CuGenDBv2

Gene ID	Carg18637
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	40S ribosomal protein S3
Genome location	Carg_Chr12:11920057..11923136
RNA-Seq Expression	Carg18637
Synteny	Carg18637
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005634 - nucleus (cellular component) GO:0022627 - cytosolic small ribosomal subunit (cellular component) GO:0003723 - RNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR001351 - Ribosomal protein S3, C-terminal IPR004044 - K Homology domain, type 2 IPR005703 - Ribosomal protein S3, eukaryotic/archaeal IPR009019 - K homology domain superfamily, prokaryotic type IPR015946 - K homology domain-like, alpha/beta IPR018280 - Ribosomal protein S3, conserved site IPR036419 - Ribosomal protein S3, C-terminal domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6586486.1 40S ribosomal protein S3-1, partial [Cucurbita argyrosperma subsp. sororia]

1.4e-125

99.58

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  TTPLPDVVVIHSPKEEEEIVHRPAAAAAPPVLSADIEV
        TTPLPDVVVIHSPKEEEEIVHRPAAAAAPPVLSADIE+
Subjt:  TTPLPDVVVIHSPKEEEEIVHRPAAAAAPPVLSADIEV

XP_022938091.1 40S ribosomal protein S3-2-like [Cucurbita moschata]

3.6e-126

98.78

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  TTPLPDVVVIHSPKEEEEIVHRPAAAAAPPVLSADIEVVPEVVIAA
        TTPLPDVVVIHSPKEEEEIVHRPAAA   PVLSADIEVVPEVVIAA
Subjt:  TTPLPDVVVIHSPKEEEEIVHRPAAAAAPPVLSADIEVVPEVVIAA

XP_022946744.1 40S ribosomal protein S3-2-like [Cucurbita moschata]

2.8e-123

96.75

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  TTPLPDVVVIHSPKEEEEIVHRPAAAAAPPVLSADIEVVPEVVIAA
        TTPLPDVVVIHSPKEEEEIVHRPAAAAA  VL+ DIEV   VV+AA
Subjt:  TTPLPDVVVIHSPKEEEEIVHRPAAAAAPPVLSADIEVVPEVVIAA

XP_022965528.1 40S ribosomal protein S3-2-like [Cucurbita maxima]

2.5e-127

99.19

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  TTPLPDVVVIHSPKEEEEIVHRPAAAAAPPVLSADIEVVPEVVIAA
        TTPLPDVVVIHSPKEEEEIVHRP AAAAPPVLSADIEVVPEVV+AA
Subjt:  TTPLPDVVVIHSPKEEEEIVHRPAAAAAPPVLSADIEVVPEVVIAA

XP_023538264.1 40S ribosomal protein S3-2-like [Cucurbita pepo subsp. pepo]

2.7e-129

100

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  TTPLPDVVVIHSPKEEEEIVHRPAAAAAPPVLSADIEVVPEVVIAA
        TTPLPDVVVIHSPKEEEEIVHRPAAAAAPPVLSADIEVVPEVVIAA
Subjt:  TTPLPDVVVIHSPKEEEEIVHRPAAAAAPPVLSADIEVVPEVVIAA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LHQ6 KH type-2 domain-containing protein

1.4e-120

94.35

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  TTPLPDVVVIHSPKEEEEIVHRPAAAAAPPVLSADIEV---VPEVVIA
        TTPLPDVV IHSPKEEEEIVHRP     P VL+ADIEV   VP V +A
Subjt:  TTPLPDVVVIHSPKEEEEIVHRPAAAAAPPVLSADIEV---VPEVVIA

A0A6J1FC65 40S ribosomal protein S3-2-like

1.7e-126

98.78

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  TTPLPDVVVIHSPKEEEEIVHRPAAAAAPPVLSADIEVVPEVVIAA
        TTPLPDVVVIHSPKEEEEIVHRPAAA   PVLSADIEVVPEVVIAA
Subjt:  TTPLPDVVVIHSPKEEEEIVHRPAAAAAPPVLSADIEVVPEVVIAA

A0A6J1G4R4 40S ribosomal protein S3-2-like

1.4e-123

96.75

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  TTPLPDVVVIHSPKEEEEIVHRPAAAAAPPVLSADIEVVPEVVIAA
        TTPLPDVVVIHSPKEEEEIVHRPAAAAA  VL+ DIEV   VV+AA
Subjt:  TTPLPDVVVIHSPKEEEEIVHRPAAAAAPPVLSADIEVVPEVVIAA

