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Carg18568 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18568
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr07:2998856..3000602
RNA-Seq ExpressionCarg18568
SyntenyCarg18568
Gene Ontology termsNA
InterPro domainsIPR027854 - Short transmembrane mitochondrial protein 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594998.1 hypothetical protein SDJN03_11551, partial [Cucurbita argyrosperma subsp. sororia]5.6e-5093.81Show/hide
Query:  MIGASIVDLYRAGNGKREETETLGNGVEDISIEERCSLAANVRAFHTCGSGERETPMGFVRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIE
        MIGASIVDLYRAGNGKREETETLGNGVEDISIEERCSLAANVR      SGERETPMGF+RSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIE
Subjt:  MIGASIVDLYRAGNGKREETETLGNGVEDISIEERCSLAANVRAFHTCGSGERETPMGFVRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIE

Query:  ENYRKPKKREDDD
        ENYRKPKKREDDD
Subjt:  ENYRKPKKREDDD

KAG7026954.1 hypothetical protein SDJN02_10962, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-56100Show/hide
Query:  MIGASIVDLYRAGNGKREETETLGNGVEDISIEERCSLAANVRAFHTCGSGERETPMGFVRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIE
        MIGASIVDLYRAGNGKREETETLGNGVEDISIEERCSLAANVRAFHTCGSGERETPMGFVRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIE
Subjt:  MIGASIVDLYRAGNGKREETETLGNGVEDISIEERCSLAANVRAFHTCGSGERETPMGFVRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIE

Query:  ENYRKPKKREDDD
        ENYRKPKKREDDD
Subjt:  ENYRKPKKREDDD

KAG7034311.1 hypothetical protein SDJN02_04038, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-2080.65Show/hide
Query:  ERETPMGFVRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKKREDDD
        +R TPMG +RS FS I GTV GIY+AQNY+VPNIRKLANTG++MAKHIEENYRKPKKREDDD
Subjt:  ERETPMGFVRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKKREDDD

XP_022963418.1 uncharacterized protein LOC111463630 [Cucurbita moschata]2.9e-2298.25Show/hide
Query:  MGFVRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKKREDDD
        MGF+RSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKKREDDD
Subjt:  MGFVRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKKREDDD

XP_023518887.1 uncharacterized protein LOC111782272 [Cucurbita pepo subsp. pepo]8.4e-2296.49Show/hide
Query:  MGFVRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKKREDDD
        MGF+RSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMA+HIEENYRKPKKREDDD
Subjt:  MGFVRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKKREDDD

TrEMBL top hitse value%identityAlignment
A0A1S3B1N0 uncharacterized protein LOC1034848243.8e-2087.72Show/hide
Query:  MGFVRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKKREDDD
        MGF+RSSFSFI G+VFGIYVAQNY+VPNIRKLANTG+ MAKHIEENYRKPKKR+DDD
Subjt:  MGFVRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKKREDDD

A0A5D3CR66 Uncharacterized protein3.8e-2087.72Show/hide
Query:  MGFVRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKKREDDD
        MGF+RSSFSFI G+VFGIYVAQNY+VPNIRKLANTG+ MAKHIEENYRKPKKR+DDD
Subjt:  MGFVRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKKREDDD

A0A6J1BSM8 uncharacterized protein LOC1110053451.1e-1985.96Show/hide
Query:  MGFVRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKKREDDD
        MGF+RSSFSFI GTV GIYVAQNY+VPNIRKLANTG+++AKHIEENYRKPKKR+DDD
Subjt:  MGFVRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKKREDDD

A0A6J1HHR2 uncharacterized protein LOC1114636301.4e-2298.25Show/hide
Query:  MGFVRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKKREDDD
        MGF+RSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKKREDDD
Subjt:  MGFVRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKKREDDD

A0A6J1KVJ8 uncharacterized protein LOC1114968251.4e-2298.25Show/hide
Query:  MGFVRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKKREDDD
        MGF+RSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKKREDDD
Subjt:  MGFVRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKKREDDD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G35736.1 unknown protein2.7e-1875Show/hide
Query:  MGFVRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKK
        MG  RS FSFI G+VFG+Y+AQNY+VPNIRKL NTG+++AKH+EENYRKPKK
Subjt:  MGFVRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKK

AT2G35736.2 unknown protein2.7e-1875Show/hide
Query:  MGFVRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKK
        MG  RS FSFI G+VFG+Y+AQNY+VPNIRKL NTG+++AKH+EENYRKPKK
Subjt:  MGFVRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKK

AT4G25225.1 unknown protein1.3e-1565.45Show/hide
Query:  MGFVRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKKRED
        MG +RSSFSFI+GTV GIY+AQ Y+VPNI+KL +  + MAK +EE YRKPK R+D
Subjt:  MGFVRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKKRED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGGAGCGTCCATAGTCGACCTGTATCGAGCTGGAAACGGGAAGCGCGAAGAAACTGAGACTCTCGGAAACGGCGTGGAGGATATATCCATTGAAGAACGGTGTTC
ACTTGCCGCTAATGTACGTGCGTTTCACACGTGTGGCTCCGGCGAAAGAGAGACGCCGATGGGCTTTGTCAGAAGTAGCTTCTCCTTTATAGTGGGAACGGTATTTGGCA
TTTACGTGGCTCAAAATTACAGTGTTCCCAACATCAGGAAGCTCGCCAATACTGGGATTCTGATGGCCAAACACATCGAAGAGAACTACAGGAAGCCAAAGAAGCGGGAG
GACGATGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCGGAGCGTCCATAGTCGACCTGTATCGAGCTGGAAACGGGAAGCGCGAAGAAACTGAGACTCTCGGAAACGGCGTGGAGGATATATCCATTGAAGAACGGTGTTC
ACTTGCCGCTAATGTACGTGCGTTTCACACGTGTGGCTCCGGCGAAAGAGAGACGCCGATGGGCTTTGTCAGAAGTAGCTTCTCCTTTATAGTGGGAACGGTATTTGGCA
TTTACGTGGCTCAAAATTACAGTGTTCCCAACATCAGGAAGCTCGCCAATACTGGGATTCTGATGGCCAAACACATCGAAGAGAACTACAGGAAGCCAAAGAAGCGGGAG
GACGATGATTGA
Protein sequenceShow/hide protein sequence
MIGASIVDLYRAGNGKREETETLGNGVEDISIEERCSLAANVRAFHTCGSGERETPMGFVRSSFSFIVGTVFGIYVAQNYSVPNIRKLANTGILMAKHIEENYRKPKKRE
DDD