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Carg18592 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18592
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein phosphatase 1 regulatory subunit pprA
Genome locationCarg_Chr12:11730128..11730751
RNA-Seq ExpressionCarg18592
SyntenyCarg18592
Gene Ontology termsNA
InterPro domainsIPR032675 - Leucine-rich repeat domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061534.1 protein phosphatase 1 regulatory subunit pprA [Cucumis melo var. makuwa]6.1e-2359.46Show/hide
Query:  TFSNSLKEFYVSMNEVAEMEELGHFQQLRILELGSTRPQCSLCAVKRQGKWPNKKATFSPEEAMENIQNLTNLQELWLGRNWKKAVNLCGLKHLEKIILQ
        T SN+LKE YVS NEV++MEEL HF QL+ILELGS R +                        MEN++NLTNLQELWLGRN  KAVNLCGLK L+KI LQ
Subjt:  TFSNSLKEFYVSMNEVAEMEELGHFQQLRILELGSTRPQCSLCAVKRQGKWPNKKATFSPEEAMENIQNLTNLQELWLGRNWKKAVNLCGLKHLEKIILQ

Query:  SNRMTSVTGFE
        SNR+TS+TGFE
Subjt:  SNRMTSVTGFE

KAG7021301.1 Protein phosphatase 1 regulatory subunit 7, partial [Cucurbita argyrosperma subsp. argyrosperma]5.7e-61100Show/hide
Query:  MKSLRYMTFSNSLKEFYVSMNEVAEMEELGHFQQLRILELGSTRPQCSLCAVKRQGKWPNKKATFSPEEAMENIQNLTNLQELWLGRNWKKAVNLCGLKH
        MKSLRYMTFSNSLKEFYVSMNEVAEMEELGHFQQLRILELGSTRPQCSLCAVKRQGKWPNKKATFSPEEAMENIQNLTNLQELWLGRNWKKAVNLCGLKH
Subjt:  MKSLRYMTFSNSLKEFYVSMNEVAEMEELGHFQQLRILELGSTRPQCSLCAVKRQGKWPNKKATFSPEEAMENIQNLTNLQELWLGRNWKKAVNLCGLKH

Query:  LEKIILQSNRMTSVTGFEA
        LEKIILQSNRMTSVTGFEA
Subjt:  LEKIILQSNRMTSVTGFEA

TYK10739.1 protein phosphatase 1 regulatory subunit pprA [Cucumis melo var. makuwa]6.1e-2359.46Show/hide
Query:  TFSNSLKEFYVSMNEVAEMEELGHFQQLRILELGSTRPQCSLCAVKRQGKWPNKKATFSPEEAMENIQNLTNLQELWLGRNWKKAVNLCGLKHLEKIILQ
        T SN+LKE YVS NEV++MEEL HF QL+ILELGS R +                        MEN++NLTNLQELWLGRN  KAVNLCGLK L+KI LQ
Subjt:  TFSNSLKEFYVSMNEVAEMEELGHFQQLRILELGSTRPQCSLCAVKRQGKWPNKKATFSPEEAMENIQNLTNLQELWLGRNWKKAVNLCGLKHLEKIILQ

Query:  SNRMTSVTGFE
        SNR+TS+TGFE
Subjt:  SNRMTSVTGFE

XP_008458673.1 PREDICTED: protein phosphatase 1 regulatory subunit pprA [Cucumis melo]6.1e-2359.46Show/hide
Query:  TFSNSLKEFYVSMNEVAEMEELGHFQQLRILELGSTRPQCSLCAVKRQGKWPNKKATFSPEEAMENIQNLTNLQELWLGRNWKKAVNLCGLKHLEKIILQ
        T SN+LKE YVS NEV++MEEL HF QL+ILELGS R +                        MEN++NLTNLQELWLGRN  KAVNLCGLK L+KI LQ
Subjt:  TFSNSLKEFYVSMNEVAEMEELGHFQQLRILELGSTRPQCSLCAVKRQGKWPNKKATFSPEEAMENIQNLTNLQELWLGRNWKKAVNLCGLKHLEKIILQ

