; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg18672 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18672
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNuclear transcription factor Y subunit
Genome locationCarg_Chr17:7508377..7511012
RNA-Seq ExpressionCarg18672
SyntenyCarg18672
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
InterPro domainsIPR001289 - Nuclear transcription factor Y subunit A
IPR018362 - CCAAT-binding factor, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575690.1 Nuclear transcription factor Y subunit A-9, partial [Cucurbita argyrosperma subsp. sororia]8.9e-178100Show/hide
Query:  MPSKPENVDQQIVDGSKYLVQSTKYSEAWWNGVGNNIIAGEDATKTASAEYLNDTVSSGGTQSQANDENIGKEVQHLKYIPFSASPPVGERLDLNSQMEL
        MPSKPENVDQQIVDGSKYLVQSTKYSEAWWNGVGNNIIAGEDATKTASAEYLNDTVSSGGTQSQANDENIGKEVQHLKYIPFSASPPVGERLDLNSQMEL
Subjt:  MPSKPENVDQQIVDGSKYLVQSTKYSEAWWNGVGNNIIAGEDATKTASAEYLNDTVSSGGTQSQANDENIGKEVQHLKYIPFSASPPVGERLDLNSQMEL

Query:  VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVGEAGSKYMVADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP
        SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVGEAGSKYMVADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP
Subjt:  SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVGEAGSKYMVADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP

Query:  HESMQVNGAPQRAIP
        HESMQVNGAPQRAIP
Subjt:  HESMQVNGAPQRAIP

KAG7014245.1 Nuclear transcription factor Y subunit A-9 [Cucurbita argyrosperma subsp. argyrosperma]6.1e-179100Show/hide
Query:  MPSKPENVDQQIVDGSKYLVQSTKYSEAWWNGVGNNIIAGEDATKTASAEYLNDTVSSGGTQSQANDENIGKEVQHLKYIPFSASPPVGERLDLNSQMEL
        MPSKPENVDQQIVDGSKYLVQSTKYSEAWWNGVGNNIIAGEDATKTASAEYLNDTVSSGGTQSQANDENIGKEVQHLKYIPFSASPPVGERLDLNSQMEL
Subjt:  MPSKPENVDQQIVDGSKYLVQSTKYSEAWWNGVGNNIIAGEDATKTASAEYLNDTVSSGGTQSQANDENIGKEVQHLKYIPFSASPPVGERLDLNSQMEL

Query:  VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVGEAGSKYMVADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP
        SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVGEAGSKYMVADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP
Subjt:  SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVGEAGSKYMVADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP

Query:  HESMQVNGAPQRAIPIN
        HESMQVNGAPQRAIPIN
Subjt:  HESMQVNGAPQRAIPIN

XP_022953565.1 nuclear transcription factor Y subunit A-4-like isoform X1 [Cucurbita moschata]1.4e-17598.11Show/hide
Query:  MPSKPENVDQQIVDGSKYLVQSTKYSEAWWNGVGNNIIAGEDATKTASAEYLNDTVSSGGTQSQANDENIGKEVQHLKYIPFSASPPVGERLDLNSQMEL
        MPSKPENVDQQIVDGSKYLVQSTKYS AWWNGVGNN IAGEDATKTASA+YLNDTVSSGGTQSQ NDENIGKEVQHLKYIPFSASPPVGERLDLNSQMEL
Subjt:  MPSKPENVDQQIVDGSKYLVQSTKYSEAWWNGVGNNIIAGEDATKTASAEYLNDTVSSGGTQSQANDENIGKEVQHLKYIPFSASPPVGERLDLNSQMEL

Query:  VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVGEAGSKYMVADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP
        SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPV EAGSKYM ADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP
Subjt:  SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVGEAGSKYMVADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP

