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Carg18591 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18591
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein phosphatase 1 regulatory subunit pprA
Genome locationCarg_Chr12:11729514..11730113
RNA-Seq ExpressionCarg18591
SyntenyCarg18591
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7021300.1 hypothetical protein SDJN02_17988, partial [Cucurbita argyrosperma subsp. argyrosperma]9.6e-39100Show/hide
Query:  MANICYALTLFLDLTFQYCVASEGHYLSQNGVSELEGISTLSRRFMLKDSQIEPLESIAEDVAGSREEPTTIYLKNNQCNKTLY
        MANICYALTLFLDLTFQYCVASEGHYLSQNGVSELEGISTLSRRFMLKDSQIEPLESIAEDVAGSREEPTTIYLKNNQCNKTLY
Subjt:  MANICYALTLFLDLTFQYCVASEGHYLSQNGVSELEGISTLSRRFMLKDSQIEPLESIAEDVAGSREEPTTIYLKNNQCNKTLY

XP_004139355.1 protein phosphatase 1 regulatory inhibitor subunit PPP1R7 homolog [Cucumis sativus]2.1e-0947.25Show/hide
Query:  FQYCVASEGHYLSQNGVSELEGISTL------------------------SRRFMLKDSQIEPLESIAEDVAGSREEPTTIYLKNNQCNKT
        F+ CVA E  YLS NG+S++EG+STL                             L D+QIE LE+IAEDVAGSRE+ TTIYL+NN C KT
Subjt:  FQYCVASEGHYLSQNGVSELEGISTL------------------------SRRFMLKDSQIEPLESIAEDVAGSREEPTTIYLKNNQCNKT

XP_022946403.1 protein phosphatase 1 regulatory inhibitor subunit PPP1R7 homolog [Cucurbita moschata]2.1e-0947.25Show/hide
Query:  FQYCVASEGHYLSQNGVSELEGISTL------------------------SRRFMLKDSQIEPLESIAEDVAGSREEPTTIYLKNNQCNKT
        F+ C+A E  YLS NG+S++EGISTL                             L D+QIE LESI+EDVAGSRE+ TTIYL+NN C KT
Subjt:  FQYCVASEGHYLSQNGVSELEGISTL------------------------SRRFMLKDSQIEPLESIAEDVAGSREEPTTIYLKNNQCNKT

XP_023547162.1 protein phosphatase 1 regulatory inhibitor subunit PPP1R7 homolog [Cucurbita pepo subsp. pepo]2.1e-0947.25Show/hide
Query:  FQYCVASEGHYLSQNGVSELEGISTL------------------------SRRFMLKDSQIEPLESIAEDVAGSREEPTTIYLKNNQCNKT
        F+ C+A E  YLS NG+S++EGISTL                             L D+QIE LESI+EDVAGSRE+ TTIYL+NN C KT
Subjt:  FQYCVASEGHYLSQNGVSELEGISTL------------------------SRRFMLKDSQIEPLESIAEDVAGSREEPTTIYLKNNQCNKT

XP_038877428.1 protein phosphatase 1 regulatory inhibitor subunit PPP1R7 homolog [Benincasa hispida]2.5e-1050.55Show/hide
Query:  FQYCVASEGHYLSQNGVSELEGISTL---------SRRFM---------------LKDSQIEPLESIAEDVAGSREEPTTIYLKNNQCNKT
        FQ CVA E  YLS NG+S++EG+STL         S + M               L D+QIE LE+IAEDVAGSRE+ TTIYL+NN C KT
Subjt:  FQYCVASEGHYLSQNGVSELEGISTL---------SRRFM---------------LKDSQIEPLESIAEDVAGSREEPTTIYLKNNQCNKT

TrEMBL top hitse value%identityAlignment
A0A0A0LEZ4 Uncharacterized protein1.0e-0947.25Show/hide
Query:  FQYCVASEGHYLSQNGVSELEGISTL------------------------SRRFMLKDSQIEPLESIAEDVAGSREEPTTIYLKNNQCNKT
        F+ CVA E  YLS NG+S++EG+STL                             L D+QIE LE+IAEDVAGSRE+ TTIYL+NN C KT
Subjt:  FQYCVASEGHYLSQNGVSELEGISTL------------------------SRRFMLKDSQIEPLESIAEDVAGSREEPTTIYLKNNQCNKT

A0A1S3C7Y5 protein phosphatase 1 regulatory subunit pprA1.0e-0947.25Show/hide
Query:  FQYCVASEGHYLSQNGVSELEGISTL------------------------SRRFMLKDSQIEPLESIAEDVAGSREEPTTIYLKNNQCNKT
        F+ CVA E  YLS NG+S++EG+STL                             L D+QIE LE+IAEDVAGSRE+ TTIYL+NN C KT
Subjt:  FQYCVASEGHYLSQNGVSELEGISTL------------------------SRRFMLKDSQIEPLESIAEDVAGSREEPTTIYLKNNQCNKT