Query:  SNRMTSVTGFE
        SNR+TS+TGFE
Subjt:  SNRMTSVTGFE

XP_022154721.1 protein phosphatase 1 regulatory subunit pprA [Momordica charantia]7.3e-2462.39Show/hide
Query:  SNSLKEFYVSMNEVAEMEELGHFQQLRILELGSTRPQCSLCAVKRQGKWPNKKATFSPEEAMENIQNLTNLQELWLGRNWKKAVNLCGLKHLEKIILQSN
        SNSLKE YVS NEVA +EEL HFQQLRILELGS R +                        MEN++NLTNLQELWLGRN  KAVNLCGLK L+KI LQSN
Subjt:  SNSLKEFYVSMNEVAEMEELGHFQQLRILELGSTRPQCSLCAVKRQGKWPNKKATFSPEEAMENIQNLTNLQELWLGRNWKKAVNLCGLKHLEKIILQSN

Query:  RMTSVTGFE
        R+TS+TGFE
Subjt:  RMTSVTGFE

TrEMBL top hitse value%identityAlignment
A0A0A0LEZ4 Uncharacterized protein1.1e-2259.63Show/hide
Query:  SNSLKEFYVSMNEVAEMEELGHFQQLRILELGSTRPQCSLCAVKRQGKWPNKKATFSPEEAMENIQNLTNLQELWLGRNWKKAVNLCGLKHLEKIILQSN
        SN+LKE YVS NEV +MEEL HF QL+ILELGS R +                        MEN++NLTNLQELWLGRN  KAVNLCGLK L+KI LQSN
Subjt:  SNSLKEFYVSMNEVAEMEELGHFQQLRILELGSTRPQCSLCAVKRQGKWPNKKATFSPEEAMENIQNLTNLQELWLGRNWKKAVNLCGLKHLEKIILQSN

Query:  RMTSVTGFE
        R+TS+TGFE
Subjt:  RMTSVTGFE

A0A1S3C7Y5 protein phosphatase 1 regulatory subunit pprA3.0e-2359.46Show/hide
Query:  TFSNSLKEFYVSMNEVAEMEELGHFQQLRILELGSTRPQCSLCAVKRQGKWPNKKATFSPEEAMENIQNLTNLQELWLGRNWKKAVNLCGLKHLEKIILQ
        T SN+LKE YVS NEV++MEEL HF QL+ILELGS R +                        MEN++NLTNLQELWLGRN  KAVNLCGLK L+KI LQ
Subjt:  TFSNSLKEFYVSMNEVAEMEELGHFQQLRILELGSTRPQCSLCAVKRQGKWPNKKATFSPEEAMENIQNLTNLQELWLGRNWKKAVNLCGLKHLEKIILQ

Query:  SNRMTSVTGFE
        SNR+TS+TGFE
Subjt:  SNRMTSVTGFE

A0A5A7V2Q2 Protein phosphatase 1 regulatory subunit pprA3.0e-2359.46Show/hide
Query:  TFSNSLKEFYVSMNEVAEMEELGHFQQLRILELGSTRPQCSLCAVKRQGKWPNKKATFSPEEAMENIQNLTNLQELWLGRNWKKAVNLCGLKHLEKIILQ
        T SN+LKE YVS NEV++MEEL HF QL+ILELGS R +                        MEN++NLTNLQELWLGRN  KAVNLCGLK L+KI LQ
Subjt:  TFSNSLKEFYVSMNEVAEMEELGHFQQLRILELGSTRPQCSLCAVKRQGKWPNKKATFSPEEAMENIQNLTNLQELWLGRNWKKAVNLCGLKHLEKIILQ

Query:  SNRMTSVTGFE
        SNR+TS+TGFE
Subjt:  SNRMTSVTGFE

A0A5D3CKJ2 Protein phosphatase 1 regulatory subunit pprA3.0e-2359.46Show/hide
Query:  TFSNSLKEFYVSMNEVAEMEELGHFQQLRILELGSTRPQCSLCAVKRQGKWPNKKATFSPEEAMENIQNLTNLQELWLGRNWKKAVNLCGLKHLEKIILQ
        T SN+LKE YVS NEV++MEEL HF QL+ILELGS R +                        MEN++NLTNLQELWLGRN  KAVNLCGLK L+KI LQ
Subjt:  TFSNSLKEFYVSMNEVAEMEELGHFQQLRILELGSTRPQCSLCAVKRQGKWPNKKATFSPEEAMENIQNLTNLQELWLGRNWKKAVNLCGLKHLEKIILQ

