CuGenDBv2

Gene ID	Carg18558
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	LOB domain-containing protein
Genome location	Carg_Chr07:2957023..2958187
RNA-Seq Expression	Carg18558
Synteny	Carg18558
Gene Ontology terms	GO:0010468 - regulation of gene expression (biological process)
InterPro domains	IPR004883 - Lateral organ boundaries, LOB

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0036429.1 LOB domain-containing protein 37-like [Cucumis melo var. makuwa]

2.5e-116

90.64

Show/hide

Query:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
        MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWH+CQAAV+T
Subjt:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET

Query:  VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEE-STKNKLNDLDLRLTPTFPAKSTRRAATPSMNSEES
        VLRGGTLRP+N+FLAAGSPN ASD+TSE EVACTDMWK+RDSYPNSRFSNSRSRLSPKRKRSEE STK++LNDLDLRLTPTFPAKST RAATPSMNSEES
Subjt:  VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEE-STKNKLNDLDLRLTPTFPAKSTRRAATPSMNSEES

Query:  ETTTCFESGGLIDHHHRHYHPEELVPERKLLNLFV
        ETTTCFES GL D+HH H++PEE   +RKLLNLFV
Subjt:  ETTTCFESGGLIDHHHRHYHPEELVPERKLLNLFV

KAG6594987.1 LOB domain-containing protein 38, partial [Cucurbita argyrosperma subsp. sororia]

2.1e-131

100

Show/hide

Query:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
        MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
Subjt:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET

Query:  VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNKLNDLDLRLTPTFPAKSTRRAATPSMNSEESE
        VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNKLNDLDLRLTPTFPAKSTRRAATPSMNSEESE
Subjt:  VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNKLNDLDLRLTPTFPAKSTRRAATPSMNSEESE

Query:  TTTCFESGGLIDHHHRHYHPEELVPERKLLNLFV
        TTTCFESGGLIDHHHRHYHPEELVPERKLLNLFV
Subjt:  TTTCFESGGLIDHHHRHYHPEELVPERKLLNLFV

XP_022963426.1 LOB domain-containing protein 37-like [Cucurbita moschata]

1.9e-129

98.29

Show/hide

Query:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
        MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
Subjt:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET

Query:  VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNKLNDLDLRLTPTFPAKSTRRAATPSMNSEESE
        VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKN+LNDLDLRLTP FPAKSTRRAATPSMNSEESE
Subjt:  VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNKLNDLDLRLTPTFPAKSTRRAATPSMNSEESE

Query:  TTTCFESGGLIDHHHRHYHPEELVPERKLLNLFV
        TTTCFESGGL+DHHHR+YHPEELVPERKLLNLFV
Subjt:  TTTCFESGGLIDHHHRHYHPEELVPERKLLNLFV

XP_023003010.1 LOB domain-containing protein 37-like [Cucurbita maxima]

1.9e-129

97.86

Show/hide

Query:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
        MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
Subjt:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET

Query:  VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNKLNDLDLRLTPTFPAKSTRRAATPSMNSEESE
        VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKN+LNDLDLRLTP FPAKSTRRAATPSMNSEESE
Subjt:  VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNKLNDLDLRLTPTFPAKSTRRAATPSMNSEESE

Query:  TTTCFESGGLIDHHHRHYHPEELVPERKLLNLFV
        TTTCFESGGL+DHHH HYHPEELVPERK+LNLFV
Subjt:  TTTCFESGGLIDHHHRHYHPEELVPERKLLNLFV

XP_023517275.1 LOB domain-containing protein 37-like [Cucurbita pepo subsp. pepo]

2.3e-130

99.15

Show/hide

Query:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
        MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
Subjt:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET

Query:  VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNKLNDLDLRLTPTFPAKSTRRAATPSMNSEESE
        VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKN+LNDLDLRLTP FPAKSTRRAATPSMNSEESE
Subjt:  VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNKLNDLDLRLTPTFPAKSTRRAATPSMNSEESE

Query:  TTTCFESGGLIDHHHRHYHPEELVPERKLLNLFV
        TTTCFESGGLIDHHHRHYHPEELVPERKLLNLFV
Subjt:  TTTCFESGGLIDHHHRHYHPEELVPERKLLNLFV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KJN9 LOB domain-containing protein

1.0e-115

91.06

Show/hide

Query:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
        MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWH+CQAAV+T
Subjt:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET

