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Carg18685 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18685
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein gamma response 1
Genome locationCarg_Chr17:7452825..7454111
RNA-Seq ExpressionCarg18685
SyntenyCarg18685
Gene Ontology termsGO:0006974 - cellular response to DNA damage stimulus (biological process)
GO:0090304 - nucleic acid metabolic process (biological process)
GO:0003677 - DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575679.1 SURP and G-patch domain-containing protein 1-like protein, partial [Cucurbita argyrosperma subsp. sororia]6.8e-4185.45Show/hide
Query:  MSSQSNRTARFFVGHYTYSPIDFSFRRLKSILHEIWRLTKITLSILEGPLLKDLLRSELLDEQFKVEEVSQHLNLKWREIDEGIELQQKLLEMFDELQKK
        MSSQSNRTARFFVGHYTYSPIDFSF RLKSILHEIWRLTKITLSILEGPLLKDLLRSELLDEQFKVEEVSQHLNLKWREIDEGIELQQKLLEM       
Subjt:  MSSQSNRTARFFVGHYTYSPIDFSFRRLKSILHEIWRLTKITLSILEGPLLKDLLRSELLDEQFKVEEVSQHLNLKWREIDEGIELQQKLLEMFDELQKK

Query:  LNEKTDEKLQ
        +  K  +K++
Subjt:  LNEKTDEKLQ

KAG6593314.1 Protein gamma response 1, partial [Cucurbita argyrosperma subsp. sororia]4.0e-0947.32Show/hide
Query:  DLLRSELLDEQFKVEEVSQHLNLKWREIDEGIELQQKLLEM-----------------------------------FDELQKKLNEKTDE-----KLQEN
        DLLR++LLDEQ KVEE+SQ L  K REIDEGIELQQKLLEM                                   F ELQKKLNEKTDE     KL+EN
Subjt:  DLLRSELLDEQFKVEEVSQHLNLKWREIDEGIELQQKLLEM-----------------------------------FDELQKKLNEKTDE-----KLQEN

Query:  LFEKLNYKLQKL
        LF+K+  +  ++
Subjt:  LFEKLNYKLQKL

KAG7014232.1 hypothetical protein SDJN02_24407, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-58100Show/hide
Query:  MSSQSNRTARFFVGHYTYSPIDFSFRRLKSILHEIWRLTKITLSILEGPLLKDLLRSELLDEQFKVEEVSQHLNLKWREIDEGIELQQKLLEMFDELQKK
        MSSQSNRTARFFVGHYTYSPIDFSFRRLKSILHEIWRLTKITLSILEGPLLKDLLRSELLDEQFKVEEVSQHLNLKWREIDEGIELQQKLLEMFDELQKK
Subjt:  MSSQSNRTARFFVGHYTYSPIDFSFRRLKSILHEIWRLTKITLSILEGPLLKDLLRSELLDEQFKVEEVSQHLNLKWREIDEGIELQQKLLEMFDELQKK

Query:  LNEKTDEKLQENLFEKLNYKLQKL
        LNEKTDEKLQENLFEKLNYKLQKL
Subjt:  LNEKTDEKLQENLFEKLNYKLQKL

XP_023004494.1 protein gamma response 1 [Cucurbita maxima]4.0e-0947.32Show/hide
Query:  DLLRSELLDEQFKVEEVSQHLNLKWREIDEGIELQQKLLEM-----------------------------------FDELQKKLNEKTDE-----KLQEN
        DLLR++LLDEQ KVEE+SQ L  K REIDEGIELQQKLLEM                                   F ELQKKLNEKTDE     KL+EN
Subjt:  DLLRSELLDEQFKVEEVSQHLNLKWREIDEGIELQQKLLEM-----------------------------------FDELQKKLNEKTDE-----KLQEN

Query:  LFEKLNYKLQKL
        LF+K+  +  ++
Subjt:  LFEKLNYKLQKL

XP_023514213.1 protein gamma response 1 [Cucurbita pepo subsp. pepo]9.0e-0946.43Show/hide
Query:  DLLRSELLDEQFKVEEVSQHLNLKWREIDEGIELQQKLLEM-----------------------------------FDELQKKLNEKTDE-----KLQEN
        DLLR++LLDEQ KVEE+SQ L  K REIDEGIELQQKLLEM                                   F ELQKKLNEKTDE     +L+EN
Subjt:  DLLRSELLDEQFKVEEVSQHLNLKWREIDEGIELQQKLLEM-----------------------------------FDELQKKLNEKTDE-----KLQEN

Query:  LFEKLNYKLQKL
        LF+K+  +  ++
Subjt:  LFEKLNYKLQKL

TrEMBL top hitse value%identityAlignment
A0A0A0K9T9 Uncharacterized protein1.3e-0846.43Show/hide
Query:  DLLRSELLDEQFKVEEVSQHLNLKWREIDEGIELQQKLLEM-----------------------------------FDELQKKLNEKTDE-----KLQEN
        DLLRS+LL EQ K EE++Q L  K REIDEGIELQQKLLEM                                   FDELQKKLN KTDE     KL+EN
Subjt:  DLLRSELLDEQFKVEEVSQHLNLKWREIDEGIELQQKLLEM-----------------------------------FDELQKKLNEKTDE-----KLQEN