Query:  HESMQVNGAPQRAIPIN
        HESMQVNGAPQRAIPIN
Subjt:  HESMQVNGAPQRAIPIN

XP_022991913.1 nuclear transcription factor Y subunit A-1-like isoform X1 [Cucurbita maxima]4.3e-17296.21Show/hide
Query:  MPSKPENVDQQIVDGSKYLVQSTKYSEAWWNGVGNNIIAGEDATKTASAEYLNDTVSSGGTQSQANDENIGKEVQHLKYIPFSASPPVGERLDLNSQMEL
        MPSKPENVDQQ VDGSKYLVQSTKYSEAWW+GVGNN IAGE+ATKTAS +YLNDTVSSGGTQSQANDENIGKEVQHLKYIPFS SPPVGERLDLNSQMEL
Subjt:  MPSKPENVDQQIVDGSKYLVQSTKYSEAWWNGVGNNIIAGEDATKTASAEYLNDTVSSGGTQSQANDENIGKEVQHLKYIPFSASPPVGERLDLNSQMEL

Query:  VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVGEAGSKYMVADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP
        SGGRFLNTKKPNNVISNTDRE+GIN GANH TKPV EAGSKYMVADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEG HLDQP
Subjt:  SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVGEAGSKYMVADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP

Query:  HESMQVNGAPQRAIPIN
        HESMQVNGAPQRAIPIN
Subjt:  HESMQVNGAPQRAIPIN

XP_023547827.1 nuclear transcription factor Y subunit A-4-like isoform X2 [Cucurbita pepo subsp. pepo]5.4e-17597.79Show/hide
Query:  MPSKPENVDQQIVDGSKYLVQSTKYSEAWWNGVGNNIIAGEDATKTASAEYLNDTVSSGGTQSQANDENIGKEVQHLKYIPFSASPPVGERLDLNSQMEL
        MPSKPENVDQQIVDGSKYLVQSTKYSEAWW+GVGNN IAGEDATKTASA+YLNDTVSSGGTQSQANDENIGKEVQHLKYIPFS SPPVGERLDLNSQMEL
Subjt:  MPSKPENVDQQIVDGSKYLVQSTKYSEAWWNGVGNNIIAGEDATKTASAEYLNDTVSSGGTQSQANDENIGKEVQHLKYIPFSASPPVGERLDLNSQMEL

Query:  VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVGEAGSKYMVADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP
        SGGRFLNTKKPNNVISNTDREEGINSG NHSTKPV EAGSKYM ADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP
Subjt:  SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVGEAGSKYMVADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP

Query:  HESMQVNGAPQRAIPIN
        HESMQVNGAPQRAIPIN
Subjt:  HESMQVNGAPQRAIPIN

TrEMBL top hitse value%identityAlignment
A0A0A0K612 Nuclear transcription factor Y subunit4.3e-15486.39Show/hide
Query:  MPSKPENVDQQIVDGSKYLVQSTKYSEAWWNGVGNNIIAGEDATKTASAEYLNDTVSSGGTQSQANDENIGKEVQHLKYIPFSASPPVGERLDLNSQMEL
        MPS+PENVDQQ+ DG+KYL+QSTK+SE WW+GVGNN IAGEDA KT+SAEYLN TV+SG TQ QANDENIGKEVQHLKYIPFS SPPVGE LDLNSQMEL
Subjt:  MPSKPENVDQQIVDGSKYLVQSTKYSEAWWNGVGNNIIAGEDATKTASAEYLNDTVSSGGTQSQANDENIGKEVQHLKYIPFSASPPVGERLDLNSQMEL

Query:  VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQYCQMLTS GPQ+T P IYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVGEAGSKYMVADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP
        SGGRFLNTKKPNNV+SNT+REE I+S ANHSTKPV EA SKYMV +E GIK+TL+E+ +EFMTQN+QIT AFFNGK N HG+STY+SQL DVEGGHLDQP
Subjt:  SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVGEAGSKYMVADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP

Query:  HESMQVNGAPQRAIPI
        HESMQVNGAPQRAIPI
Subjt:  HESMQVNGAPQRAIPI

A0A1S3CED9 Nuclear transcription factor Y subunit9.6e-15486.08Show/hide
Query:  MPSKPENVDQQIVDGSKYLVQSTKYSEAWWNGVGNNIIAGEDATKTASAEYLNDTVSSGGTQSQANDENIGKEVQHLKYIPFSASPPVGERLDLNSQMEL
        MPS+PENVDQQ+ D +KYL+QS+KYSE WW+GVGNN IAGEDA KT+SAEYLN TV+SG TQ QANDENIGKEVQHLKYIPFS SPPVGE LDLNSQMEL
Subjt:  MPSKPENVDQQIVDGSKYLVQSTKYSEAWWNGVGNNIIAGEDATKTASAEYLNDTVSSGGTQSQANDENIGKEVQHLKYIPFSASPPVGERLDLNSQMEL

Query:  VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQYCQMLTS GPQ+T P IYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVGEAGSKYMVADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP
        SGGRFLNTKKPNNV+SNT+REE INSGANHSTKPV E GSKYMV  E GIK+TL+E+ +E MTQN+QIT AFFNGK N HG+STY SQL DVEGGHLD P
Subjt:  SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVGEAGSKYMVADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP

Query:  HESMQVNGAPQRAIPI
        HESMQVNGAPQRAIPI
Subjt:  HESMQVNGAPQRAIPI

A0A6J1GNB7 Nuclear transcription factor Y subunit6.9e-17698.11Show/hide
Query:  MPSKPENVDQQIVDGSKYLVQSTKYSEAWWNGVGNNIIAGEDATKTASAEYLNDTVSSGGTQSQANDENIGKEVQHLKYIPFSASPPVGERLDLNSQMEL
        MPSKPENVDQQIVDGSKYLVQSTKYS AWWNGVGNN IAGEDATKTASA+YLNDTVSSGGTQSQ NDENIGKEVQHLKYIPFSASPPVGERLDLNSQMEL
Subjt:  MPSKPENVDQQIVDGSKYLVQSTKYSEAWWNGVGNNIIAGEDATKTASAEYLNDTVSSGGTQSQANDENIGKEVQHLKYIPFSASPPVGERLDLNSQMEL

Query:  VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVGEAGSKYMVADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP
        SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPV EAGSKYM ADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP
Subjt:  SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVGEAGSKYMVADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP

Query:  HESMQVNGAPQRAIPIN
        HESMQVNGAPQRAIPIN
Subjt:  HESMQVNGAPQRAIPIN

A0A6J1GNK9 Nuclear transcription factor Y subunit7.1e-15790.54Show/hide
Query:  MPSKPENVDQQIVDGSKYLVQSTKYSEAWWNGVGNNIIAGEDATKTASAEYLNDTVSSGGTQSQANDENIGKEVQHLKYIPFSASPPVGERLDLNSQMEL
        MPSKPENVDQQIVDGSKYLVQSTKYS AWWNGVGNN IAGEDATKTASA+YLNDTVSSGGTQSQ NDENIGKEVQHLKYIPFSASPPVGERLDLNSQMEL
Subjt:  MPSKPENVDQQIVDGSKYLVQSTKYSEAWWNGVGNNIIAGEDATKTASAEYLNDTVSSGGTQSQANDENIGKEVQHLKYIPFSASPPVGERLDLNSQMEL

Query:  VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSI                        FPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVGEAGSKYMVADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP
        SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPV EAGSKYM ADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP
Subjt:  SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVGEAGSKYMVADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP

Query:  HESMQVNGAPQRAIPIN
        HESMQVNGAPQRAIPIN
Subjt:  HESMQVNGAPQRAIPIN

A0A6J1JW53 Nuclear transcription factor Y subunit2.1e-17296.21Show/hide
Query:  MPSKPENVDQQIVDGSKYLVQSTKYSEAWWNGVGNNIIAGEDATKTASAEYLNDTVSSGGTQSQANDENIGKEVQHLKYIPFSASPPVGERLDLNSQMEL
        MPSKPENVDQQ VDGSKYLVQSTKYSEAWW+GVGNN IAGE+ATKTAS +YLNDTVSSGGTQSQANDENIGKEVQHLKYIPFS SPPVGERLDLNSQMEL
Subjt:  MPSKPENVDQQIVDGSKYLVQSTKYSEAWWNGVGNNIIAGEDATKTASAEYLNDTVSSGGTQSQANDENIGKEVQHLKYIPFSASPPVGERLDLNSQMEL

Query:  VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  VGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVGEAGSKYMVADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP
        SGGRFLNTKKPNNVISNTDRE+GIN GANH TKPV EAGSKYMVADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEG HLDQP
Subjt:  SGGRFLNTKKPNNVISNTDREEGINSGANHSTKPVGEAGSKYMVADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQP

Query:  HESMQVNGAPQRAIPIN
        HESMQVNGAPQRAIPIN
Subjt:  HESMQVNGAPQRAIPIN

SwissProt top hitse value%identityAlignment
Q84JP1 Nuclear transcription factor Y subunit A-71.1e-2651.91Show/hide
Query:  HSIVLTSYPFSDAQYCQMLTSNGPQSTFPH--IYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        +S+    YP+ D  Y  +        T  H  + G+    +PLP +  EEPV+VNAKQYHGILRRRQSRA+ E + KVIKSRKPYLHESRHLHA+RR RG
Subjt:  HSIVLTSYPFSDAQYCQMLTSNGPQSTFPH--IYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNNVISNTDREEGINSGANHS
         GGRFLN KK +    ++  EE  N  A  S
Subjt:  SGGRFLNTKKPNNVISNTDREEGINSGANHS

Q8VY64 Nuclear transcription factor Y subunit A-42.1e-2543.26Show/hide
Query:  SQANDENIGKEVQHLKYIPFSASPPVGERLDLNS-QMELVGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIY--------GLHHARMPLPLEMEEEPVY
        S  N+ +  KE    +  P   S    E +D NS   E + H +    YP+ D  Y  +      Q+  PH Y        G+    +PL  +  EEPV+
Subjt:  SQANDENIGKEVQHLKYIPFSASPPVGERLDLNS-QMELVGHSIVLTSYPFSDAQYCQMLTSNGPQSTFPHIY--------GLHHARMPLPLEMEEEPVY

Query:  VNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNTDREEGINSGANHS
        VNAKQYHGILRRRQSRAK E   + IK++KPY+HESRHLHA+RR RG GGRFLN KK N    +   EE   S  N S
Subjt:  VNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNTDREEGINSGANHS

Q945M9 Nuclear transcription factor Y subunit A-93.8e-3042.45Show/hide
Query:  NNIIAGEDATKTASAEYLNDTVSSGGTQSQANDENIGKEVQHLKYIPFSASPPVGERLDLNSQM------------ELVGHSI-VLTSYPFSDAQYCQML
        +++ AG+ ++K+ +       + S G++S +N +N   +   +   P SA    G+  D N +             +LVGH++   +S P+ D  Y  ++
Subjt:  NNIIAGEDATKTASAEYLNDTVSSGGTQSQANDENIGKEVQHLKYIPFSASPPVGERLDLNSQM------------ELVGHSI-VLTSYPFSDAQYCQML

Query:  TSNG--PQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNTD
         + G  P    P+  G+ H+RMPLP EM +EPV+VNAKQY  ILRRRQ+RAKAELEKK+IKSRKPYLHESRH HAMRR RG+GGRF   KK N   S   
Subjt:  TSNG--PQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNTD

Query:  REEGINSGANHS
         EE  N     S
Subjt:  REEGINSGANHS

Q9LXV5 Nuclear transcription factor Y subunit A-15.5e-2937.5Show/hide
Query:  MPSKPENVDQQIVDGSKYLVQSTKYSEAWW--NGVG-------NNIIAGEDATKTASAEYLNDTVSSGGTQSQANDENIG--KEVQ------HLKYIPFS
        M SKP   +++ V+    + Q   Y+E WW  N  G       + I +   +    +    ND V S       N EN G  K+ Q       +      
Subjt:  MPSKPENVDQQIVDGSKYLVQSTKYSEAWW--NGVG-------NNIIAGEDATKTASAEYLNDTVSSGGTQSQANDENIG--KEVQ------HLKYIPFS

Query:  ASPPVGERLDLNSQ-----MELVGHSIVLTSYPFSDAQYCQMLTSNGPQST-FPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKK
         + P     +++ Q      ELVGH I     P+ D  Y  ++ + G Q   F    G+   R  LPL+M +EPVYVNAKQY GILRRR++RAKAELE+K
Subjt:  ASPPVGERLDLNSQ-----MELVGHSIVLTSYPFSDAQYCQMLTSNGPQST-FPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKK

Query:  VIKSRKPYLHESRHLHAMRRARGSGGRFLNTK--KPNNVISNTDREEGINSGANHSTKPVGEAGSKYMVADENGIKDTLN
        VI+ RKPYLHESRH HAMRRAR SGGRF      +        DRE G  S  N S       GS+ +  D N   +TLN
Subjt:  VIKSRKPYLHESRHLHAMRRARGSGGRFLNTK--KPNNVISNTDREEGINSGANHSTKPVGEAGSKYMVADENGIKDTLN

Q9M9X4 Nuclear transcription factor Y subunit A-23.7e-2535.69Show/hide
Query:  AWWNGVGNNIIAGEDATKTASAEYLNDTVSSGGTQSQANDENIGKEVQHLKY------IPFSASPPVGERLDLNSQMELVGHS--IVLTSYPFSDAQYCQ
        +WW   G+  +A E      S  +    V S G   Q  D+       HL +       P     P G    + S    +G S   + T YP+ + QY  
Subjt:  AWWNGVGNNIIAGEDATKTASAEYLNDTVSSGGTQSQANDENIGKEVQHLKY------IPFSASPPVGERLDLNSQMELVGHS--IVLTSYPFSDAQYCQ

Query:  MLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAE--LEKKVIKS--RKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVI
        ++++ G QS            +PL +E E+  +YVN+KQYHGI+RRRQSRAKA   L++K + S  RKPY+H SRHLHA+RR RGSGGRFLNTK  N   
Subjt:  MLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAE--LEKKVIKS--RKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVI

Query:  SNTDREEGINSGANHSTKPVGEAGSK--YMVADENG---IKDTLNEEDKEFMTQN
        S T+ ++G  S    S     ++ S+   +V  ENG   + + LN    E  + N
Subjt:  SNTDREEGINSGANHSTKPVGEAGSK--YMVADENG---IKDTLNEEDKEFMTQN

Arabidopsis top hitse value%identityAlignment
AT3G20910.1 nuclear factor Y, subunit A92.7e-3142.45Show/hide
Query:  NNIIAGEDATKTASAEYLNDTVSSGGTQSQANDENIGKEVQHLKYIPFSASPPVGERLDLNSQM------------ELVGHSI-VLTSYPFSDAQYCQML
        +++ AG+ ++K+ +       + S G++S +N +N   +   +   P SA    G+  D N +             +LVGH++   +S P+ D  Y  ++
Subjt:  NNIIAGEDATKTASAEYLNDTVSSGGTQSQANDENIGKEVQHLKYIPFSASPPVGERLDLNSQM------------ELVGHSI-VLTSYPFSDAQYCQML

Query:  TSNG--PQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNTD
         + G  P    P+  G+ H+RMPLP EM +EPV+VNAKQY  ILRRRQ+RAKAELEKK+IKSRKPYLHESRH HAMRR RG+GGRF   KK N   S   
Subjt:  TSNG--PQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNTD

Query:  REEGINSGANHS
         EE  N     S
Subjt:  REEGINSGANHS

AT5G12840.1 nuclear factor Y, subunit A13.9e-3037.5Show/hide
Query:  MPSKPENVDQQIVDGSKYLVQSTKYSEAWW--NGVG-------NNIIAGEDATKTASAEYLNDTVSSGGTQSQANDENIG--KEVQ------HLKYIPFS
        M SKP   +++ V+    + Q   Y+E WW  N  G       + I +   +    +    ND V S       N EN G  K+ Q       +      
Subjt:  MPSKPENVDQQIVDGSKYLVQSTKYSEAWW--NGVG-------NNIIAGEDATKTASAEYLNDTVSSGGTQSQANDENIG--KEVQ------HLKYIPFS

Query:  ASPPVGERLDLNSQ-----MELVGHSIVLTSYPFSDAQYCQMLTSNGPQST-FPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKK
         + P     +++ Q      ELVGH I     P+ D  Y  ++ + G Q   F    G+   R  LPL+M +EPVYVNAKQY GILRRR++RAKAELE+K
Subjt:  ASPPVGERLDLNSQ-----MELVGHSIVLTSYPFSDAQYCQMLTSNGPQST-FPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKK

Query:  VIKSRKPYLHESRHLHAMRRARGSGGRFLNTK--KPNNVISNTDREEGINSGANHSTKPVGEAGSKYMVADENGIKDTLN
        VI+ RKPYLHESRH HAMRRAR SGGRF      +        DRE G  S  N S       GS+ +  D N   +TLN
Subjt:  VIKSRKPYLHESRHLHAMRRARGSGGRFLNTK--KPNNVISNTDREEGINSGANHSTKPVGEAGSKYMVADENGIKDTLN

AT5G12840.2 nuclear factor Y, subunit A15.1e-3037.63Show/hide
Query:  MPSKPENVDQQIVDGSKYLVQSTKYSEAWW--NGVG-------NNIIAGEDATKTASAEYLNDTVSSGGTQSQANDENIG--KEVQ-----HLKYIPFSA
        M SKP   +++ V+    + Q   Y+E WW  N  G       + I +   +    +    ND V S       N EN G  K+ Q              
Subjt:  MPSKPENVDQQIVDGSKYLVQSTKYSEAWW--NGVG-------NNIIAGEDATKTASAEYLNDTVSSGGTQSQANDENIG--KEVQ-----HLKYIPFSA

Query:  SPPVGERLDLNSQ-----MELVGHSIVLTSYPFSDAQYCQMLTSNGPQST-FPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKV
        + P     +++ Q      ELVGH I     P+ D  Y  ++ + G Q   F    G+   R  LPL+M +EPVYVNAKQY GILRRR++RAKAELE+KV
Subjt:  SPPVGERLDLNSQ-----MELVGHSIVLTSYPFSDAQYCQMLTSNGPQST-FPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKV

Query:  IKSRKPYLHESRHLHAMRRARGSGGRFLNTK--KPNNVISNTDREEGINSGANHSTKPVGEAGSKYMVADENGIKDTLN
        I+ RKPYLHESRH HAMRRAR SGGRF      +        DRE G  S  N S       GS+ +  D N   +TLN
Subjt:  IKSRKPYLHESRHLHAMRRARGSGGRFLNTK--KPNNVISNTDREEGINSGANHSTKPVGEAGSKYMVADENGIKDTLN

AT5G12840.3 nuclear factor Y, subunit A13.9e-3037.5Show/hide
Query:  MPSKPENVDQQIVDGSKYLVQSTKYSEAWW--NGVG-------NNIIAGEDATKTASAEYLNDTVSSGGTQSQANDENIG--KEVQ------HLKYIPFS
        M SKP   +++ V+    + Q   Y+E WW  N  G       + I +   +    +    ND V S       N EN G  K+ Q       +      
Subjt:  MPSKPENVDQQIVDGSKYLVQSTKYSEAWW--NGVG-------NNIIAGEDATKTASAEYLNDTVSSGGTQSQANDENIG--KEVQ------HLKYIPFS

