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKGKGRAA+DKDKGTKF+AEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFSAEDIMQSVD

A0A6J1KU52 60S ribosomal protein L26-1-like1.6e-71100Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFSAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFSAEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFSAEDIMQSVD

SwissProt top hitse value%identityAlignment
P51414 60S ribosomal protein L26-15.7e-6687.67Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRV+SSRRK+RKAHF+A SS RRVIMS+PLS DLR KYNVRSMPIRKDDEVQ+VRGTYKGREGKVVQVYRRKWVIHIERITREKVNG+TVNVGI P
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFSAEDIMQSVD
        SKVVITKLRLDKDRKSLL+RK KGRAAADK+KGTKF++ED+MQ+VD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFSAEDIMQSVD

P61254 60S ribosomal protein L262.1e-4468.31Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGIN
        MK+NP V+S R K+RK HF+APS +RR IMS+PLS +LR KYNVRSMPIRKDDEVQVVRG YKG++ GKVVQVYR+K+VI+IER+ REK NG+TV+VGI+
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGIN

Query:  PSKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFSAEDI
        PSKVVIT+L+LDKDRK +L+RK K R    K+KG K+  E I
Subjt:  PSKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFSAEDI

P61257 60S ribosomal protein L262.1e-4468.31Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGIN
        MK+NP V+S R K+RK HF+APS +RR IMS+PLS +LR KYNVRSMPIRKDDEVQVVRG YKG++ GKVVQVYR+K+VI+IER+ REK NG+TV+VGI+
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGIN

Query:  PSKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFSAEDI
        PSKVVIT+L+LDKDRK +L+RK K R    K+KG K+  E I
Subjt:  PSKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFSAEDI

Q39411 60S ribosomal protein L263.6e-6081.38Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRV+SSRR++RK HF+A SS RRV MS+PLS DLR KYNVRSMPIRKDDE Q+VRGTYKGREGK+ QVYRRK VIHIER+TREKVNG+TVNVG+ P
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFSAEDIMQSV
        +KVVITKLRLDKDRKSLL+RK KGRAAADKDKGTKF+A D+MQ+V
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFSAEDIMQSV

Q9FJX2 60S ribosomal protein L26-26.3e-6585.62Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MK+NPRVSSSRRK+RKAHF+APSSVRRV+MS+PLS DLR+K+NVRSMPIRKDDEVQVVRGT+KGREGKV+QVYRRKWVIHIERITREKVNGSTVNVG+N 
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFSAEDIMQSVD
        S V+ITKLRLDKDRKSLL+RK  GRAAADK+KGTKFSAED+M++VD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFSAEDIMQSVD

Arabidopsis top hitse value%identityAlignment
AT3G49910.1 Translation protein SH3-like family protein4.1e-6787.67Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MKYNPRV+SSRRK+RKAHF+A SS RRVIMS+PLS DLR KYNVRSMPIRKDDEVQ+VRGTYKGREGKVVQVYRRKWVIHIERITREKVNG+TVNVGI P
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFSAEDIMQSVD
        SKVVITKLRLDKDRKSLL+RK KGRAAADK+KGTKF++ED+MQ+VD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFSAEDIMQSVD

AT5G67510.1 Translation protein SH3-like family protein4.5e-6685.62Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP
        MK+NPRVSSSRRK+RKAHF+APSSVRRV+MS+PLS DLR+K+NVRSMPIRKDDEVQVVRGT+KGREGKV+QVYRRKWVIHIERITREKVNGSTVNVG+N 
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFSAEDIMQSVD
        S V+ITKLRLDKDRKSLL+RK  GRAAADK+KGTKFSAED+M++VD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFSAEDIMQSVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTACAACCCTAGGGTTTCCAGTTCCCGCCGCAAGAGCCGCAAGGCTCATTTTTCTGCGCCGTCGAGCGTTCGTCGGGTTATTATGAGTGCTCCTCTCTCGAATGA
CCTCCGGTCAAAGTACAATGTCCGATCCATGCCGATTAGGAAGGATGATGAGGTCCAAGTTGTCCGTGGAACTTACAAGGGCCGGGAAGGCAAGGTAGTGCAGGTGTACC
GTAGAAAGTGGGTCATCCACATTGAGCGAATCACTCGTGAGAAGGTTAATGGATCCACTGTCAATGTCGGCATCAACCCCTCGAAGGTCGTGATTACAAAGCTCAGGCTG
GACAAGGACCGCAAGTCACTTCTGGATCGTAAAGGTAAGGGCCGTGCTGCCGCTGACAAGGACAAGGGGACCAAGTTCTCCGCAGAGGATATCATGCAGAGCGTCGATTA
A
mRNA sequenceShow/hide mRNA sequence
ATGAAGTACAACCCTAGGGTTTCCAGTTCCCGCCGCAAGAGCCGCAAGGCTCATTTTTCTGCGCCGTCGAGCGTTCGTCGGGTTATTATGAGTGCTCCTCTCTCGAATGA
CCTCCGGTCAAAGTACAATGTCCGATCCATGCCGATTAGGAAGGATGATGAGGTCCAAGTTGTCCGTGGAACTTACAAGGGCCGGGAAGGCAAGGTAGTGCAGGTGTACC
GTAGAAAGTGGGTCATCCACATTGAGCGAATCACTCGTGAGAAGGTTAATGGATCCACTGTCAATGTCGGCATCAACCCCTCGAAGGTCGTGATTACAAAGCTCAGGCTG
GACAAGGACCGCAAGTCACTTCTGGATCGTAAAGGTAAGGGCCGTGCTGCCGCTGACAAGGACAAGGGGACCAAGTTCTCCGCAGAGGATATCATGCAGAGCGTCGATTA
A
Protein sequenceShow/hide protein sequence
MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSNDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRL
DKDRKSLLDRKGKGRAAADKDKGTKFSAEDIMQSVD