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Carg18567 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18567
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionLate embryogenesis abundant protein
Genome locationCarg_Chr07:2995743..2996009
RNA-Seq ExpressionCarg18567
SyntenyCarg18567
Gene Ontology termsNA
InterPro domainsIPR018930 - Late embryogenesis abundant protein, LEA-18


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594997.1 hypothetical protein SDJN03_11550, partial [Cucurbita argyrosperma subsp. sororia]1.5e-3797.73Show/hide
Query:  MDKREADQPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLEPKPSRGGGGGSTDAPTLSGDAVSSVINRQGVP
        MDKREADQ KRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLEPKPSR GGGGSTDAPTLSGDAVSSVINRQGVP
Subjt:  MDKREADQPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLEPKPSRGGGGGSTDAPTLSGDAVSSVINRQGVP

XP_022962656.1 uncharacterized protein LOC111463078 [Cucurbita moschata]8.5e-3897.73Show/hide
Query:  MDKREADQPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLEPKPSRGGGGGSTDAPTLSGDAVSSVINRQGVP
        MDKREADQPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLE KPSR GGGGSTDAPTLSGDAVSSVINRQGVP
Subjt:  MDKREADQPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLEPKPSRGGGGGSTDAPTLSGDAVSSVINRQGVP

XP_023003117.1 uncharacterized protein LOC111496824 [Cucurbita maxima]1.6e-3695.51Show/hide
Query:  MDKREADQPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLEPKPSR-GGGGGSTDAPTLSGDAVSSVINRQGVP
        MDKREADQPKRQQPERKS S+EERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLEPKPSR GGGGGSTDAPTLSGDA+SSVINRQGVP
Subjt:  MDKREADQPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLEPKPSR-GGGGGSTDAPTLSGDAVSSVINRQGVP

XP_023518886.1 uncharacterized protein LOC111782271 [Cucurbita pepo subsp. pepo]1.2e-39100Show/hide
Query:  MDKREADQPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLEPKPSRGGGGGSTDAPTLSGDAVSSVINRQGVP
        MDKREADQPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLEPKPSRGGGGGSTDAPTLSGDAVSSVINRQGVP
Subjt:  MDKREADQPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLEPKPSRGGGGGSTDAPTLSGDAVSSVINRQGVP

XP_038883215.1 uncharacterized protein LOC120074234 [Benincasa hispida]8.6e-3083.15Show/hide
Query:  MDKREADQPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLEPKPSRGGGGGSTDAPTLSGD-AVSSVINRQGVP
        MDKRE DQ +RQQ ERKSG EEER EGIPLE+SPYVNYKDLEDYK+QAYG QGHL+PKP RG GGG TDAPTLSGD A SSVINRQGVP
Subjt:  MDKREADQPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLEPKPSRGGGGGSTDAPTLSGD-AVSSVINRQGVP

TrEMBL top hitse value%identityAlignment
A0A0A0KGG1 Uncharacterized protein5.4e-2274.07Show/hide
Query:  MDKREADQPKRQQPE-RKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLEPKPSRGGGGGSTDAPTLSGDAVSS
        M+KREADQ + Q  E RKS  E+ER E IPLE+SPYVNY+DLEDYKNQAYG QGHL+PKP RGGGGG TDAPTLSGDA ++
Subjt:  MDKREADQPKRQQPE-RKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLEPKPSRGGGGGSTDAPTLSGDAVSS

A0A1S4DTA9 uncharacterized protein LOC1079904494.7e-2676.67Show/hide
Query:  MDKREADQPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLEPKPSRGGGGGS-TDAPTLSGD-AVSSVINRQGVP
        M+KREADQ + Q  ERKS  E+ER EG+PLE+SPYVNYKDLEDYK+QAYG QGHL+PKP RGGGGG  TDAPTLSGD A SSV NRQGVP
Subjt:  MDKREADQPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLEPKPSRGGGGGS-TDAPTLSGD-AVSSVINRQGVP

A0A5D3CLL7 Late embryogenesis abundant protein, LEA-186.8e-2574.44Show/hide
Query:  MDKREADQPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLEPKPSRGGGGGS-TDAPTLSGD-AVSSVINRQGVP
        M+KR+ADQ + Q  E KS  E+ER EG+PLE+SPYVNYKDLEDYK+QAYG QGHL+PKP RGGGGG  TDAPTLSGD A SSV NRQGVP
Subjt:  MDKREADQPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLEPKPSRGGGGGS-TDAPTLSGD-AVSSVINRQGVP

