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Carg18686 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18686
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein gamma response 1
Genome locationCarg_Chr17:7451520..7452755
RNA-Seq ExpressionCarg18686
SyntenyCarg18686
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058643.1 protein gamma response 1 [Cucumis melo var. makuwa]5.7e-0267.35Show/hide
Query:  ELLKKAE--KEG-KCKQILLQQINSAGSEISKNKVQLEEFLKEKKQLLA
        EL  K E  +EG K +  LLQQI+SAGSEISKNK QLEE  KE KQLLA
Subjt:  ELLKKAE--KEG-KCKQILLQQINSAGSEISKNKVQLEEFLKEKKQLLA

KAG7014231.1 hypothetical protein SDJN02_24406, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-73100Show/hide
Query:  MELLKKAEKEGKCKQILLQQINSAGSEISKNKVQLEEFLKEKKQLLADGLHLIGDIQGLVVKRRRGVTHMTIFFKNIIENLNKAMKERVHNLALLEVVVK
        MELLKKAEKEGKCKQILLQQINSAGSEISKNKVQLEEFLKEKKQLLADGLHLIGDIQGLVVKRRRGVTHMTIFFKNIIENLNKAMKERVHNLALLEVVVK
Subjt:  MELLKKAEKEGKCKQILLQQINSAGSEISKNKVQLEEFLKEKKQLLADGLHLIGDIQGLVVKRRRGVTHMTIFFKNIIENLNKAMKERVHNLALLEVVVK

Query:  DINMDVSHNETQRFECFLIHHTINRGVEPMRTNASTALSFMMLFFKMM
        DINMDVSHNETQRFECFLIHHTINRGVEPMRTNASTALSFMMLFFKMM
Subjt:  DINMDVSHNETQRFECFLIHHTINRGVEPMRTNASTALSFMMLFFKMM

XP_008461271.1 PREDICTED: protein gamma response 1 [Cucumis melo]5.7e-0267.35Show/hide
Query:  ELLKKAE--KEG-KCKQILLQQINSAGSEISKNKVQLEEFLKEKKQLLA
        EL  K E  +EG K +  LLQQI+SAGSEISKNK QLEE  KE KQLLA
Subjt:  ELLKKAE--KEG-KCKQILLQQINSAGSEISKNKVQLEEFLKEKKQLLA

XP_008461271.1 PREDICTED: protein gamma response 1 [Cucumis melo]7.9e-0449.33Show/hide
Query:  FKNIIENLNKAMKERVHNLALLEVVVKDINMDVSHNETQRFEC---------FLIHHTINRG-----VEPMRTNA
        F+NI ENLN  +K+RV +L L EVVVKDINMDVS +ETQ               I  T NRG     VEP+R  A
Subjt:  FKNIIENLNKAMKERVHNLALLEVVVKDINMDVSHNETQRFEC---------FLIHHTINRG-----VEPMRTNA

XP_038897263.1 protein gamma response 1 [Benincasa hispida]2.7e-0448.65Show/hide
Query:  FKNIIENLNKAMKERVHNLALLEVVVKDINMDVSHNETQRFEC--------FLIHHTINRG-----VEPMRTNA
        F+NI ENLNK +K+RV +L L EVVVKDINMD+S +ETQ              +  T NRG     VEP+R  A
Subjt:  FKNIIENLNKAMKERVHNLALLEVVVKDINMDVSHNETQRFEC--------FLIHHTINRG-----VEPMRTNA

XP_038897263.1 protein gamma response 1 [Benincasa hispida]4.7e-0473.47Show/hide
Query:  ELLKKAE--KEG-KCKQILLQQINSAGSEISKNKVQLEEFLKEKKQLLA
        ELLKK E  +EG K +  LLQQI+SAGSEISKNKVQLEEF KE K+LLA
Subjt:  ELLKKAE--KEG-KCKQILLQQINSAGSEISKNKVQLEEFLKEKKQLLA

XP_038897263.1 protein gamma response 1 [Benincasa hispida]7.9e-0449.33Show/hide
Query:  FKNIIENLNKAMKERVHNLALLEVVVKDINMDVSHNETQRFEC---------FLIHHTINRG-----VEPMRTNA
        F+NI ENLN  +K+RV +L L EVVVKDINMDVS +ETQ               I  T NRG     VEP+R  A
Subjt:  FKNIIENLNKAMKERVHNLALLEVVVKDINMDVSHNETQRFEC---------FLIHHTINRG-----VEPMRTNA

TrEMBL top hitse value%identityAlignment
A0A1S3CDW1 protein gamma response 12.8e-0267.35Show/hide
Query:  ELLKKAE--KEG-KCKQILLQQINSAGSEISKNKVQLEEFLKEKKQLLA
        EL  K E  +EG K +  LLQQI+SAGSEISKNK QLEE  KE KQLLA
Subjt:  ELLKKAE--KEG-KCKQILLQQINSAGSEISKNKVQLEEFLKEKKQLLA

A0A5A7URX2 Protein gamma response 13.8e-0449.33Show/hide
Query:  FKNIIENLNKAMKERVHNLALLEVVVKDINMDVSHNETQRFEC---------FLIHHTINRG-----VEPMRTNA
        F+NI ENLN  +K+RV +L L EVVVKDINMDVS +ETQ               I  T NRG     VEP+R  A
Subjt:  FKNIIENLNKAMKERVHNLALLEVVVKDINMDVSHNETQRFEC---------FLIHHTINRG-----VEPMRTNA

A0A5A7URX2 Protein gamma response 12.8e-0267.35Show/hide
Query:  ELLKKAE--KEG-KCKQILLQQINSAGSEISKNKVQLEEFLKEKKQLLA
        EL  K E  +EG K +  LLQQI+SAGSEISKNK QLEE  KE KQLLA
Subjt:  ELLKKAE--KEG-KCKQILLQQINSAGSEISKNKVQLEEFLKEKKQLLA

A0A5A7URX2 Protein gamma response 13.8e-0449.33Show/hide
Query:  FKNIIENLNKAMKERVHNLALLEVVVKDINMDVSHNETQRFEC---------FLIHHTINRG-----VEPMRTNA
        F+NI ENLN  +K+RV +L L EVVVKDINMDVS +ETQ               I  T NRG     VEP+R  A
Subjt:  FKNIIENLNKAMKERVHNLALLEVVVKDINMDVSHNETQRFEC---------FLIHHTINRG-----VEPMRTNA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCTTTTGAAGAAGGCTGAAAAGGAAGGAAAATGCAAACAAATTTTGCTTCAGCAAATTAATTCAGCTGGCTCAGAAATATCAAAGAACAAAGTGCAGCTCGAGGA
ATTTCTGAAAGAGAAAAAACAACTTTTAGCCGATGGTCTCCATCTTATTGGAGATATACAAGGACTCGTCGTCAAGCGCAGGCGGGGCGTGACGCACATGACGATTTTCT
TCAAGAACATCATAGAGAATTTAAACAAGGCTATGAAGGAAAGAGTTCATAATCTTGCTCTTCTTGAAGTGGTTGTAAAAGATATCAATATGGATGTCTCACACAACGAG
ACCCAGAGATTTGAATGCTTTTTAATCCACCACACAATCAATAGAGGCGTGGAGCCAATGAGAACGAATGCAAGCACTGCATTAAGTTTTATGATGCTGTTCTTCAAAAT
GATG
mRNA sequenceShow/hide mRNA sequence
ATGGAGCTTTTGAAGAAGGCTGAAAAGGAAGGAAAATGCAAACAAATTTTGCTTCAGCAAATTAATTCAGCTGGCTCAGAAATATCAAAGAACAAAGTGCAGCTCGAGGA
ATTTCTGAAAGAGAAAAAACAACTTTTAGCCGATGGTCTCCATCTTATTGGAGATATACAAGGACTCGTCGTCAAGCGCAGGCGGGGCGTGACGCACATGACGATTTTCT
TCAAGAACATCATAGAGAATTTAAACAAGGCTATGAAGGAAAGAGTTCATAATCTTGCTCTTCTTGAAGTGGTTGTAAAAGATATCAATATGGATGTCTCACACAACGAG
ACCCAGAGATTTGAATGCTTTTTAATCCACCACACAATCAATAGAGGCGTGGAGCCAATGAGAACGAATGCAAGCACTGCATTAAGTTTTATGATGCTGTTCTTCAAAAT
GATG
Protein sequenceShow/hide protein sequence
MELLKKAEKEGKCKQILLQQINSAGSEISKNKVQLEEFLKEKKQLLADGLHLIGDIQGLVVKRRRGVTHMTIFFKNIIENLNKAMKERVHNLALLEVVVKDINMDVSHNE
TQRFECFLIHHTINRGVEPMRTNASTALSFMMLFFKMM