A0A5D3CKJ2 Protein phosphatase 1 regulatory subunit pprA6.6e-0946.59Show/hide
Query:  FQYCVASEGHYLSQNGVSELEGISTL------------------------SRRFMLKDSQIEPLESIAEDVAGSREEPTTIYLKNNQC
        F+ CVA E  YLS NG+S++EG+STL                             L D+QIE LE+IAEDVAGSRE+ TTIYL+NN C
Subjt:  FQYCVASEGHYLSQNGVSELEGISTL------------------------SRRFMLKDSQIEPLESIAEDVAGSREEPTTIYLKNNQC

A0A6J1G3P9 protein phosphatase 1 regulatory inhibitor subunit PPP1R7 homolog1.0e-0947.25Show/hide
Query:  FQYCVASEGHYLSQNGVSELEGISTL------------------------SRRFMLKDSQIEPLESIAEDVAGSREEPTTIYLKNNQCNKT
        F+ C+A E  YLS NG+S++EGISTL                             L D+QIE LESI+EDVAGSRE+ TTIYL+NN C KT
Subjt:  FQYCVASEGHYLSQNGVSELEGISTL------------------------SRRFMLKDSQIEPLESIAEDVAGSREEPTTIYLKNNQCNKT

A0A6J1KFL4 protein phosphatase 1 regulatory inhibitor subunit PPP1R7 homolog1.0e-0947.25Show/hide
Query:  FQYCVASEGHYLSQNGVSELEGISTL------------------------SRRFMLKDSQIEPLESIAEDVAGSREEPTTIYLKNNQCNKT
        F+ C+A E  YLS NG+S++EGISTL                             L D+QIE LESI+EDVAGSRE+ TTIYL+NN C KT
Subjt:  FQYCVASEGHYLSQNGVSELEGISTL------------------------SRRFMLKDSQIEPLESIAEDVAGSREEPTTIYLKNNQCNKT

SwissProt top hitse value%identityAlignment
Q84WJ9 Protein phosphatase 1 regulatory inhibitor subunit PPP1R7 homolog4.8e-0940.66Show/hide
Query:  FQYCVASEGHYLSQNGVSELEGISTL------------------------SRRFMLKDSQIEPLESIAEDVAGSREEPTTIYLKNNQCNKT
        F+ CVA E  YLS NG+S++EG+S L                             L D+QIE LE+I E V GS+E+ TTIYL+NN C K+
Subjt:  FQYCVASEGHYLSQNGVSELEGISTL------------------------SRRFMLKDSQIEPLESIAEDVAGSREEPTTIYLKNNQCNKT

Arabidopsis top hitse value%identityAlignment
AT5G19680.1 Leucine-rich repeat (LRR) family protein3.4e-1040.66Show/hide
Query:  FQYCVASEGHYLSQNGVSELEGISTL------------------------SRRFMLKDSQIEPLESIAEDVAGSREEPTTIYLKNNQCNKT
        F+ CVA E  YLS NG+S++EG+S L                             L D+QIE LE+I E V GS+E+ TTIYL+NN C K+
Subjt:  FQYCVASEGHYLSQNGVSELEGISTL------------------------SRRFMLKDSQIEPLESIAEDVAGSREEPTTIYLKNNQCNKT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAATATTTGTTATGCCTTAACTCTGTTCCTTGACCTAACTTTTCAGTATTGTGTTGCTTCGGAAGGGCACTATCTAAGCCAAAATGGAGTTTCAGAACTTGAAGG
CATCTCAACCTTGTCTAGAAGATTTATGCTTAAAGACAGCCAAATAGAACCACTTGAAAGCATTGCTGAGGATGTAGCTGGTTCAAGAGAGGAACCGACAACCATCTACC
TCAAGAACAATCAATGTAATAAAACTCTTTACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAATATTTGTTATGCCTTAACTCTGTTCCTTGACCTAACTTTTCAGTATTGTGTTGCTTCGGAAGGGCACTATCTAAGCCAAAATGGAGTTTCAGAACTTGAAGG
CATCTCAACCTTGTCTAGAAGATTTATGCTTAAAGACAGCCAAATAGAACCACTTGAAAGCATTGCTGAGGATGTAGCTGGTTCAAGAGAGGAACCGACAACCATCTACC
TCAAGAACAATCAATGTAATAAAACTCTTTACTAA
Protein sequenceShow/hide protein sequence
MANICYALTLFLDLTFQYCVASEGHYLSQNGVSELEGISTLSRRFMLKDSQIEPLESIAEDVAGSREEPTTIYLKNNQCNKTLY