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Carg18618 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18618
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein piccolo isoform X2
Genome locationCarg_Chr12:11852250..11852872
RNA-Seq ExpressionCarg18618
SyntenyCarg18618
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7021326.1 hypothetical protein SDJN02_18015 [Cucurbita argyrosperma subsp. argyrosperma]2.7e-35100Show/hide
Query:  MPGTIRVSVLEFMDLPELLPLPILIKISMGKRQYETSEKGDFSFPLTTLRDDVILIIQDAGGNEVSRAGLFKEFAVEID
        MPGTIRVSVLEFMDLPELLPLPILIKISMGKRQYETSEKGDFSFPLTTLRDDVILIIQDAGGNEVSRAGLFKEFAVEID
Subjt:  MPGTIRVSVLEFMDLPELLPLPILIKISMGKRQYETSEKGDFSFPLTTLRDDVILIIQDAGGNEVSRAGLFKEFAVEID
XP_022937772.1 uncharacterized protein LOC111444070 isoform X2 [Cucurbita moschata]4.5e-3092.21Show/hide
Query:  MPGTIRVSVLEFMDLPELLPLPILIKISMGKRQYETSEKGDFSFPLTTLRDDVILIIQDAGGNEVSRAGLFKEFAVE
        MPGTIRVSVLEFMDLPELLPLPILIKISMGKRQYETSEKGDFSFPLTTLRDDVILIIQDAGGNEVSRAG+  +  VE
Subjt:  MPGTIRVSVLEFMDLPELLPLPILIKISMGKRQYETSEKGDFSFPLTTLRDDVILIIQDAGGNEVSRAGLFKEFAVE
XP_022937773.1 uncharacterized protein LOC111444070 isoform X3 [Cucurbita moschata]4.5e-3092.21Show/hide
Query:  MPGTIRVSVLEFMDLPELLPLPILIKISMGKRQYETSEKGDFSFPLTTLRDDVILIIQDAGGNEVSRAGLFKEFAVE
        MPGTIRVSVLEFMDLPELLPLPILIKISMGKRQYETSEKGDFSFPLTTLRDDVILIIQDAGGNEVSRAG+  +  VE
Subjt:  MPGTIRVSVLEFMDLPELLPLPILIKISMGKRQYETSEKGDFSFPLTTLRDDVILIIQDAGGNEVSRAGLFKEFAVE
XP_022965715.1 uncharacterized protein LOC111465530 isoform X1 [Cucurbita maxima]4.5e-3092.21Show/hide
Query:  MPGTIRVSVLEFMDLPELLPLPILIKISMGKRQYETSEKGDFSFPLTTLRDDVILIIQDAGGNEVSRAGLFKEFAVE
        MPGTIRVSVLEFMDLPELLPLPILIKISMGKRQYETSEKGDFSFPLTTLRDDVILIIQDAGGNEVSRAG+  +  VE
Subjt:  MPGTIRVSVLEFMDLPELLPLPILIKISMGKRQYETSEKGDFSFPLTTLRDDVILIIQDAGGNEVSRAGLFKEFAVE
XP_022965716.1 uncharacterized protein LOC111465530 isoform X2 [Cucurbita maxima]4.5e-3092.21Show/hide
Query:  MPGTIRVSVLEFMDLPELLPLPILIKISMGKRQYETSEKGDFSFPLTTLRDDVILIIQDAGGNEVSRAGLFKEFAVE
        MPGTIRVSVLEFMDLPELLPLPILIKISMGKRQYETSEKGDFSFPLTTLRDDVILIIQDAGGNEVSRAG+  +  VE
Subjt:  MPGTIRVSVLEFMDLPELLPLPILIKISMGKRQYETSEKGDFSFPLTTLRDDVILIIQDAGGNEVSRAGLFKEFAVE
TrEMBL top hitse value%identityAlignment
A0A6J1FBB0 uncharacterized protein LOC111444070 isoform X12.2e-3092.21Show/hide
Query:  MPGTIRVSVLEFMDLPELLPLPILIKISMGKRQYETSEKGDFSFPLTTLRDDVILIIQDAGGNEVSRAGLFKEFAVE
        MPGTIRVSVLEFMDLPELLPLPILIKISMGKRQYETSEKGDFSFPLTTLRDDVILIIQDAGGNEVSRAG+  +  VE
Subjt:  MPGTIRVSVLEFMDLPELLPLPILIKISMGKRQYETSEKGDFSFPLTTLRDDVILIIQDAGGNEVSRAGLFKEFAVE
A0A6J1FC61 uncharacterized protein LOC111444070 isoform X22.2e-3092.21Show/hide
Query:  MPGTIRVSVLEFMDLPELLPLPILIKISMGKRQYETSEKGDFSFPLTTLRDDVILIIQDAGGNEVSRAGLFKEFAVE
        MPGTIRVSVLEFMDLPELLPLPILIKISMGKRQYETSEKGDFSFPLTTLRDDVILIIQDAGGNEVSRAG+  +  VE
Subjt:  MPGTIRVSVLEFMDLPELLPLPILIKISMGKRQYETSEKGDFSFPLTTLRDDVILIIQDAGGNEVSRAGLFKEFAVE
A0A6J1FGW0 uncharacterized protein LOC111444070 isoform X32.2e-3092.21Show/hide
Query:  MPGTIRVSVLEFMDLPELLPLPILIKISMGKRQYETSEKGDFSFPLTTLRDDVILIIQDAGGNEVSRAGLFKEFAVE
        MPGTIRVSVLEFMDLPELLPLPILIKISMGKRQYETSEKGDFSFPLTTLRDDVILIIQDAGGNEVSRAG+  +  VE
Subjt:  MPGTIRVSVLEFMDLPELLPLPILIKISMGKRQYETSEKGDFSFPLTTLRDDVILIIQDAGGNEVSRAGLFKEFAVE
A0A6J1HMF6 uncharacterized protein LOC111465530 isoform X22.2e-3092.21Show/hide
Query:  MPGTIRVSVLEFMDLPELLPLPILIKISMGKRQYETSEKGDFSFPLTTLRDDVILIIQDAGGNEVSRAGLFKEFAVE
        MPGTIRVSVLEFMDLPELLPLPILIKISMGKRQYETSEKGDFSFPLTTLRDDVILIIQDAGGNEVSRAG+  +  VE
Subjt:  MPGTIRVSVLEFMDLPELLPLPILIKISMGKRQYETSEKGDFSFPLTTLRDDVILIIQDAGGNEVSRAGLFKEFAVE
A0A6J1HPI1 uncharacterized protein LOC111465530 isoform X12.2e-3092.21Show/hide
Query:  MPGTIRVSVLEFMDLPELLPLPILIKISMGKRQYETSEKGDFSFPLTTLRDDVILIIQDAGGNEVSRAGLFKEFAVE
        MPGTIRVSVLEFMDLPELLPLPILIKISMGKRQYETSEKGDFSFPLTTLRDDVILIIQDAGGNEVSRAG+  +  VE
Subjt:  MPGTIRVSVLEFMDLPELLPLPILIKISMGKRQYETSEKGDFSFPLTTLRDDVILIIQDAGGNEVSRAGLFKEFAVE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G56850.1 unknown protein2.9e-1139.24Show/hide
Query:  MPGTIRVSVLEFMDLPELLP--LPILIKISMGKRQYETSEKGDFSFPLTTLRDDVILIIQDAGGNEVSRAGLFKEFAVE
        MPGTI+VSVL  +D+    P      IK++MGK +Y+TS+ GD+ FP+T LR+++I+ + D  GN++ +  +     +E
Subjt:  MPGTIRVSVLEFMDLPELLP--LPILIKISMGKRQYETSEKGDFSFPLTTLRDDVILIIQDAGGNEVSRAGLFKEFAVE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGGGAACCATCCGAGTTTCTGTTCTGGAGTTCATGGACCTACCTGAGCTATTGCCTTTGCCAATTTTGATTAAGATTTCCATGGGAAAAAGACAGTATGAAACATC
GGAGAAAGGAGATTTCTCATTTCCATTGACGACGCTTCGAGATGATGTGATTCTTATAATTCAGGATGCTGGAGGGAATGAGGTATCACGTGCAGGTTTGTTCAAGGAAT
TTGCTGTTGAAATTGATTAG
mRNA sequenceShow/hide mRNA sequence
GATTCCTTTGCTCATCGCCAACCATTTTCCATCCTAAAAATTTCTCGACTCCAAATCTCTGTTTTCATGTAAAATTACCATAATTCAATCCTTTCTCTCCTTCGTGTTTC
TGATTTGCCTCAATCATGCCGGGAACCATCCGAGTTTCTGTTCTGGAGTTCATGGACCTACCTGAGCTATTGCCTTTGCCAATTTTGATTAAGATTTCCATGGGAAAAAG
ACAGTATGAAACATCGGAGAAAGGAGATTTCTCATTTCCATTGACGACGCTTCGAGATGATGTGATTCTTATAATTCAGGATGCTGGAGGGAATGAGGTATCACGTGCAG
GTTTGTTCAAGGAATTTGCTGTTGAAATTGATTAG
Protein sequenceShow/hide protein sequence
MPGTIRVSVLEFMDLPELLPLPILIKISMGKRQYETSEKGDFSFPLTTLRDDVILIIQDAGGNEVSRAGLFKEFAVEID