A0A6J1HDU8 uncharacterized protein LOC1114630784.1e-3897.73Show/hide
Query:  MDKREADQPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLEPKPSRGGGGGSTDAPTLSGDAVSSVINRQGVP
        MDKREADQPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLE KPSR GGGGSTDAPTLSGDAVSSVINRQGVP
Subjt:  MDKREADQPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLEPKPSRGGGGGSTDAPTLSGDAVSSVINRQGVP

A0A6J1KLI9 uncharacterized protein LOC1114968247.8e-3795.51Show/hide
Query:  MDKREADQPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLEPKPSR-GGGGGSTDAPTLSGDAVSSVINRQGVP
        MDKREADQPKRQQPERKS S+EERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLEPKPSR GGGGGSTDAPTLSGDA+SSVINRQGVP
Subjt:  MDKREADQPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLEPKPSR-GGGGGSTDAPTLSGDAVSSVINRQGVP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G23110.1 Late embryogenesis abundant protein, group 63.0e-0939.78Show/hide
Query:  QPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLEPKPSRGGGGGSTDAPTLSGD------------AVSSVINRQGVP
        + +++ P  +   +E + + +    +PY++Y +LEDYK + YGAQGH EPK   G GGG+TDAPT SG             + +  INRQGVP
Subjt:  QPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLEPKPSRGGGGGSTDAPTLSGD------------AVSSVINRQGVP

AT2G23110.2 Late embryogenesis abundant protein, group 63.0e-0939.78Show/hide
Query:  QPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLEPKPSRGGGGGSTDAPTLSGD------------AVSSVINRQGVP
        + +++ P  +   +E + + +    +PY++Y +LEDYK + YGAQGH EPK   G GGG+TDAPT SG             + +  INRQGVP
Subjt:  QPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLEPKPSRGGGGGSTDAPTLSGD------------AVSSVINRQGVP

AT2G23120.1 Late embryogenesis abundant protein, group 61.2e-0849.28Show/hide
Query:  SEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLEPKPSRGGGGGSTDAPTLSGDAVSSVINRQGVP
        +E+ +   +P + SPY+    LEDYK +AYGA+GH EP P  G GGGSTDAPT SGDA ++       P
Subjt:  SEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLEPKPSRGGGGGSTDAPTLSGDAVSSVINRQGVP

AT2G33690.1 Late embryogenesis abundant protein, group 69.2e-1457.81Show/hide
Query:  SEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLEPKPSRGGGGGSTDAPTLSGDAVSSVIN
        S+ E  + +PLETSPY  Y+D+EDYK  AYG  GH + KP  G GGG+TDAPT SGDA  S I+
Subjt:  SEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLEPKPSRGGGGGSTDAPTLSGDAVSSVIN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAAGCGCGAGGCCGATCAGCCGAAGCGGCAACAACCGGAAAGGAAGAGCGGAAGTGAAGAGGAGAGATTGGAGGGGATTCCGTTGGAGACCAGTCCGTACGTGAA
TTACAAGGACTTGGAAGATTACAAAAACCAAGCCTACGGAGCCCAAGGCCATCTCGAGCCCAAACCCAGCCGCGGCGGCGGCGGTGGATCCACCGACGCTCCCACTCTCT
CCGGCGACGCCGTTTCGTCGGTGATCAACCGCCAAGGAGTGCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATAAGCGCGAGGCCGATCAGCCGAAGCGGCAACAACCGGAAAGGAAGAGCGGAAGTGAAGAGGAGAGATTGGAGGGGATTCCGTTGGAGACCAGTCCGTACGTGAA
TTACAAGGACTTGGAAGATTACAAAAACCAAGCCTACGGAGCCCAAGGCCATCTCGAGCCCAAACCCAGCCGCGGCGGCGGCGGTGGATCCACCGACGCTCCCACTCTCT
CCGGCGACGCCGTTTCGTCGGTGATCAACCGCCAAGGAGTGCCCTGA
Protein sequenceShow/hide protein sequence
MDKREADQPKRQQPERKSGSEEERLEGIPLETSPYVNYKDLEDYKNQAYGAQGHLEPKPSRGGGGGSTDAPTLSGDAVSSVINRQGVP