Query:  LFEKLNYKLQKL
        LF+KL  +  ++
Subjt:  LFEKLNYKLQKL

A0A1S3CDW1 protein gamma response 15.7e-0947.32Show/hide
Query:  DLLRSELLDEQFKVEEVSQHLNLKWREIDEGIELQQKLLEM-----------------------------------FDELQKKLNEKTDE-----KLQEN
        DLLRS+LL EQ K EE+SQ L  K REIDEGIELQQKLLEM                                   FDELQKKLN KTDE     KL+EN
Subjt:  DLLRSELLDEQFKVEEVSQHLNLKWREIDEGIELQQKLLEM-----------------------------------FDELQKKLNEKTDE-----KLQEN

Query:  LFEKLNYKLQKL
        LF+KL  +  ++
Subjt:  LFEKLNYKLQKL

A0A5A7URX2 Protein gamma response 15.7e-0947.32Show/hide
Query:  DLLRSELLDEQFKVEEVSQHLNLKWREIDEGIELQQKLLEM-----------------------------------FDELQKKLNEKTDE-----KLQEN
        DLLRS+LL EQ K EE+SQ L  K REIDEGIELQQKLLEM                                   FDELQKKLN KTDE     KL+EN
Subjt:  DLLRSELLDEQFKVEEVSQHLNLKWREIDEGIELQQKLLEM-----------------------------------FDELQKKLNEKTDE-----KLQEN

Query:  LFEKLNYKLQKL
        LF+KL  +  ++
Subjt:  LFEKLNYKLQKL

A0A6J1H6V6 protein gamma response 19.7e-0946.43Show/hide
Query:  DLLRSELLDEQFKVEEVSQHLNLKWREIDEGIELQQKLLEM-----------------------------------FDELQKKLNEKTDE-----KLQEN
        DLLR++LLDEQ KVEE+SQ L  K REIDE IELQQKLLEM                                   F ELQKKLNEKTDE     KL+EN
Subjt:  DLLRSELLDEQFKVEEVSQHLNLKWREIDEGIELQQKLLEM-----------------------------------FDELQKKLNEKTDE-----KLQEN

Query:  LFEKLNYKLQKL
        LF+K+  +  ++
Subjt:  LFEKLNYKLQKL

A0A6J1KWF2 protein gamma response 12.0e-0947.32Show/hide
Query:  DLLRSELLDEQFKVEEVSQHLNLKWREIDEGIELQQKLLEM-----------------------------------FDELQKKLNEKTDE-----KLQEN
        DLLR++LLDEQ KVEE+SQ L  K REIDEGIELQQKLLEM                                   F ELQKKLNEKTDE     KL+EN
Subjt:  DLLRSELLDEQFKVEEVSQHLNLKWREIDEGIELQQKLLEM-----------------------------------FDELQKKLNEKTDE-----KLQEN

Query:  LFEKLNYKLQKL
        LF+K+  +  ++
Subjt:  LFEKLNYKLQKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAAGTCAATCGAATAGAACTGCGAGGTTTTTCGTCGGCCACTATACGTATTCTCCTATTGACTTCAGTTTTCGTCGATTAAAGAGCATTCTACATGAGATATGGAG
GCTGACCAAGATCACTCTCTCAATCTTGGAGGGTCCTTTGTTGAAGGATTTATTGCGATCCGAACTACTGGATGAACAATTCAAAGTTGAGGAGGTATCACAGCATCTTA
ATCTGAAATGGAGAGAAATTGATGAGGGAATTGAATTGCAGCAGAAATTACTTGAAATGTTTGATGAGCTCCAAAAGAAGCTTAATGAGAAGACAGATGAAAAGTTGCAA
GAGAACTTGTTCGAAAAATTGAATTACAAGCTTCAGAAATTATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAAGTCAATCGAATAGAACTGCGAGGTTTTTCGTCGGCCACTATACGTATTCTCCTATTGACTTCAGTTTTCGTCGATTAAAGAGCATTCTACATGAGATATGGAG
GCTGACCAAGATCACTCTCTCAATCTTGGAGGGTCCTTTGTTGAAGGATTTATTGCGATCCGAACTACTGGATGAACAATTCAAAGTTGAGGAGGTATCACAGCATCTTA
ATCTGAAATGGAGAGAAATTGATGAGGGAATTGAATTGCAGCAGAAATTACTTGAAATGTTTGATGAGCTCCAAAAGAAGCTTAATGAGAAGACAGATGAAAAGTTGCAA
GAGAACTTGTTCGAAAAATTGAATTACAAGCTTCAGAAATTATGA
Protein sequenceShow/hide protein sequence
MSSQSNRTARFFVGHYTYSPIDFSFRRLKSILHEIWRLTKITLSILEGPLLKDLLRSELLDEQFKVEEVSQHLNLKWREIDEGIELQQKLLEMFDELQKKLNEKTDEKLQ
ENLFEKLNYKLQKL