A0A6J1HP95 40S ribosomal protein S3-2-like

1.2e-127

99.19

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  TTPLPDVVVIHSPKEEEEIVHRPAAAAAPPVLSADIEVVPEVVIAA
        TTPLPDVVVIHSPKEEEEIVHRP AAAAPPVLSADIEVVPEVV+AA
Subjt:  TTPLPDVVVIHSPKEEEEIVHRPAAAAAPPVLSADIEVVPEVVIAA

A0A6J1KF90 40S ribosomal protein S3-2-like

9.9e-122

95.93

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS VQKRFKFPENSVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  TTPLPDVVVIHSPKEEEEIVHRPAAAAAPPVLSADIEVVPEVVIAA
        TTPLPDVVVIHSPKEEEEIVHRP+AAAA  VL+ DIEV   VV+AA
Subjt:  TTPLPDVVVIHSPKEEEEIVHRPAAAAAPPVLSADIEVVPEVVIAA

SwissProt top hits

e value

%identity

Alignment

P02350 40S ribosomal protein S3-A

1.4e-96

84.72

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MA Q+SKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKRF FPE SVELYAEKV  RGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRF+MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PV  Y+D+AVRHVLLRQGVLGIKVKIML WDP GK GP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  TTPLPDVVVIHSPKEE
          PLPD V I  PK+E
Subjt:  TTPLPDVVVIHSPKEE

P47835 40S ribosomal protein S3-B

1.4e-96

84.72

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MA QMSKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP +TEIII ATRTQNVLGEKGRRIRELT+VVQKRF FPE SVELYAEKV  RGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRF+MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PV  Y+D+AVRHVLLRQGVLGIKVKIML WDP GK GP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  TTPLPDVVVIHSPKEE
          PLPD V I  PK+E
Subjt:  TTPLPDVVVIHSPKEE

Q9FJA6 40S ribosomal protein S3-3

2.9e-110

82.93

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP++SVELYAEKV NRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YID+AVRHVLLRQGVLG+KVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  TTPLPDVVVIHSPKEEE------EIVHRPAAAAAPPVLSADIEVVP
         TPLPDVV+IH+PKE++      ++V + A     P+ + D   +P
Subjt:  TTPLPDVVVIHSPKEEE------EIVHRPAAAAAPPVLSADIEVVP

Q9M339 40S ribosomal protein S3-2

6.2e-113

89.36

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        M TQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YIDSAVRHVLLRQGVLGIKVK+MLDWDPKG  GP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  TTPLPDVVVIHSPKEEEEIVHRPAAAAAPPVLSAD
         TPLPDVV+IHSPKEEE I + PA  AAP  L AD
Subjt:  TTPLPDVVVIHSPKEEEEIVHRPAAAAAPPVLSAD

Q9SIP7 40S ribosomal protein S3-1

1.7e-110

88.36

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YID+AVRHVLLRQGVLGIKVKIMLDWDP GK GP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  TTPLPDVVVIHSPKEEEEIVHRPAAAAAPPVL
         TPLPDVV+IH+PK ++ +   PA AAAP  L
Subjt:  TTPLPDVVVIHSPKEEEEIVHRPAAAAAPPVL

Arabidopsis top hits

e value

%identity

Alignment

AT2G31610.1 Ribosomal protein S3 family protein

1.2e-111

88.36

Show/hide

Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YID+AVRHVLLRQGVLGIKVKIMLDWDP GK GP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  TTPLPDVVVIHSPKEEEEIVHRPAAAAAPPVL
         TPLPDVV+IH+PK ++ +   PA AAAP  L
Subjt:  TTPLPDVVVIHSPKEEEEIVHRPAAAAAPPVL

AT3G53870.1 Ribosomal protein S3 family protein

4.4e-114

89.36

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Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        M TQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YIDSAVRHVLLRQGVLGIKVK+MLDWDPKG  GP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  TTPLPDVVVIHSPKEEEEIVHRPAAAAAPPVLSAD
         TPLPDVV+IHSPKEEE I + PA  AAP  L AD
Subjt:  TTPLPDVVVIHSPKEEEEIVHRPAAAAAPPVLSAD

AT5G35530.1 Ribosomal protein S3 family protein

2.0e-111

82.93

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Query:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA
        MATQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS+VQKRFKFP++SVELYAEKV NRGLCAIA
Subjt:  MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA

Query:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP
        QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YID+AVRHVLLRQGVLG+KVKIMLDWDPKGKQGP
Subjt:  QAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGP

Query:  TTPLPDVVVIHSPKEEE------EIVHRPAAAAAPPVLSADIEVVP
         TPLPDVV+IH+PKE++      ++V + A     P+ + D   +P
Subjt:  TTPLPDVVVIHSPKEEE------EIVHRPAAAAAPPVLSADIEVVP

Sequences

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CDS sequence

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ATGGCGACCCAGATGAGTAAGAAGAGAAAGTTCGTTGCCGATGGAGTGTTTTTTGCCGAGCTTAACGAGGTTTTGACCAGAGAGTTGGCTGAGGATGGATACTCCGGTGT
CGAGGTTAGAGTTACTCCTATGCGCACTGAGATCATCATCCGAGCCACCCGCACTCAAAACGTTCTCGGAGAAAAGGGTAGGAGGATTAGGGAACTCACCTCGGTTGTGC
AGAAGCGGTTCAAGTTTCCGGAGAACAGTGTTGAGCTTTACGCCGAGAAAGTTAACAACAGAGGGCTTTGTGCCATTGCCCAAGCTGAGTCTCTTCGCTACAAGCTACTT
GGTGGCCTTGCTGTGCGGAGGGCATGCTATGGTGTCTTGAGATTCGTTATGGAAAGTGGAGCAAAGGGATGCGAGGTGATTGTTAGTGGAAAACTGAGGGCACAGCGTGC
AAAGTCTATGAAGTTCAAAGATGGATATATGATATCTTCTGGTCAACCAGTGAGAGATTATATCGACTCGGCTGTTAGACACGTTCTTCTCAGACAGGGAGTTCTGGGTA
TCAAAGTTAAGATCATGCTTGATTGGGATCCCAAGGGCAAACAAGGCCCTACCACCCCTCTTCCTGATGTTGTGGTAATCCATTCCCCCAAGGAGGAAGAAGAAATCGTG
CATAGACCAGCAGCAGCAGCAGCACCACCAGTTTTGAGCGCTGATATTGAGGTTGTTCCAGAAGTAGTAATAGCAGCTTGA

mRNA sequence

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GCAGCGTTTCTTCCTCTGGAACGCGCGAAGAACAGAGCTTTCTCTTCTCACAACTTCGATCTTTTACGAGCGGATTTATTTCTCTTTTTCCAAACTCTCTTTGAGAATGG
CGACCCAGATGAGTAAGAAGAGAAAGTTCGTTGCCGATGGAGTGTTTTTTGCCGAGCTTAACGAGGTTTTGACCAGAGAGTTGGCTGAGGATGGATACTCCGGTGTCGAG
GTTAGAGTTACTCCTATGCGCACTGAGATCATCATCCGAGCCACCCGCACTCAAAACGTTCTCGGAGAAAAGGGTAGGAGGATTAGGGAACTCACCTCGGTTGTGCAGAA
GCGGTTCAAGTTTCCGGAGAACAGTGTTGAGCTTTACGCCGAGAAAGTTAACAACAGAGGGCTTTGTGCCATTGCCCAAGCTGAGTCTCTTCGCTACAAGCTACTTGGTG
GCCTTGCTGTGCGGAGGGCATGCTATGGTGTCTTGAGATTCGTTATGGAAAGTGGAGCAAAGGGATGCGAGGTGATTGTTAGTGGAAAACTGAGGGCACAGCGTGCAAAG
TCTATGAAGTTCAAAGATGGATATATGATATCTTCTGGTCAACCAGTGAGAGATTATATCGACTCGGCTGTTAGACACGTTCTTCTCAGACAGGGAGTTCTGGGTATCAA
AGTTAAGATCATGCTTGATTGGGATCCCAAGGGCAAACAAGGCCCTACCACCCCTCTTCCTGATGTTGTGGTAATCCATTCCCCCAAGGAGGAAGAAGAAATCGTGCATA
GACCAGCAGCAGCAGCAGCACCACCAGTTTTGAGCGCTGATATTGAGGTTGTTCCAGAAGTAGTAATAGCAGCTTGAGAGGGCTTCTTATCTAGATATTCATCTCTTGGT
TTGAGCGTTCTTTTTGATAATCAAACATAATGCATGTGAACAACAGTTTGTAACATTTTTTTTTGCTTAATCATTATTTATTTTGGACTCCTCTTGATTTT

Protein sequence

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MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLL
GGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVVVIHSPKEEEEIV
HRPAAAAAPPVLSADIEVVPEVVIAA

Carg18637 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome