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Carg18615 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18615
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description60S ribosomal protein L31-like
Genome locationCarg_Chr12:11847266..11847763
RNA-Seq ExpressionCarg18615
SyntenyCarg18615
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000054 - Ribosomal protein L31e
IPR020052 - Ribosomal protein L31e, conserved site
IPR023621 - Ribosomal protein L31e domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008459190.1 PREDICTED: 60S ribosomal protein L31 [Cucumis melo]4.3e-5696.67Show/hide
Query:  MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV
        MVEKTKGRKEEVV+REYTINLHKRLHGCTFKKKAPKAIKEIR+FAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV
Subjt:  MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV

Query:  AEISADGLKGLGTKVIEEDD
        AEI A+GLKGLGTKVIEEDD
Subjt:  AEISADGLKGLGTKVIEEDD

XP_022154770.1 60S ribosomal protein L31 [Momordica charantia]3.3e-5696.67Show/hide
Query:  MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV
        MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIR+FAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV
Subjt:  MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV

Query:  AEISADGLKGLGTKVIEEDD
        +EI A+GLKGLGTKVIEEDD
Subjt:  AEISADGLKGLGTKVIEEDD

XP_022938098.1 60S ribosomal protein L31-like [Cucurbita moschata]5.9e-58100Show/hide
Query:  MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV
        MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV
Subjt:  MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV

Query:  AEISADGLKGLGTKVIEEDD
        AEISADGLKGLGTKVIEEDD
Subjt:  AEISADGLKGLGTKVIEEDD

XP_022966016.1 60S ribosomal protein L31-like [Cucurbita maxima]3.8e-5798.33Show/hide
Query:  MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV
        MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV
Subjt:  MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV

Query:  AEISADGLKGLGTKVIEEDD
        AEI ADGLKGLGTKV+EEDD
Subjt:  AEISADGLKGLGTKVIEEDD

XP_023538420.1 60S ribosomal protein L31-like [Cucurbita pepo subsp. pepo]1.3e-5799.17Show/hide
Query:  MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV
        MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV
Subjt:  MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV

Query:  AEISADGLKGLGTKVIEEDD
        +EISADGLKGLGTKVIEEDD
Subjt:  AEISADGLKGLGTKVIEEDD

TrEMBL top hitse value%identityAlignment
A0A5D3CKL3 60S ribosomal protein L312.1e-5696.67Show/hide
Query:  MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV
        MVEKTKGRKEEVV+REYTINLHKRLHGCTFKKKAPKAIKEIR+FAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV
Subjt:  MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV

Query:  AEISADGLKGLGTKVIEEDD
        AEI A+GLKGLGTKVIEEDD
Subjt:  AEISADGLKGLGTKVIEEDD

A0A6J1DKK4 60S ribosomal protein L311.6e-5696.67Show/hide
Query:  MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV
        MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIR+FAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV
Subjt:  MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV

Query:  AEISADGLKGLGTKVIEEDD
        +EI A+GLKGLGTKVIEEDD
Subjt:  AEISADGLKGLGTKVIEEDD

A0A6J1FHW6 60S ribosomal protein L31-like2.9e-58100Show/hide
Query:  MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV
        MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV
Subjt:  MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV

Query:  AEISADGLKGLGTKVIEEDD
        AEISADGLKGLGTKVIEEDD
Subjt:  AEISADGLKGLGTKVIEEDD

A0A6J1HN79 60S ribosomal protein L31-like1.9e-5798.33Show/hide
Query:  MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV
        MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV
Subjt:  MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV

Query:  AEISADGLKGLGTKVIEEDD
        AEI ADGLKGLGTKV+EEDD
Subjt:  AEISADGLKGLGTKVIEEDD

A0A6J1KK05 60S ribosomal protein L312.1e-5696.67Show/hide
Query:  MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV
        MVEKTKGRKEEVV+REYTINLHKRLHGCTFKKKAPKAIKEIR+FAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV
Subjt:  MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV

Query:  AEISADGLKGLGTKVIEEDD
        AEI A+GLKGLGTKVIEEDD
Subjt:  AEISADGLKGLGTKVIEEDD

SwissProt top hitse value%identityAlignment
P46290 60S ribosomal protein L312.4e-5489.17Show/hide
Query:  MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV
        M +KTKGRKEEVVTREYTINLHKRLH CTFKKKAP AIKEIR+FA+KAMGTKDVRVDVKLNK IWSRGIRSVPRR+RVRIARKRNDDEDAKEELYSLVTV
Subjt:  MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV

Query:  AEISADGLKGLGTKVIEEDD
        AEI A GLKGLGTK+IE++D
Subjt:  AEISADGLKGLGTKVIEEDD

P51420 60S ribosomal protein L31-37.3e-5184.03Show/hide
Query:  VEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVA
        + + KGRKEEV+TREYTINLH+RLH CTFKKKAPKAIKEIR+FAEKAMGTKDVRVDVKLNK IWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTVA
Subjt:  VEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVA

Query:  EISADGLKGLGTKVIEEDD
        EI A+GL GLGTKVIEE+D
Subjt:  EISADGLKGLGTKVIEEDD

Q9M573 60S ribosomal protein L318.6e-5288.79Show/hide
Query:  TKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIS
        +K RKEEVV+REYTINLHKRLHGCTFKKKAPKAIKEIR+FA+KAMGT DVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEI 
Subjt:  TKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIS

Query:  ADGLKGLGTKVIEEDD
          GLKGLGT+VI+E++
Subjt:  ADGLKGLGTKVIEEDD

Q9MAV7 60S ribosomal protein L311.9e-5490Show/hide
Query:  MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV
        MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAP AIKEIR+FA+KAMGTKDVRVDVKLNK IWSRGIRSVPRR+RVRIARKRNDDEDAKEELYSLVTV
Subjt:  MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV

Query:  AEISADGLKGLGTKVIEEDD
        A+I A  LKGLG ++IEEDD
Subjt:  AEISADGLKGLGTKVIEEDD

Q9STR1 60S ribosomal protein L31-21.6e-5083.19Show/hide
Query:  VEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVA
        + + KGRKEEVVTREYTINLH+RLH CTFKKKAPKAIKEIR+FAEK MGTKDVRVDVKLNK IWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTVA
Subjt:  VEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVA

Query:  EISADGLKGLGTKVIEEDD
        EI A+GL GLGTK+IEE+D
Subjt:  EISADGLKGLGTKVIEEDD

Arabidopsis top hitse value%identityAlignment
AT2G19740.1 Ribosomal protein L31e family protein2.6e-5184.03Show/hide
Query:  VEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVA
        +EK KGRKEEVVTREYTINLH+RLH CTFKKKAP AIKEIR+FA KAMGTKDVRVDVKLNK IWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTVA
Subjt:  VEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVA

Query:  EISADGLKGLGTKVIEEDD
        EI A+GL GLGTKVIEE++
Subjt:  EISADGLKGLGTKVIEEDD

AT4G26230.1 Ribosomal protein L31e family protein1.2e-5183.19Show/hide
Query:  VEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVA
        + + KGRKEEVVTREYTINLH+RLH CTFKKKAPKAIKEIR+FAEK MGTKDVRVDVKLNK IWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTVA
Subjt:  VEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVA

Query:  EISADGLKGLGTKVIEEDD
        EI A+GL GLGTK+IEE+D
Subjt:  EISADGLKGLGTKVIEEDD

AT5G56710.1 Ribosomal protein L31e family protein5.2e-5284.03Show/hide
Query:  VEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVA
        + + KGRKEEV+TREYTINLH+RLH CTFKKKAPKAIKEIR+FAEKAMGTKDVRVDVKLNK IWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTVA
Subjt:  VEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVA

Query:  EISADGLKGLGTKVIEEDD
        EI A+GL GLGTKVIEE+D
Subjt:  EISADGLKGLGTKVIEEDD

AT5G56710.2 Ribosomal protein L31e family protein1.6e-2959.66Show/hide
Query:  VEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVA
        + + KGRKEEV+TREYTINLH+RLH CTFKKKAPKAIKEIR+FAEKAMGTKDVRVD                                  EE +SLVTVA
Subjt:  VEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVA

Query:  EISADGLKGLGTKVIEEDD
        EI A+GL GLGTKVIEE+D
Subjt:  EISADGLKGLGTKVIEEDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGAGAAGACCAAAGGCAGAAAGGAGGAGGTTGTTACCAGAGAGTACACCATTAACCTTCACAAGCGCCTTCATGGCTGCACCTTTAAGAAGAAGGCCCCAAAGGC
CATCAAGGAGATCAGGAGATTTGCTGAGAAGGCTATGGGAACAAAGGACGTGAGAGTGGATGTGAAGCTGAACAAGCATATCTGGAGCAGGGGAATCAGGAGTGTGCCTA
GAAGAATCAGAGTTCGCATTGCTCGGAAGAGGAACGATGATGAAGATGCCAAGGAGGAGTTGTACTCCCTCGTTACCGTTGCAGAAATCTCTGCTGACGGACTGAAGGGA
CTCGGGACCAAAGTCATTGAGGAAGATGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGAGAAGACCAAAGGCAGAAAGGAGGAGGTTGTTACCAGAGAGTACACCATTAACCTTCACAAGCGCCTTCATGGCTGCACCTTTAAGAAGAAGGCCCCAAAGGC
CATCAAGGAGATCAGGAGATTTGCTGAGAAGGCTATGGGAACAAAGGACGTGAGAGTGGATGTGAAGCTGAACAAGCATATCTGGAGCAGGGGAATCAGGAGTGTGCCTA
GAAGAATCAGAGTTCGCATTGCTCGGAAGAGGAACGATGATGAAGATGCCAAGGAGGAGTTGTACTCCCTCGTTACCGTTGCAGAAATCTCTGCTGACGGACTGAAGGGA
CTCGGGACCAAAGTCATTGAGGAAGATGATTGA
Protein sequenceShow/hide protein sequence
MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEISADGLKG
LGTKVIEEDD