Query:  SNRMTSVTGFE
        SNR+TS+TGFE
Subjt:  SNRMTSVTGFE

A0A6J1DN03 protein phosphatase 1 regulatory subunit pprA3.5e-2462.39Show/hide
Query:  SNSLKEFYVSMNEVAEMEELGHFQQLRILELGSTRPQCSLCAVKRQGKWPNKKATFSPEEAMENIQNLTNLQELWLGRNWKKAVNLCGLKHLEKIILQSN
        SNSLKE YVS NEVA +EEL HFQQLRILELGS R +                        MEN++NLTNLQELWLGRN  KAVNLCGLK L+KI LQSN
Subjt:  SNSLKEFYVSMNEVAEMEELGHFQQLRILELGSTRPQCSLCAVKRQGKWPNKKATFSPEEAMENIQNLTNLQELWLGRNWKKAVNLCGLKHLEKIILQSN

Query:  RMTSVTGFE
        R+TS+TGFE
Subjt:  RMTSVTGFE

SwissProt top hitse value%identityAlignment
Q15435 Protein phosphatase 1 regulatory subunit 71.3e-0733.64Show/hide
Query:  LKEFYVSMNEVAEMEELGHFQQLRILELGSTRPQCSLCAVKRQGKWPNKKATFSPEEAMENIQNLTNLQELWLGRN-WKKAVNLCGLKHLEKIILQSNRM
        LK+ ++  N+++++E L +  QL++LELGS R +                       A+ENI  LTNL+ L+LG+N   K  NL  L +L  + +QSNR+
Subjt:  LKEFYVSMNEVAEMEELGHFQQLRILELGSTRPQCSLCAVKRQGKWPNKKATFSPEEAMENIQNLTNLQELWLGRN-WKKAVNLCGLKHLEKIILQSNRM

Query:  TSVTGFE
        T + G +
Subjt:  TSVTGFE

Q3T0W4 Protein phosphatase 1 regulatory subunit 74.9e-0732.41Show/hide
Query:  LKEFYVSMNEVAEMEELGHFQQLRILELGSTRPQCSLCAVKRQGKWPNKKATFSPEEAMENIQNLTNLQELWLGRN-WKKAVNLCGLKHLEKIILQSNRM
        LK+ ++  N++ ++E +    QL++LELGS R +                       A+ENI  LTNL+ L+LG+N   K  NL  L +L  + +QSNR+
Subjt:  LKEFYVSMNEVAEMEELGHFQQLRILELGSTRPQCSLCAVKRQGKWPNKKATFSPEEAMENIQNLTNLQELWLGRN-WKKAVNLCGLKHLEKIILQSNRM

Query:  TSVTGFEA
        T + G ++
Subjt:  TSVTGFEA

Q5HZV9 Protein phosphatase 1 regulatory subunit 72.2e-0733.64Show/hide
Query:  LKEFYVSMNEVAEMEELGHFQQLRILELGSTRPQCSLCAVKRQGKWPNKKATFSPEEAMENIQNLTNLQELWLGRN-WKKAVNLCGLKHLEKIILQSNRM
        LK+ ++  N++ ++E +   QQL++LELGS R +                       A+ENI  LTNL+ L+LG+N   K  NL  L +L  + +QSNR+
Subjt:  LKEFYVSMNEVAEMEELGHFQQLRILELGSTRPQCSLCAVKRQGKWPNKKATFSPEEAMENIQNLTNLQELWLGRN-WKKAVNLCGLKHLEKIILQSNRM

Query:  TSVTGFE
        T + G +
Subjt:  TSVTGFE

Q5RFS7 Protein phosphatase 1 regulatory subunit 71.3e-0733.64Show/hide
Query:  LKEFYVSMNEVAEMEELGHFQQLRILELGSTRPQCSLCAVKRQGKWPNKKATFSPEEAMENIQNLTNLQELWLGRN-WKKAVNLCGLKHLEKIILQSNRM
        LK+ ++  N+++++E L +  QL++LELGS R +                       A+ENI  LTNL+ L+LG+N   K  NL  L +L  + +QSNR+
Subjt:  LKEFYVSMNEVAEMEELGHFQQLRILELGSTRPQCSLCAVKRQGKWPNKKATFSPEEAMENIQNLTNLQELWLGRN-WKKAVNLCGLKHLEKIILQSNRM

Query:  TSVTGFE
        T + G +
Subjt:  TSVTGFE

Q84WJ9 Protein phosphatase 1 regulatory inhibitor subunit PPP1R7 homolog5.6e-1948.62Show/hide
Query:  SNSLKEFYVSMNEVAEMEELGHFQQLRILELGSTRPQCSLCAVKRQGKWPNKKATFSPEEAMENIQNLTNLQELWLGRNWKKAVNLCGLKHLEKIILQSN
        S++LKE YVS NEV ++ E+ H   L+ILELGS R +                        MEN++N T L+ELWLGRN  K VNLCGLK ++KI LQSN
Subjt:  SNSLKEFYVSMNEVAEMEELGHFQQLRILELGSTRPQCSLCAVKRQGKWPNKKATFSPEEAMENIQNLTNLQELWLGRNWKKAVNLCGLKHLEKIILQSN

Query:  RMTSVTGFE
        R+TS+ GFE
Subjt:  RMTSVTGFE

Arabidopsis top hitse value%identityAlignment
AT5G19680.1 Leucine-rich repeat (LRR) family protein4.0e-2048.62Show/hide
Query:  SNSLKEFYVSMNEVAEMEELGHFQQLRILELGSTRPQCSLCAVKRQGKWPNKKATFSPEEAMENIQNLTNLQELWLGRNWKKAVNLCGLKHLEKIILQSN
        S++LKE YVS NEV ++ E+ H   L+ILELGS R +                        MEN++N T L+ELWLGRN  K VNLCGLK ++KI LQSN
Subjt:  SNSLKEFYVSMNEVAEMEELGHFQQLRILELGSTRPQCSLCAVKRQGKWPNKKATFSPEEAMENIQNLTNLQELWLGRNWKKAVNLCGLKHLEKIILQSN

Query:  RMTSVTGFE
        R+TS+ GFE
Subjt:  RMTSVTGFE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCTCTTCGTTACATGACTTTCTCCAATTCACTGAAGGAATTTTATGTATCTATGAATGAAGTTGCTGAAATGGAAGAGCTAGGTCATTTTCAACAGCTGCGGAT
TCTTGAGCTTGGTTCCACTAGACCGCAGTGTTCTTTATGTGCAGTTAAACGGCAAGGCAAATGGCCAAACAAAAAGGCAACGTTCTCTCCCGAAGAAGCAATGGAAAATA
TACAAAACTTGACCAATTTACAAGAGCTGTGGTTAGGGCGTAACTGGAAAAAGGCAGTAAACCTTTGTGGATTAAAACATCTCGAGAAAATTATTTTGCAGAGCAACCGT
ATGACTTCAGTGACAGGATTTGAAGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAATCTCTTCGTTACATGACTTTCTCCAATTCACTGAAGGAATTTTATGTATCTATGAATGAAGTTGCTGAAATGGAAGAGCTAGGTCATTTTCAACAGCTGCGGAT
TCTTGAGCTTGGTTCCACTAGACCGCAGTGTTCTTTATGTGCAGTTAAACGGCAAGGCAAATGGCCAAACAAAAAGGCAACGTTCTCTCCCGAAGAAGCAATGGAAAATA
TACAAAACTTGACCAATTTACAAGAGCTGTGGTTAGGGCGTAACTGGAAAAAGGCAGTAAACCTTTGTGGATTAAAACATCTCGAGAAAATTATTTTGCAGAGCAACCGT
ATGACTTCAGTGACAGGATTTGAAGCATGA
Protein sequenceShow/hide protein sequence
MKSLRYMTFSNSLKEFYVSMNEVAEMEELGHFQQLRILELGSTRPQCSLCAVKRQGKWPNKKATFSPEEAMENIQNLTNLQELWLGRNWKKAVNLCGLKHLEKIILQSNR
MTSVTGFEA