Query:  VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEE-STKNKLNDLDLRLTPTFPAKSTRRAATPSMNSEES
        VLRGGTLRP+N+FLAAGSPN ASD+TSE EV CTDMWK+RDSYPNSRFSNSRSRLSPKRKRSEE STK++LNDLDLRLTPTFPAKST RAATPSMNSEES
Subjt:  VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEE-STKNKLNDLDLRLTPTFPAKSTRRAATPSMNSEES

Query:  ETTTCFESGGLIDHHHRHYHPEELVPERKLLNLFV
        ETTTCFES GL D+HH HY PEE V +RKLLNLFV
Subjt:  ETTTCFESGGLIDHHHRHYHPEELVPERKLLNLFV

A0A5A7T4Z4 LOB domain-containing protein 37-like

1.2e-116

90.64

Show/hide

Query:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
        MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWH+CQAAV+T
Subjt:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET

Query:  VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEE-STKNKLNDLDLRLTPTFPAKSTRRAATPSMNSEES
        VLRGGTLRP+N+FLAAGSPN ASD+TSE EVACTDMWK+RDSYPNSRFSNSRSRLSPKRKRSEE STK++LNDLDLRLTPTFPAKST RAATPSMNSEES
Subjt:  VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEE-STKNKLNDLDLRLTPTFPAKSTRRAATPSMNSEES

Query:  ETTTCFESGGLIDHHHRHYHPEELVPERKLLNLFV
        ETTTCFES GL D+HH H++PEE   +RKLLNLFV
Subjt:  ETTTCFESGGLIDHHHRHYHPEELVPERKLLNLFV

A0A5D3CP44 LOB domain-containing protein 37-like

2.5e-114

90.21

Show/hide

Query:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
        MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWH+CQAAV+T
Subjt:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET

Query:  VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEE-STKNKLNDLDLRLTPTFPAKSTRRAATPSMNSEES
        VLRGGTLRP+N+FLAAGSPN ASD+TSE EVACTDMWK+RDSYPNSRFSNSRSRLSPKRKRSEE STK++LNDLDLRLTPTFPAKST RAATPSMNSEES
Subjt:  VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEE-STKNKLNDLDLRLTPTFPAKSTRRAATPSMNSEES

Query:  ETTTCFESGGLIDHHHRHYHPEELVPERKLLNLFV
        ETTTCFES GL D+H  H++PEE   +RKLLNLFV
Subjt:  ETTTCFESGGLIDHHHRHYHPEELVPERKLLNLFV

A0A6J1HG39 LOB domain-containing protein 37-like

9.4e-130

98.29

Show/hide

Query:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
        MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
Subjt:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET

Query:  VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNKLNDLDLRLTPTFPAKSTRRAATPSMNSEESE
        VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKN+LNDLDLRLTP FPAKSTRRAATPSMNSEESE
Subjt:  VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNKLNDLDLRLTPTFPAKSTRRAATPSMNSEESE

Query:  TTTCFESGGLIDHHHRHYHPEELVPERKLLNLFV
        TTTCFESGGL+DHHHR+YHPEELVPERKLLNLFV
Subjt:  TTTCFESGGLIDHHHRHYHPEELVPERKLLNLFV

A0A6J1KQK8 LOB domain-containing protein 37-like

9.4e-130

97.86

Show/hide

Query:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
        MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
Subjt:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET

Query:  VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNKLNDLDLRLTPTFPAKSTRRAATPSMNSEESE
        VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKN+LNDLDLRLTP FPAKSTRRAATPSMNSEESE
Subjt:  VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNKLNDLDLRLTPTFPAKSTRRAATPSMNSEESE

Query:  TTTCFESGGLIDHHHRHYHPEELVPERKLLNLFV
        TTTCFESGGL+DHHH HYHPEELVPERK+LNLFV
Subjt:  TTTCFESGGLIDHHHRHYHPEELVPERKLLNLFV

SwissProt top hits

e value

%identity

Alignment

Q9FN11 LOB domain-containing protein 37

6.6e-72

64.16

Show/hide

Query:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
        MSCNGCRVLRKGCSE+CILRPC+QWI+T++AQGHATVFVAKFFGRAGLMSFISAVP+SQRP+LFQSLL+EACGRTVNPVNGA+G+LWTGNW+ICQAAVET
Subjt:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET

Query:  VLRGGTLRPMNEFLA-----AGSPNPASDETSEAEVACTDMWKL-------RDSYPNSRFSNSRSR-----LSPKRKRSEESTKNKLNDLDLRLTPTFPA
        VLRGG+LRP+ E L      AG P+P S+E SE    CT+M  L       R+ Y +SRFS+SRSR      SP +++   S     ++LDL L P FP 
Subjt:  VLRGGTLRPMNEFLA-----AGSPNPASDETSEAEVACTDMWKL-------RDSYPNSRFSNSRSR-----LSPKRKRSEESTKNKLNDLDLRLTPTFPA

Query:  K------STRRAATPSMNSEESETTT
        K      + RR+ TPSMNSE+S TTT
Subjt:  K------STRRAATPSMNSEESETTT

Q9M886 LOB domain-containing protein 41

4.8e-38

46.7

Show/hide

Query:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
        MSCNGCRVLRKGCSE C +RPCL WI + EAQ +ATVF+AKF+GRAGLM+ I+A P   RP +F+SLL EACGR VNP+ G+VGLLW+GNW +CQ AVE 
Subjt:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET

Query:  VLRGGTLRPMNEFLAAGSPNP-----------ASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNKLN
        V++G  ++ +    A     P             D ++ A    TD+ KL  +    R S    +   + K  E S  + L+
Subjt:  VLRGGTLRPMNEFLAAGSPNP-----------ASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNKLN

Q9SN23 LOB domain-containing protein 38

8.0e-70

61.8

Show/hide

Query:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
        MSCNGCRVLRKGCSE+CILRPC+QWI++ EAQGHATVFVAKFFGRAGLMSFISAVPESQ P+LFQSLL+EACGRTVNPVNGAVGLLWTGNW++CQAAVET
Subjt:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET

Query:  VLRGGTLRPMNEFL----AAGSPNPASDETSEAEVACTDMWKLRDS--------YPNSRFSNSRSR----LSPKRKRSEESTKNKLNDLDLRLTPTFPAK
        VLRGG+L+P+ E L     AG P+P SDE SE    CT+M  LR +        Y + RFS+SRSR     SP +++   S +   ++LDL L P +P K
Subjt:  VLRGGTLRPMNEFL----AAGSPNPASDETSEAEVACTDMWKLRDS--------YPNSRFSNSRSR----LSPKRKRSEESTKNKLNDLDLRLTPTFPAK

Query:  STR-RAATPSMNSEESETTTCFESGGLIDHHHR
        +   +  TPSM SEES TT  F++    D + R
Subjt:  STR-RAATPSMNSEESETTTCFESGGLIDHHHR

Q9SZE8 LOB domain-containing protein 39

1.9e-63

55.95

Show/hide

Query:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
        MSCNGCRVLRKGCSE+CILRPCLQWI+++E+QGHATVFVAKFFGRAGLMSFIS+VPE QRP+LFQSLLFEACGRTVNPVNGAVG+LWT NWH+CQAAVET
Subjt:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET

Query:  VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWK---LRDSYPNSRFSNSRSRLSPKRKRSEESTKNKLNDLDLR----LTPTFPAK---------
        VLRGGTLRP+++ L + S   + DE+SE       +W     R+   + RFS SRS    K            +DLDL+    LT T PA          
Subjt:  VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWK---LRDSYPNSRFSNSRSRLSPKRKRSEESTKNKLNDLDLR----LTPTFPAK---------

Query:  --STRRAATPSMNSEESETTTCFESGGLIDHHHRHYHPEELVPERKLLNLFV
             +   P   SEES TT+C+E+G   D+  +         E+KLLNLFV
Subjt:  --STRRAATPSMNSEESETTTCFESGGLIDHHHRHYHPEELVPERKLLNLFV

Q9ZW96 LOB domain-containing protein 40

6.4e-43

66.36

Show/hide

Query:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
        MSCNGCRVLRKGCSE+C +RPCLQWI ++E+Q +ATVF+AKF+GRAGLM+ ++  P+  RP++F+SLL+EACGR VNP+ G+VGLLW+GNWH+CQAAVE 
Subjt:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET

Query:  VLRGGTLRPM
        V+RG  + P+
Subjt:  VLRGGTLRPM

Arabidopsis top hits

e value

%identity

Alignment

AT1G67100.1 LOB domain-containing protein 40

4.6e-44

66.36

Show/hide

Query:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
        MSCNGCRVLRKGCSE+C +RPCLQWI ++E+Q +ATVF+AKF+GRAGLM+ ++  P+  RP++F+SLL+EACGR VNP+ G+VGLLW+GNWH+CQAAVE 
Subjt:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET

Query:  VLRGGTLRPM
        V+RG  + P+
Subjt:  VLRGGTLRPM

AT3G02550.1 LOB domain-containing protein 41

3.4e-39

46.7

Show/hide

Query:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
        MSCNGCRVLRKGCSE C +RPCL WI + EAQ +ATVF+AKF+GRAGLM+ I+A P   RP +F+SLL EACGR VNP+ G+VGLLW+GNW +CQ AVE 
Subjt:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET

Query:  VLRGGTLRPMNEFLAAGSPNP-----------ASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNKLN
        V++G  ++ +    A     P             D ++ A    TD+ KL  +    R S    +   + K  E S  + L+
Subjt:  VLRGGTLRPMNEFLAAGSPNP-----------ASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNKLN

AT3G49940.1 LOB domain-containing protein 38

5.7e-71

61.8

Show/hide

Query:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
        MSCNGCRVLRKGCSE+CILRPC+QWI++ EAQGHATVFVAKFFGRAGLMSFISAVPESQ P+LFQSLL+EACGRTVNPVNGAVGLLWTGNW++CQAAVET
Subjt:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET

Query:  VLRGGTLRPMNEFL----AAGSPNPASDETSEAEVACTDMWKLRDS--------YPNSRFSNSRSR----LSPKRKRSEESTKNKLNDLDLRLTPTFPAK
        VLRGG+L+P+ E L     AG P+P SDE SE    CT+M  LR +        Y + RFS+SRSR     SP +++   S +   ++LDL L P +P K
Subjt:  VLRGGTLRPMNEFL----AAGSPNPASDETSEAEVACTDMWKLRDS--------YPNSRFSNSRSR----LSPKRKRSEESTKNKLNDLDLRLTPTFPAK

Query:  STR-RAATPSMNSEESETTTCFESGGLIDHHHR
        +   +  TPSM SEES TT  F++    D + R
Subjt:  STR-RAATPSMNSEESETTTCFESGGLIDHHHR

AT4G37540.1 LOB domain-containing protein 39

1.4e-64

55.95

Show/hide

Query:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
        MSCNGCRVLRKGCSE+CILRPCLQWI+++E+QGHATVFVAKFFGRAGLMSFIS+VPE QRP+LFQSLLFEACGRTVNPVNGAVG+LWT NWH+CQAAVET
Subjt:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET

Query:  VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWK---LRDSYPNSRFSNSRSRLSPKRKRSEESTKNKLNDLDLR----LTPTFPAK---------
        VLRGGTLRP+++ L + S   + DE+SE       +W     R+   + RFS SRS    K            +DLDL+    LT T PA          
Subjt:  VLRGGTLRPMNEFLAAGSPNPASDETSEAEVACTDMWK---LRDSYPNSRFSNSRSRLSPKRKRSEESTKNKLNDLDLR----LTPTFPAK---------

Query:  --STRRAATPSMNSEESETTTCFESGGLIDHHHRHYHPEELVPERKLLNLFV
             +   P   SEES TT+C+E+G   D+  +         E+KLLNLFV
Subjt:  --STRRAATPSMNSEESETTTCFESGGLIDHHHRHYHPEELVPERKLLNLFV

AT5G67420.1 LOB domain-containing protein 37

4.7e-73

64.16

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Query:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET
        MSCNGCRVLRKGCSE+CILRPC+QWI+T++AQGHATVFVAKFFGRAGLMSFISAVP+SQRP+LFQSLL+EACGRTVNPVNGA+G+LWTGNW+ICQAAVET
Subjt:  MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVET

Query:  VLRGGTLRPMNEFLA-----AGSPNPASDETSEAEVACTDMWKL-------RDSYPNSRFSNSRSR-----LSPKRKRSEESTKNKLNDLDLRLTPTFPA
        VLRGG+LRP+ E L      AG P+P S+E SE    CT+M  L       R+ Y +SRFS+SRSR      SP +++   S     ++LDL L P FP 
Subjt:  VLRGGTLRPMNEFLA-----AGSPNPASDETSEAEVACTDMWKL-------RDSYPNSRFSNSRSR-----LSPKRKRSEESTKNKLNDLDLRLTPTFPA

Query:  K------STRRAATPSMNSEESETTT
        K      + RR+ TPSMNSE+S TTT
Subjt:  K------STRRAATPSMNSEESETTT

Sequences

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CDS sequence

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ATGAGCTGCAACGGTTGCCGCGTTCTCCGAAAGGGCTGCAGTGAGTCCTGTATTCTCCGCCCTTGCTTGCAGTGGATTGACACCTCTGAAGCCCAAGGCCACGCTACTGT
CTTTGTCGCTAAGTTCTTCGGCCGCGCCGGTCTTATGTCTTTCATCTCCGCCGTCCCTGAATCTCAACGACCTTCTTTGTTTCAGTCTTTGCTGTTTGAAGCCTGTGGTC
GTACTGTCAATCCGGTCAACGGCGCCGTTGGTCTTCTCTGGACTGGAAACTGGCATATCTGTCAGGCGGCGGTGGAGACTGTGTTACGAGGCGGTACGTTGCGGCCGATG
AATGAGTTTCTCGCCGCTGGATCTCCTAATCCGGCTTCCGATGAAACGTCCGAGGCTGAAGTCGCCTGTACCGACATGTGGAAGCTTCGAGATTCTTATCCAAATTCTCG
ATTCTCCAACTCCCGATCCAGACTCTCCCCAAAACGTAAACGATCCGAGGAATCCACTAAAAACAAACTGAACGACTTAGATCTCCGTTTAACACCGACTTTTCCGGCCA
AATCAACCCGGCGTGCCGCTACTCCGTCAATGAATTCCGAGGAATCCGAAACCACTACGTGTTTTGAAAGCGGCGGCTTAATTGATCATCATCATCGCCACTACCATCCA
GAAGAACTGGTACCGGAACGGAAACTTCTCAATTTATTCGTCTAA

mRNA sequence

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CCCTCATTTCCATGCGAACCACCATCTCCATTGCACCATCTTCCTCCCAAACATGAGCTGCAACGGTTGCCGCGTTCTCCGAAAGGGCTGCAGTGAGTCCTGTATTCTCC
GCCCTTGCTTGCAGTGGATTGACACCTCTGAAGCCCAAGGCCACGCTACTGTCTTTGTCGCTAAGTTCTTCGGCCGCGCCGGTCTTATGTCTTTCATCTCCGCCGTCCCT
GAATCTCAACGACCTTCTTTGTTTCAGTCTTTGCTGTTTGAAGCCTGTGGTCGTACTGTCAATCCGGTCAACGGCGCCGTTGGTCTTCTCTGGACTGGAAACTGGCATAT
CTGTCAGGCGGCGGTGGAGACTGTGTTACGAGGCGGTACGTTGCGGCCGATGAATGAGTTTCTCGCCGCTGGATCTCCTAATCCGGCTTCCGATGAAACGTCCGAGGCTG
AAGTCGCCTGTACCGACATGTGGAAGCTTCGAGATTCTTATCCAAATTCTCGATTCTCCAACTCCCGATCCAGACTCTCCCCAAAACGTAAACGATCCGAGGAATCCACT
AAAAACAAACTGAACGACTTAGATCTCCGTTTAACACCGACTTTTCCGGCCAAATCAACCCGGCGTGCCGCTACTCCGTCAATGAATTCCGAGGAATCCGAAACCACTAC
GTGTTTTGAAAGCGGCGGCTTAATTGATCATCATCATCGCCACTACCATCCAGAAGAACTGGTACCGGAACGGAAACTTCTCAATTTATTCGTCTAAAAACCAGATTATT
CCGAACGCACGCATGGCTTATATGATTCTGTGAATCAGACGTTCACAGCTGCTATGGTTTAGGCGAATTTTGAAATTCTTTTCCGGGTTAAAAAAAAGTAACCCGGAAGT
GAAGTGTCCTGGATTGTGTCGGAAAATTGAAGATTCCGGCGAGTTTTGTTTTGTTTATGTCGTTTTTGTTCTAAAATTGTAATATCCAGCAACAACCCACCGGCACAGGA
TTTCACTCCTCGGCCGCCAGAGGAGTGAGAAATGAGCGTTTGTCGGTGGACCCTTTTTCTTGCCTTGTGTTTCCATTTTGT

Protein sequence

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MSCNGCRVLRKGCSESCILRPCLQWIDTSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHICQAAVETVLRGGTLRPM
NEFLAAGSPNPASDETSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESTKNKLNDLDLRLTPTFPAKSTRRAATPSMNSEESETTTCFESGGLIDHHHRHYHP
EELVPERKLLNLFV

Carg18558 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome