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Carg18662 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18662
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr17:7569594..7569845
RNA-Seq ExpressionCarg18662
SyntenyCarg18662
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058604.1 hypothetical protein E6C27_scaffold339G00730 [Cucumis melo var. makuwa]3.6e-2267.03Show/hide
Query:  MGKFVEILDAGVRIVARFHSHCPQTARMYYHPPANSNEGHHSDSQEFRLSG----GDVSSHQIVPCS----AAAAVVAVSAESTDFFLYSV
        MGK VEILDAG RIVARFHSHCPQT RMYYHPPANS++GHH  S+EFRL G    GD +SHQIV C      AAA + V+ ES +F LYSV
Subjt:  MGKFVEILDAGVRIVARFHSHCPQTARMYYHPPANSNEGHHSDSQEFRLSG----GDVSSHQIVPCS----AAAAVVAVSAESTDFFLYSV

KAG6575700.1 hypothetical protein SDJN03_26339, partial [Cucurbita argyrosperma subsp. sororia]1.2e-3697.59Show/hide
Query:  MGKFVEILDAGVRIVARFHSHCPQTARMYYHPPANSNEGHHSDSQEFRLSGGDVSSHQIVPCSAAAAVVAVSAESTDFFLYSV
        MGKFVEILDAGVRIVARFHSHCPQTARMYYHPPANSNE HHSD QEFRLSGGDVSSHQIVPCSAAAAVVAVSAESTDFFLYSV
Subjt:  MGKFVEILDAGVRIVARFHSHCPQTARMYYHPPANSNEGHHSDSQEFRLSGGDVSSHQIVPCSAAAAVVAVSAESTDFFLYSV

KAG7014255.1 hypothetical protein SDJN02_24430, partial [Cucurbita argyrosperma subsp. argyrosperma]2.8e-38100Show/hide
Query:  MGKFVEILDAGVRIVARFHSHCPQTARMYYHPPANSNEGHHSDSQEFRLSGGDVSSHQIVPCSAAAAVVAVSAESTDFFLYSV
        MGKFVEILDAGVRIVARFHSHCPQTARMYYHPPANSNEGHHSDSQEFRLSGGDVSSHQIVPCSAAAAVVAVSAESTDFFLYSV
Subjt:  MGKFVEILDAGVRIVARFHSHCPQTARMYYHPPANSNEGHHSDSQEFRLSGGDVSSHQIVPCSAAAAVVAVSAESTDFFLYSV

KGN45108.1 hypothetical protein Csa_015813 [Cucumis sativus]3.9e-2468.82Show/hide
Query:  MGKFVEILDAGVRIVARFHSHCPQTARMYYHPPANSNEGHHSDSQEFRLSG----GDVSSHQIVPC------SAAAAVVAVSAESTDFFLYSV
        MGK VEILDAG RIVARFHSHCPQT RMYYHPPANS++GHH  S+EFRL G    GD +SHQIVPC      +AAAAV+ V+ ES +F LYSV
Subjt:  MGKFVEILDAGVRIVARFHSHCPQTARMYYHPPANSNEGHHSDSQEFRLSG----GDVSSHQIVPC------SAAAAVVAVSAESTDFFLYSV

XP_022991949.1 uncharacterized protein LOC111488441 [Cucurbita maxima]8.6e-3297.3Show/hide
Query:  MGKFVEILDAGVRIVARFHSHCPQTARMYYHPPANSNEGHHSDSQEFRLSGGDVSSHQIVPCSAAAAVVAVSAE
        MGKFVEILDAGVRIVARFHSHCPQTARMYYHPPANSNEGHHSD QEFRLS GDVSSHQIVPCSAAAAVVAVSAE
Subjt:  MGKFVEILDAGVRIVARFHSHCPQTARMYYHPPANSNEGHHSDSQEFRLSGGDVSSHQIVPCSAAAAVVAVSAE

TrEMBL top hitse value%identityAlignment
A0A0A0K6I8 Uncharacterized protein1.9e-2468.82Show/hide
Query:  MGKFVEILDAGVRIVARFHSHCPQTARMYYHPPANSNEGHHSDSQEFRLSG----GDVSSHQIVPC------SAAAAVVAVSAESTDFFLYSV
        MGK VEILDAG RIVARFHSHCPQT RMYYHPPANS++GHH  S+EFRL G    GD +SHQIVPC      +AAAAV+ V+ ES +F LYSV
Subjt:  MGKFVEILDAGVRIVARFHSHCPQTARMYYHPPANSNEGHHSDSQEFRLSG----GDVSSHQIVPC------SAAAAVVAVSAESTDFFLYSV

A0A5A7UTW3 Uncharacterized protein1.8e-2267.03Show/hide
Query:  MGKFVEILDAGVRIVARFHSHCPQTARMYYHPPANSNEGHHSDSQEFRLSG----GDVSSHQIVPCS----AAAAVVAVSAESTDFFLYSV
        MGK VEILDAG RIVARFHSHCPQT RMYYHPPANS++GHH  S+EFRL G    GD +SHQIV C      AAA + V+ ES +F LYSV
Subjt:  MGKFVEILDAGVRIVARFHSHCPQTARMYYHPPANSNEGHHSDSQEFRLSG----GDVSSHQIVPCS----AAAAVVAVSAESTDFFLYSV

A0A5D3CEL3 Uncharacterized protein3.0e-2265.59Show/hide
Query:  MGKFVEILDAGVRIVARFHSHCPQTARMYYHPPANSNEGHHSDSQEFRLSG------GDVSSHQIVPCS----AAAAVVAVSAESTDFFLYSV
        MGK VEILDAG RIVARFHSHCPQT RMYYHPPANS++GHH  S+EFRL G      GD +SHQIV C      AAA + V+ ES +F LYSV
Subjt:  MGKFVEILDAGVRIVARFHSHCPQTARMYYHPPANSNEGHHSDSQEFRLSG------GDVSSHQIVPCS----AAAAVVAVSAESTDFFLYSV

A0A6J1JW88 uncharacterized protein LOC1114884414.2e-3297.3Show/hide
Query:  MGKFVEILDAGVRIVARFHSHCPQTARMYYHPPANSNEGHHSDSQEFRLSGGDVSSHQIVPCSAAAAVVAVSAE
        MGKFVEILDAGVRIVARFHSHCPQTARMYYHPPANSNEGHHSD QEFRLS GDVSSHQIVPCSAAAAVVAVSAE
Subjt:  MGKFVEILDAGVRIVARFHSHCPQTARMYYHPPANSNEGHHSDSQEFRLSGGDVSSHQIVPCSAAAAVVAVSAE

W9R4I1 Uncharacterized protein4.2e-1655.42Show/hide
Query:  MGKFVEILDAGVRIVARFHSHCPQTARMYYHPPANSNEGHHSDSQEFRLSGGDVSSHQIVPCSAAAAVVAVSAESTDFFLYSV
        MGKFVEILD GVRIVARFHSHCPQT+RMYYHPPAN++  HH+++  F   GGD     +         +   AE+ +F LYSV
Subjt:  MGKFVEILDAGVRIVARFHSHCPQTARMYYHPPANSNEGHHSDSQEFRLSGGDVSSHQIVPCSAAAAVVAVSAESTDFFLYSV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G57450.1 unknown protein8.6e-1458.62Show/hide
Query:  MGKFVEILDAGVRIVARFHSHCPQTARMYYHPPANSNEGHHSDSQEFRLSGGDVSSHQ
        MGK+ E+LD GVRI ARFHSHCPQTAR+YYHPP++ N  HH   ++    GG + S Q
Subjt:  MGKFVEILDAGVRIVARFHSHCPQTARMYYHPPANSNEGHHSDSQEFRLSGGDVSSHQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAGTTTGTCGAGATTCTCGACGCTGGCGTCAGGATTGTCGCCAGATTTCATTCGCATTGTCCTCAGACTGCTCGGATGTACTACCATCCGCCGGCTAACTCCAA
CGAAGGCCACCACTCCGACAGCCAGGAGTTTCGCCTTAGCGGCGGCGATGTGTCGTCTCATCAGATTGTTCCTTGCAGTGCCGCGGCCGCCGTTGTAGCCGTCAGCGCTG
AGAGTACTGATTTCTTTCTTTACTCTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAAGTTTGTCGAGATTCTCGACGCTGGCGTCAGGATTGTCGCCAGATTTCATTCGCATTGTCCTCAGACTGCTCGGATGTACTACCATCCGCCGGCTAACTCCAA
CGAAGGCCACCACTCCGACAGCCAGGAGTTTCGCCTTAGCGGCGGCGATGTGTCGTCTCATCAGATTGTTCCTTGCAGTGCCGCGGCCGCCGTTGTAGCCGTCAGCGCTG
AGAGTACTGATTTCTTTCTTTACTCTGTTTGA
Protein sequenceShow/hide protein sequence
MGKFVEILDAGVRIVARFHSHCPQTARMYYHPPANSNEGHHSDSQEFRLSGGDVSSHQIVPCSAAAAVVAVSAESTDFFLYSV