; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg18658 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18658
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionStructural maintenance of chromosomes protein 5
Genome locationCarg_Chr17:7591702..7596101
RNA-Seq ExpressionCarg18658
SyntenyCarg18658
Gene Ontology termsGO:0000724 - double-strand break repair via homologous recombination (biological process)
GO:0007062 - sister chromatid cohesion (biological process)
GO:0005634 - nucleus (cellular component)
GO:0030915 - Smc5-Smc6 complex (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsIPR027131 - Structural maintenance of chromosomes protein 5
IPR027417 - P-loop containing nucleoside triphosphate hydrolase
IPR038729 - Rad50/SbcC-type AAA domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575703.1 Structural maintenance of chromosomes protein 5, partial [Cucurbita argyrosperma subsp. sororia]2.6e-15299.65Show/hide
Query:  MAEAKRRAKRPRITRGDDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLR
        MAEAKRRAKRPRITRGDDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLR
Subjt:  MAEAKRRAKRPRITRGDDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLR

Query:  GNTKEENITITRKMDTHNKSEWLFNGKVVPKKDVAGIIQSFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHRVLVEKSHDIKNIER
        GNTKEENITITRKMDTHNKSEWLFNGKVVPKKDV+GIIQSFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHRVLVEKSHDIKNIER
Subjt:  GNTKEENITITRKMDTHNKSEWLFNGKVVPKKDVAGIIQSFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHRVLVEKSHDIKNIER

Query:  AVEKNGDTLDQLKALNVEQEKDVERVRQREELLKKVESMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIE
        AVEKNGDTLDQLKALNVEQEKDVERVRQREELLKKVESMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIE
Subjt:  AVEKNGDTLDQLKALNVEQEKDVERVRQREELLKKVESMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIE

KAG7014259.1 Structural maintenance of chromosomes protein 5, partial [Cucurbita argyrosperma subsp. argyrosperma]3.9e-156100Show/hide
Query:  MAEAKRRAKRPRITRGDDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLR
        MAEAKRRAKRPRITRGDDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLR
Subjt:  MAEAKRRAKRPRITRGDDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLR

Query:  GNTKEENITITRKMDTHNKSEWLFNGKVVPKKDVAGIIQSFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHRVLVEKSHDIKNIER
        GNTKEENITITRKMDTHNKSEWLFNGKVVPKKDVAGIIQSFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHRVLVEKSHDIKNIER
Subjt:  GNTKEENITITRKMDTHNKSEWLFNGKVVPKKDVAGIIQSFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHRVLVEKSHDIKNIER

Query:  AVEKNGDTLDQLKALNVEQEKDVERVRQREELLKKVESMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIEYDHLV
        AVEKNGDTLDQLKALNVEQEKDVERVRQREELLKKVESMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIEYDHLV
Subjt:  AVEKNGDTLDQLKALNVEQEKDVERVRQREELLKKVESMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIEYDHLV

XP_022954044.1 structural maintenance of chromosomes protein 5 isoform X1 [Cucurbita moschata]1.2e-152100Show/hide
Query:  MAEAKRRAKRPRITRGDDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLR
        MAEAKRRAKRPRITRGDDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLR
Subjt:  MAEAKRRAKRPRITRGDDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLR

Query:  GNTKEENITITRKMDTHNKSEWLFNGKVVPKKDVAGIIQSFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHRVLVEKSHDIKNIER
        GNTKEENITITRKMDTHNKSEWLFNGKVVPKKDVAGIIQSFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHRVLVEKSHDIKNIER
Subjt:  GNTKEENITITRKMDTHNKSEWLFNGKVVPKKDVAGIIQSFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHRVLVEKSHDIKNIER

Query:  AVEKNGDTLDQLKALNVEQEKDVERVRQREELLKKVESMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIE
        AVEKNGDTLDQLKALNVEQEKDVERVRQREELLKKVESMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIE
Subjt:  AVEKNGDTLDQLKALNVEQEKDVERVRQREELLKKVESMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIE

XP_022991849.1 structural maintenance of chromosomes protein 5 isoform X1 [Cucurbita maxima]2.9e-15198.94Show/hide
Query:  MAEAKRRAKRPRITRGDDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLR
        MAEAK RAKRPRITRGDDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLR
Subjt:  MAEAKRRAKRPRITRGDDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLR

Query:  GNTKEENITITRKMDTHNKSEWLFNGKVVPKKDVAGIIQSFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHRVLVEKSHDIKNIER
        GNTKEENITITRKMDTHNKSEWLFNGKVVPKKDV+GIIQSFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHRVLVEKSHDIKNIER
Subjt:  GNTKEENITITRKMDTHNKSEWLFNGKVVPKKDVAGIIQSFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHRVLVEKSHDIKNIER

Query:  AVEKNGDTLDQLKALNVEQEKDVERVRQREELLKKVESMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIE
        AVEKNGDTLDQLKALNVEQEKDVERVRQREELL+KVESMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIE
Subjt:  AVEKNGDTLDQLKALNVEQEKDVERVRQREELLKKVESMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIE

XP_023547888.1 structural maintenance of chromosomes protein 5 isoform X1 [Cucurbita pepo subsp. pepo]3.4e-15299.65Show/hide
Query:  MAEAKRRAKRPRITRGDDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLR
        MAEAKRRAKRPRITRGDDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLR
Subjt:  MAEAKRRAKRPRITRGDDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLR

Query:  GNTKEENITITRKMDTHNKSEWLFNGKVVPKKDVAGIIQSFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHRVLVEKSHDIKNIER
        GN+KEENITITRKMDTHNKSEWLFNGKVVPKKDVAGIIQSFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHRVLVEKSHDIKNIER
Subjt:  GNTKEENITITRKMDTHNKSEWLFNGKVVPKKDVAGIIQSFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHRVLVEKSHDIKNIER

Query:  AVEKNGDTLDQLKALNVEQEKDVERVRQREELLKKVESMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIE
        AVEKNGDTLDQLKALNVEQEKDVERVRQREELLKKVESMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIE
Subjt:  AVEKNGDTLDQLKALNVEQEKDVERVRQREELLKKVESMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIE

TrEMBL top hitse value%identityAlignment
A0A1S3CE57 Structural maintenance of chromosomes protein 58.8e-14694.72Show/hide
Query:  MAEAKRRAKRPRITRGDDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLR
        MAE++ RAKRPRITRG+DDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLR
Subjt:  MAEAKRRAKRPRITRGDDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLR

Query:  GNTKEENITITRKMDTHNKSEWLFNGKVVPKKDVAGIIQSFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHRVLVEKSHDIKNIER
        GNTKEE ITITRKMDTHNKSEWLFNGKVVPKKDVAG+IQ FNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHR LV+KSH IK+IER
Subjt:  GNTKEENITITRKMDTHNKSEWLFNGKVVPKKDVAGIIQSFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHRVLVEKSHDIKNIER

Query:  AVEKNGDTLDQLKALNVEQEKDVERVRQREELLKKVESMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIE
        AVEKNG+TLDQLKALNVEQEKDVE VRQR+ELLKKVESMKKKLPWLKYDMKKAEY+EVKEKEKEAKKKLDEAANTLNDLKEPIE
Subjt:  AVEKNGDTLDQLKALNVEQEKDVERVRQREELLKKVESMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIE

A0A5A7UYJ7 Structural maintenance of chromosomes protein 58.8e-14694.72Show/hide
Query:  MAEAKRRAKRPRITRGDDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLR
        MAE++ RAKRPRITRG+DDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLR
Subjt:  MAEAKRRAKRPRITRGDDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLR

Query:  GNTKEENITITRKMDTHNKSEWLFNGKVVPKKDVAGIIQSFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHRVLVEKSHDIKNIER
        GNTKEE ITITRKMDTHNKSEWLFNGKVVPKKDVAG+IQ FNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHR LV+KSH IK+IER
Subjt:  GNTKEENITITRKMDTHNKSEWLFNGKVVPKKDVAGIIQSFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHRVLVEKSHDIKNIER

Query:  AVEKNGDTLDQLKALNVEQEKDVERVRQREELLKKVESMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIE
        AVEKNG+TLDQLKALNVEQEKDVE VRQR+ELLKKVESMKKKLPWLKYDMKKAEY+EVKEKEKEAKKKLDEAANTLNDLKEPIE
Subjt:  AVEKNGDTLDQLKALNVEQEKDVERVRQREELLKKVESMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIE

A0A6J1CY66 Structural maintenance of chromosomes protein 52.0e-14593.4Show/hide
Query:  MAEAKRRAKRPRITRGDDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLR
        MAE++ RAKRPRITRG+DDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATS+GAYVKRGEESGYVRITLR
Subjt:  MAEAKRRAKRPRITRGDDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLR

Query:  GNTKEENITITRKMDTHNKSEWLFNGKVVPKKDVAGIIQSFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHRVLVEKSHDIKNIER
        G+TKEENITI R+MDTHNKSEWLFNGKVVPKKDVAGIIQ FNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLP+LHR LVEKS DIKN+ER
Subjt:  GNTKEENITITRKMDTHNKSEWLFNGKVVPKKDVAGIIQSFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHRVLVEKSHDIKNIER

Query:  AVEKNGDTLDQLKALNVEQEKDVERVRQREELLKKVESMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIEYDHL
        AVEKNGDTLDQLKALNVEQEKDVERVRQR+ELLKKVESMKKKLPWLKYDMKKAEYMEVKEKEK+AKKKLDEAA TLNDLKEPIE   L
Subjt:  AVEKNGDTLDQLKALNVEQEKDVERVRQREELLKKVESMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIEYDHL

A0A6J1GRQ5 Structural maintenance of chromosomes protein 55.7e-153100Show/hide
Query:  MAEAKRRAKRPRITRGDDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLR
        MAEAKRRAKRPRITRGDDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLR
Subjt:  MAEAKRRAKRPRITRGDDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLR

Query:  GNTKEENITITRKMDTHNKSEWLFNGKVVPKKDVAGIIQSFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHRVLVEKSHDIKNIER
        GNTKEENITITRKMDTHNKSEWLFNGKVVPKKDVAGIIQSFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHRVLVEKSHDIKNIER
Subjt:  GNTKEENITITRKMDTHNKSEWLFNGKVVPKKDVAGIIQSFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHRVLVEKSHDIKNIER

Query:  AVEKNGDTLDQLKALNVEQEKDVERVRQREELLKKVESMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIE
        AVEKNGDTLDQLKALNVEQEKDVERVRQREELLKKVESMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIE
Subjt:  AVEKNGDTLDQLKALNVEQEKDVERVRQREELLKKVESMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIE

A0A6J1JVZ1 Structural maintenance of chromosomes protein 51.4e-15198.94Show/hide
Query:  MAEAKRRAKRPRITRGDDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLR
        MAEAK RAKRPRITRGDDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLR
Subjt:  MAEAKRRAKRPRITRGDDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLR

Query:  GNTKEENITITRKMDTHNKSEWLFNGKVVPKKDVAGIIQSFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHRVLVEKSHDIKNIER
        GNTKEENITITRKMDTHNKSEWLFNGKVVPKKDV+GIIQSFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHRVLVEKSHDIKNIER
Subjt:  GNTKEENITITRKMDTHNKSEWLFNGKVVPKKDVAGIIQSFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHRVLVEKSHDIKNIER

Query:  AVEKNGDTLDQLKALNVEQEKDVERVRQREELLKKVESMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIE
        AVEKNGDTLDQLKALNVEQEKDVERVRQREELL+KVESMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIE
Subjt:  AVEKNGDTLDQLKALNVEQEKDVERVRQREELLKKVESMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIE

SwissProt top hitse value%identityAlignment
Q5ZJY5 Structural maintenance of chromosomes protein 52.3e-4237.79Show/hide
Query:  GSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEENITITRKMD-THNKSE
        GSI+ I + NF+T++  + +PG  LN++IG NG+GKSSIVCAI LGL G+P  LGRA  VG +VK+G   G V I L      ENI ITR++    N S 
Subjt:  GSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEENITITRKMD-THNKSE

Query:  WLFNGKVVPKKDVAGIIQSFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHRVLVEKSHDIKNIERAVEKNGDTLDQLKALNVEQEK
        W  N K+   K V   + + NIQV+NL QFLPQD+V EFA+++ ++LLE TEK++G P++   H  L       + +E   +   ++L+++K      ++
Subjt:  WLFNGKVVPKKDVAGIIQSFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHRVLVEKSHDIKNIERAVEKNGDTLDQLKALNVEQEK

Query:  DVERVRQREELLKKVESMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPI
        DV+R  + +  L  ++ +++K PW++Y+  + ++ +VK++  +AK++L      L +++ P+
Subjt:  DVERVRQREELLKKVESMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPI

Q802R9 Structural maintenance of chromosomes protein 56.1e-4340Show/hide
Query:  MPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEENITITRKMDT-HNK
        M GSI+ I + NF+T+++ +  PG  LN+++G NG+GKSSIVCAI LGL G+  +LGR   VG YVKRG + G + I L  +    N+ ITR++   +N+
Subjt:  MPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEENITITRKMDT-HNK

Query:  SEWLFNGKVVPKKDVAGIIQSFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHRVLVEKSHDIKNIERAVEKNGDTLDQLKALNVEQ
        S W+ NGK   +K V   +++  IQV+NL QFLPQ++V EFAK++  +LLE TEK+VG P++   H  L       + +E  V +    +++ K  N   
Subjt:  SEWLFNGKVVPKKDVAGIIQSFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHRVLVEKSHDIKNIERAVEKNGDTLDQLKALNVEQ

Query:  EKDVERVRQREELLKKVESMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKL
        + DV R  +++  L  +E ++KK PW++Y+  + E   VK + +EAK+ L
Subjt:  EKDVERVRQREELLKKVESMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKL

Q8CG46 Structural maintenance of chromosomes protein 52.2e-4541.51Show/hide
Query:  PRITRGDDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEENITI
        P + R    ++ GSI+ I + NF+T++  +  PG  LN++IG NG+GKSSIVCAI LGL G+P  +GRA  VG +VKRG   G V I L   +   N+ I
Subjt:  PRITRGDDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEENITI

Query:  TRKMDT-HNKSEWLFNGKVVPKKDVAGIIQSFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHRVLVEKSHDIKNIERAVEKNGDTL
        TR++D   N+S W  N K V +K V   + + NIQV NL QFLPQD+V EFAKL+ ++LLE TEK+VG P++   H  L       K +E + ++  + L
Subjt:  TRKMDT-HNKSEWLFNGKVVPKKDVAGIIQSFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHRVLVEKSHDIKNIERAVEKNGDTL

Query:  DQLKALNVEQEKDVERVRQREELLKKVESMKKKLPWLKYDMKKAEYMEVK---EKEKEAKKKLDE
        +++   N   ++DVER  +R+  L  +E ++ K PW++Y+  + EY  VK   ++ KE  +KL E
Subjt:  DQLKALNVEQEKDVERVRQREELLKKVESMKKKLPWLKYDMKKAEYMEVK---EKEKEAKKKLDE

Q8IY18 Structural maintenance of chromosomes protein 51.1e-4439.78Show/hide
Query:  AKRRAKRPR--ITRGDDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRG
        +KR+   P+  + +    ++ GSI+ I + NF+T++  +  PG  LN+++G NG+GKSSIVCAI LGL G+P  +GRA  VG +VKRG   G V I L  
Subjt:  AKRRAKRPR--ITRGDDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRG

Query:  NTKEENITITRKMD-THNKSEWLFNGKVVPKKDVAGIIQSFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHRVLVEKSHDIKNIER
             N+ ITR++D   N+S W  N K   +K V   + + NIQV NL QFLPQD+V EFAKL+ ++LLE TEK++G P++   H  L       K +E 
Subjt:  NTKEENITITRKMD-THNKSEWLFNGKVVPKKDVAGIIQSFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHRVLVEKSHDIKNIER

Query:  AVEKNGDTLDQLKALNVEQEKDVERVRQREELLKKVESMKKKLPWLKYDMKKAEYMEVK---EKEKEAKKKLDE
        + ++  + L ++   N   ++DVER  +R+  L  +E ++ K PW++Y+  + EY EVK   ++ KE  +KL E
Subjt:  AVEKNGDTLDQLKALNVEQEKDVERVRQREELLKKVESMKKKLPWLKYDMKKAEYMEVK---EKEKEAKKKLDE

Q9LFS8 Structural maintenance of chromosomes protein 57.5e-12681.14Show/hide
Query:  AKRRAKRPRITRGDDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNT
        ++RRAKRP+I+RG+DD++PG+IIEIELHNFMTFNHL CKPGSRLNLVIGPNGSGKSS+VCAIAL LGGEPQLLGRATSVGAYVKRGE+SGYV+I+LRGNT
Subjt:  AKRRAKRPRITRGDDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNT

Query:  KEENITITRKMDTHNKSEWLFNGKVVPKKDVAGIIQSFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHRVLVEKSHDIKNIERAVE
        +EEN+TI RK+DT NKSEW+FNG  V KKD+  IIQ FNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLP+ HR LVEKS D+K +ERAV 
Subjt:  KEENITITRKMDTHNKSEWLFNGKVVPKKDVAGIIQSFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHRVLVEKSHDIKNIERAVE

Query:  KNGDTLDQLKALNVEQEKDVERVRQREELLKKVESMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIE
        KNG+TL+QLKAL  EQEKDVERVRQRE  L KV+SMKKKLPWLKYDMKKAEYM+ K++ KEA+KKLDEAA  LN +KEPIE
Subjt:  KNGDTLDQLKALNVEQEKDVERVRQREELLKKVESMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIE

Arabidopsis top hitse value%identityAlignment
AT3G54670.1 Structural maintenance of chromosomes (SMC) family protein1.4e-0725Show/hide
Query:  GSIIEIELHNFMTF-NHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEP-QLLGRATS--VGAYVKRGEE----SGYVRITLRGNTKEENITITRKM
        G I+++E+ NF ++  H    P      +IGPNGSGKS+++ AI+  LG    QL G      + A+  R +E      +VR+  + +   E +  TR +
Subjt:  GSIIEIELHNFMTF-NHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEP-QLLGRATS--VGAYVKRGEE----SGYVRITLRGNTKEENITITRKM

Query:  DTHNKSEWLFNGKVVPKKDVAGIIQSFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHRVLVEKSHDIKNIERAVEKNGDTLDQLKA
         +   SE+  + +VV   +  G ++S  I V      + Q  V   A   P +L    E+  G  +L   +  L EK    +     + +   T+   K 
Subjt:  DTHNKSEWLFNGKVVPKKDVAGIIQSFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHRVLVEKSHDIKNIERAVEKNGDTLDQLKA

Query:  LNVEQEKDVERVRQREELLKKVESMKKKLPWLKY----DMKKAE-------------YMEVKEKEKEAKKKLDEAANTLNDLKE
        L   Q+++ E+  + +E LK ++  +++  W  Y    D++KA                E+++ E+EA K+  E A  L ++ +
Subjt:  LNVEQEKDVERVRQREELLKKVESMKKKLPWLKY----DMKKAE-------------YMEVKEKEKEAKKKLDEAANTLNDLKE

AT3G54670.3 Structural maintenance of chromosomes (SMC) family protein1.4e-0725Show/hide
Query:  GSIIEIELHNFMTF-NHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEP-QLLGRATS--VGAYVKRGEE----SGYVRITLRGNTKEENITITRKM
        G I+++E+ NF ++  H    P      +IGPNGSGKS+++ AI+  LG    QL G      + A+  R +E      +VR+  + +   E +  TR +
Subjt:  GSIIEIELHNFMTF-NHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEP-QLLGRATS--VGAYVKRGEE----SGYVRITLRGNTKEENITITRKM

Query:  DTHNKSEWLFNGKVVPKKDVAGIIQSFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHRVLVEKSHDIKNIERAVEKNGDTLDQLKA
         +   SE+  + +VV   +  G ++S  I V      + Q  V   A   P +L    E+  G  +L   +  L EK    +     + +   T+   K 
Subjt:  DTHNKSEWLFNGKVVPKKDVAGIIQSFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHRVLVEKSHDIKNIERAVEKNGDTLDQLKA

Query:  LNVEQEKDVERVRQREELLKKVESMKKKLPWLKY----DMKKAE-------------YMEVKEKEKEAKKKLDEAANTLNDLKE
        L   Q+++ E+  + +E LK ++  +++  W  Y    D++KA                E+++ E+EA K+  E A  L ++ +
Subjt:  LNVEQEKDVERVRQREELLKKVESMKKKLPWLKY----DMKKAE-------------YMEVKEKEKEAKKKLDEAANTLNDLKE

AT5G07660.1 structural maintenance of chromosomes 6A3.1e-1024.39Show/hide
Query:  DDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKE--------ENI
        D     G I+ I L NFM  ++L+ + G  +N + G NGSGKS+I+ A+ +  G   +   RA ++  ++K G     V + L+   ++        + +
Subjt:  DDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKE--------ENI

Query:  TITRKMDTHNKSEWL--FNGKVVP--KKDVAGIIQSFNIQVNNLTQFLPQDRVCEFA-------------KLTPVQLLEETEKAVGDPQLPILHRVLVEK
         I R++        L    G+ +   K+++  +++ +NI V N    + QD+  EF              K T +Q +++  +++G  +L   + +L E 
Subjt:  TITRKMDTHNKSEWL--FNGKVVP--KKDVAGIIQSFNIQVNNLTQFLPQDRVCEFA-------------KLTPVQLLEETEKAVGDPQLPILHRVLVEK

Query:  SHDIKNIERAVEKNGDTLDQLKALNVEQEKDVERVRQREELLKKVESMKKKLPW-LKYDMKKAEYMEVKEKEKEAKKKLDEAANTLN
           IK IE+ + +            +E+ K++E V   EE+ ++V  +KKKL W   YD+ + +  E  EK  + K+++    N ++
Subjt:  SHDIKNIERAVEKNGDTLDQLKALNVEQEKDVERVRQREELLKKVESMKKKLPW-LKYDMKKAEYMEVKEKEKEAKKKLDEAANTLN

AT5G15920.1 structural maintenance of chromosomes 55.3e-12781.14Show/hide
Query:  AKRRAKRPRITRGDDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNT
        ++RRAKRP+I+RG+DD++PG+IIEIELHNFMTFNHL CKPGSRLNLVIGPNGSGKSS+VCAIAL LGGEPQLLGRATSVGAYVKRGE+SGYV+I+LRGNT
Subjt:  AKRRAKRPRITRGDDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNT

Query:  KEENITITRKMDTHNKSEWLFNGKVVPKKDVAGIIQSFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHRVLVEKSHDIKNIERAVE
        +EEN+TI RK+DT NKSEW+FNG  V KKD+  IIQ FNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLP+ HR LVEKS D+K +ERAV 
Subjt:  KEENITITRKMDTHNKSEWLFNGKVVPKKDVAGIIQSFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHRVLVEKSHDIKNIERAVE

Query:  KNGDTLDQLKALNVEQEKDVERVRQREELLKKVESMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIE
        KNG+TL+QLKAL  EQEKDVERVRQRE  L KV+SMKKKLPWLKYDMKKAEYM+ K++ KEA+KKLDEAA  LN +KEPIE
Subjt:  KNGDTLDQLKALNVEQEKDVERVRQREELLKKVESMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIE

AT5G61460.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein2.0e-0922.18Show/hide
Query:  GSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEE-------NITITRKMD
        GSI+ I++ NFM  ++L+ + G  +N + G NGSGKS+I+ A+ +  G   +   RA ++  ++K G     V++ ++ + ++         + I  +  
Subjt:  GSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEE-------NITITRKMD

Query:  THNKSEWL---FNGKVVPKK--DVAGIIQSFNIQVNNLTQFLPQDRVCEFA-------------KLTPVQLLEETEKAVGDPQLPILHRVLVEKSHDIKN
        T + +  +   + GK V  K  ++  +++ FNI V N    + QD+  EF              K T +Q + +  +++ +  L     ++ E  + IK 
Subjt:  THNKSEWL---FNGKVVPKK--DVAGIIQSFNIQVNNLTQFLPQDRVCEFA-------------KLTPVQLLEETEKAVGDPQLPILHRVLVEKSHDIKN

Query:  IERAVEKNGDTLDQLKALNVEQEKDVERVRQREELLKKVESMKKKLPW-LKYDMKK------AEYMEVKEKEKEAKKKLDEAANTLNDLKEPI
        IE+ +               E    ++ + Q EE+ ++++ +KKKL W   YD+ +       + +++KE+    + K+D     +  L++ +
Subjt:  IERAVEKNGDTLDQLKALNVEQEKDVERVRQREELLKKVESMKKKLPW-LKYDMKK------AEYMEVKEKEKEAKKKLDEAANTLNDLKEPI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAAGCCAAGCGTCGCGCAAAGCGCCCTAGAATTACGAGGGGGGACGATGATTATATGCCTGGAAGTATAATTGAGATTGAGCTTCATAACTTTATGACCTTTAA
CCACTTGAAATGTAAACCAGGATCACGTCTAAACCTTGTAATTGGGCCCAATGGATCTGGTAAAAGCTCTATTGTATGTGCTATTGCCCTTGGCCTTGGTGGTGAGCCTC
AGCTCCTTGGAAGGGCGACCAGTGTTGGAGCATATGTGAAGCGCGGGGAGGAGTCTGGTTATGTCAGAATAACCTTGAGAGGGAATACTAAAGAGGAGAATATTACAATT
ACACGTAAAATGGACACACACAACAAATCTGAGTGGTTGTTCAATGGAAAAGTTGTGCCAAAAAAGGATGTAGCTGGAATCATTCAAAGTTTTAACATTCAAGTTAATAA
CTTGACTCAATTTTTACCTCAGGACAGGGTTTGTGAGTTTGCCAAATTAACTCCCGTCCAACTTTTAGAAGAGACTGAAAAGGCAGTTGGCGATCCTCAACTTCCAATCC
TACATCGTGTACTTGTTGAGAAAAGCCATGACATAAAAAATATAGAACGAGCTGTTGAGAAAAATGGAGACACCCTAGATCAGCTAAAGGCATTAAATGTCGAGCAGGAG
AAAGATGTTGAGCGTGTTCGTCAAAGAGAAGAACTTTTAAAAAAGGTTGAGTCCATGAAAAAGAAGCTGCCATGGCTGAAGTATGACATGAAAAAGGCTGAATACATGGA
AGTTAAGGAAAAGGAAAAGGAGGCAAAAAAGAAGTTAGATGAAGCTGCAAATACTTTGAATGATTTAAAGGAGCCAATTGAGTATGATCACTTGGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGAAGCCAAGCGTCGCGCAAAGCGCCCTAGAATTACGAGGGGGGACGATGATTATATGCCTGGAAGTATAATTGAGATTGAGCTTCATAACTTTATGACCTTTAA
CCACTTGAAATGTAAACCAGGATCACGTCTAAACCTTGTAATTGGGCCCAATGGATCTGGTAAAAGCTCTATTGTATGTGCTATTGCCCTTGGCCTTGGTGGTGAGCCTC
AGCTCCTTGGAAGGGCGACCAGTGTTGGAGCATATGTGAAGCGCGGGGAGGAGTCTGGTTATGTCAGAATAACCTTGAGAGGGAATACTAAAGAGGAGAATATTACAATT
ACACGTAAAATGGACACACACAACAAATCTGAGTGGTTGTTCAATGGAAAAGTTGTGCCAAAAAAGGATGTAGCTGGAATCATTCAAAGTTTTAACATTCAAGTTAATAA
CTTGACTCAATTTTTACCTCAGGACAGGGTTTGTGAGTTTGCCAAATTAACTCCCGTCCAACTTTTAGAAGAGACTGAAAAGGCAGTTGGCGATCCTCAACTTCCAATCC
TACATCGTGTACTTGTTGAGAAAAGCCATGACATAAAAAATATAGAACGAGCTGTTGAGAAAAATGGAGACACCCTAGATCAGCTAAAGGCATTAAATGTCGAGCAGGAG
AAAGATGTTGAGCGTGTTCGTCAAAGAGAAGAACTTTTAAAAAAGGTTGAGTCCATGAAAAAGAAGCTGCCATGGCTGAAGTATGACATGAAAAAGGCTGAATACATGGA
AGTTAAGGAAAAGGAAAAGGAGGCAAAAAAGAAGTTAGATGAAGCTGCAAATACTTTGAATGATTTAAAGGAGCCAATTGAGTATGATCACTTGGTTTAACTATTTTGAT
AATCATTTTTCTTACAAGATCAAGAGTTTGAGTTAACCTTTTTGAAAAATCCAATCAGTATTCTATAATTTTTTTTATTT
Protein sequenceShow/hide protein sequence
MAEAKRRAKRPRITRGDDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEENITI
TRKMDTHNKSEWLFNGKVVPKKDVAGIIQSFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHRVLVEKSHDIKNIERAVEKNGDTLDQLKALNVEQE
KDVERVRQREELLKKVESMKKKLPWLKYDMKKAEYMEVKEKEKEAKKKLDEAANTLNDLKEPIEYDHLV