Query:  ASPPVGERLDLNSQ-----MELVGHSIVLTSYPFSDAQYCQMLTSNGPQST-FPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKK
         + P     +++ Q      ELVGH I     P+ D  Y  ++ + G Q   F    G+   R  LPL+M +EPVYVNAKQY GILRRR++RAKAELE+K
Subjt:  ASPPVGERLDLNSQ-----MELVGHSIVLTSYPFSDAQYCQMLTSNGPQST-FPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKK

Query:  VIKSRKPYLHESRHLHAMRRARGSGGRFLNTK--KPNNVISNTDREEGINSGANHSTKPVGEAGSKYMVADENGIKDTLN
        VI+ RKPYLHESRH HAMRRAR SGGRF      +        DRE G  S  N S       GS+ +  D N   +TLN
Subjt:  VIKSRKPYLHESRHLHAMRRARGSGGRFLNTK--KPNNVISNTDREEGINSGANHSTKPVGEAGSKYMVADENGIKDTLN

AT5G12840.4 nuclear factor Y, subunit A15.1e-3037.63Show/hide
Query:  MPSKPENVDQQIVDGSKYLVQSTKYSEAWW--NGVG-------NNIIAGEDATKTASAEYLNDTVSSGGTQSQANDENIG--KEVQ-----HLKYIPFSA
        M SKP   +++ V+    + Q   Y+E WW  N  G       + I +   +    +    ND V S       N EN G  K+ Q              
Subjt:  MPSKPENVDQQIVDGSKYLVQSTKYSEAWW--NGVG-------NNIIAGEDATKTASAEYLNDTVSSGGTQSQANDENIG--KEVQ-----HLKYIPFSA

Query:  SPPVGERLDLNSQ-----MELVGHSIVLTSYPFSDAQYCQMLTSNGPQST-FPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKV
        + P     +++ Q      ELVGH I     P+ D  Y  ++ + G Q   F    G+   R  LPL+M +EPVYVNAKQY GILRRR++RAKAELE+KV
Subjt:  SPPVGERLDLNSQ-----MELVGHSIVLTSYPFSDAQYCQMLTSNGPQST-FPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKV

Query:  IKSRKPYLHESRHLHAMRRARGSGGRFLNTK--KPNNVISNTDREEGINSGANHSTKPVGEAGSKYMVADENGIKDTLN
        I+ RKPYLHESRH HAMRRAR SGGRF      +        DRE G  S  N S       GS+ +  D N   +TLN
Subjt:  IKSRKPYLHESRHLHAMRRARGSGGRFLNTK--KPNNVISNTDREEGINSGANHSTKPVGEAGSKYMVADENGIKDTLN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCATCAAAACCAGAAAATGTAGACCAACAAATAGTTGATGGGTCGAAGTATTTGGTACAATCGACCAAATACTCTGAGGCTTGGTGGAATGGAGTTGGGAACAATAT
CATCGCAGGTGAAGATGCTACCAAAACAGCTTCTGCAGAATACCTGAACGATACTGTTAGCAGTGGAGGAACGCAGTCACAAGCAAATGATGAAAATATTGGGAAAGAAG
TTCAGCATCTCAAGTACATTCCGTTTTCTGCATCCCCACCTGTGGGCGAACGCCTTGATCTAAATTCCCAGATGGAACTTGTTGGCCACTCAATTGTTTTGACATCATAT
CCTTTTTCAGATGCACAATATTGCCAAATGCTGACTTCTAATGGACCACAGTCAACGTTTCCTCATATTTATGGACTTCACCATGCTAGGATGCCTTTACCCCTTGAAAT
GGAAGAAGAACCCGTTTATGTAAATGCAAAGCAATATCATGGTATCCTGAGGAGAAGACAGTCGCGTGCCAAAGCTGAGCTTGAGAAGAAAGTGATAAAAAGTAGAAAGC
CATATCTTCATGAATCCAGACACCTCCATGCTATGAGACGAGCGAGAGGCAGTGGAGGACGTTTCCTCAATACCAAAAAGCCCAACAATGTTATTTCCAATACAGATAGG
GAGGAAGGCATCAATTCTGGTGCAAACCATTCAACAAAACCTGTCGGCGAGGCTGGATCAAAGTACATGGTGGCTGATGAAAATGGAATCAAGGATACGCTTAACGAGGA
GGACAAAGAGTTCATGACTCAAAATCTGCAGATAACACGTGCTTTCTTCAACGGAAAATTGAATGGCCATGGCATATCCACTTACACTTCACAACTTGCTGACGTCGAGG
GAGGTCATCTCGATCAGCCACATGAAAGCATGCAGGTGAATGGGGCTCCACAGAGGGCCATCCCCATCAATTGA
mRNA sequenceShow/hide mRNA sequence
GCGAGCGAGGTAGAGAGAGAGAGAGAGTCATGGAACTGAGCTAGAAGACCAGAGAGACCTTCAACCTAAAGCTCCCTAGGGTACGATCGTCTCTTTCGTAATCACATCGC
AGTTTATAAGTTTTGAACGATGCCATCAAAACCAGAAAATGTAGACCAACAAATAGTTGATGGGTCGAAGTATTTGGTACAATCGACCAAATACTCTGAGGCTTGGTGGA
ATGGAGTTGGGAACAATATCATCGCAGGTGAAGATGCTACCAAAACAGCTTCTGCAGAATACCTGAACGATACTGTTAGCAGTGGAGGAACGCAGTCACAAGCAAATGAT
GAAAATATTGGGAAAGAAGTTCAGCATCTCAAGTACATTCCGTTTTCTGCATCCCCACCTGTGGGCGAACGCCTTGATCTAAATTCCCAGATGGAACTTGTTGGCCACTC
AATTGTTTTGACATCATATCCTTTTTCAGATGCACAATATTGCCAAATGCTGACTTCTAATGGACCACAGTCAACGTTTCCTCATATTTATGGACTTCACCATGCTAGGA
TGCCTTTACCCCTTGAAATGGAAGAAGAACCCGTTTATGTAAATGCAAAGCAATATCATGGTATCCTGAGGAGAAGACAGTCGCGTGCCAAAGCTGAGCTTGAGAAGAAA
GTGATAAAAAGTAGAAAGCCATATCTTCATGAATCCAGACACCTCCATGCTATGAGACGAGCGAGAGGCAGTGGAGGACGTTTCCTCAATACCAAAAAGCCCAACAATGT
TATTTCCAATACAGATAGGGAGGAAGGCATCAATTCTGGTGCAAACCATTCAACAAAACCTGTCGGCGAGGCTGGATCAAAGTACATGGTGGCTGATGAAAATGGAATCA
AGGATACGCTTAACGAGGAGGACAAAGAGTTCATGACTCAAAATCTGCAGATAACACGTGCTTTCTTCAACGGAAAATTGAATGGCCATGGCATATCCACTTACACTTCA
CAACTTGCTGACGTCGAGGGAGGTCATCTCGATCAGCCACATGAAAGCATGCAGGTGAATGGGGCTCCACAGAGGGCCATCCCCATCAATTGA
Protein sequenceShow/hide protein sequence
MPSKPENVDQQIVDGSKYLVQSTKYSEAWWNGVGNNIIAGEDATKTASAEYLNDTVSSGGTQSQANDENIGKEVQHLKYIPFSASPPVGERLDLNSQMELVGHSIVLTSY
PFSDAQYCQMLTSNGPQSTFPHIYGLHHARMPLPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNNVISNTDR
EEGINSGANHSTKPVGEAGSKYMVADENGIKDTLNEEDKEFMTQNLQITRAFFNGKLNGHGISTYTSQLADVEGGHLDQPHESMQVNGAPQRAIPIN