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Carg18696 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18696
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein trichome birefringence-like 14 isoform X1
Genome locationCarg_Chr17:7405421..7408674
RNA-Seq ExpressionCarg18696
SyntenyCarg18696
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575669.1 hypothetical protein SDJN03_26308, partial [Cucurbita argyrosperma subsp. sororia]7.9e-8671.89Show/hide
Query:  MVRGGHLSIAMVVLMFTSILLWGWDKSYFASFLPLTRQQYMIPLSEYVVAVSNSSSTPKDEMVKSENKMKGRSNNTNEKEQPGKGSDYFDADSISKPTPI
        MVRGGHLSIAMVVLMFTSILLWGWDKSYFASFLPLTRQQYMIPLSEYVVAVSNSSSTPKDEMVKSENKMKGRSNNTNEKEQPGKGSDYFDADSISKPTPI
Subjt:  MVRGGHLSIAMVVLMFTSILLWGWDKSYFASFLPLTRQQYMIPLSEYVVAVSNSSSTPKDEMVKSENKMKGRSNNTNEKEQPGKGSDYFDADSISKPTPI

Query:  SKAFDLFKN--------------DIQFISKILLLFQ--FATTPKVDGLKTTGGHGIPGGNRKIATCLSLSVHHSLEGETDLQKLGNKRRLSELEVTVNQI
        SK  +  K                   I ++L + +     + + +  +      I  G +  +    +    +   ETDLQKLGNKRRLSELEVTVNQI
Subjt:  SKAFDLFKN--------------DIQFISKILLLFQ--FATTPKVDGLKTTGGHGIPGGNRKIATCLSLSVHHSLEGETDLQKLGNKRRLSELEVTVNQI

Query:  LVCVWRAVVCVSCLNVLHHGRPLKIEKEGSNPGELRLWEKKASYCALGF
        LVCVWRAVVCVSCLNVLHHGRPLKIEKEGSNPGELRLWEKKASYCALGF
Subjt:  LVCVWRAVVCVSCLNVLHHGRPLKIEKEGSNPGELRLWEKKASYCALGF

KAG7014221.1 hypothetical protein SDJN02_24396 [Cucurbita argyrosperma subsp. argyrosperma]1.6e-131100Show/hide
Query:  MKGGNIIMVRGGHLSIAMVVLMFTSILLWGWDKSYFASFLPLTRQQYMIPLSEYVVAVSNSSSTPKDEMVKSENKMKGRSNNTNEKEQPGKGSDYFDADS
        MKGGNIIMVRGGHLSIAMVVLMFTSILLWGWDKSYFASFLPLTRQQYMIPLSEYVVAVSNSSSTPKDEMVKSENKMKGRSNNTNEKEQPGKGSDYFDADS
Subjt:  MKGGNIIMVRGGHLSIAMVVLMFTSILLWGWDKSYFASFLPLTRQQYMIPLSEYVVAVSNSSSTPKDEMVKSENKMKGRSNNTNEKEQPGKGSDYFDADS

Query:  ISKPTPISKAFDLFKNDIQFISKILLLFQFATTPKVDGLKTTGGHGIPGGNRKIATCLSLSVHHSLEGETDLQKLGNKRRLSELEVTVNQILVCVWRAVV
        ISKPTPISKAFDLFKNDIQFISKILLLFQFATTPKVDGLKTTGGHGIPGGNRKIATCLSLSVHHSLEGETDLQKLGNKRRLSELEVTVNQILVCVWRAVV
Subjt:  ISKPTPISKAFDLFKNDIQFISKILLLFQFATTPKVDGLKTTGGHGIPGGNRKIATCLSLSVHHSLEGETDLQKLGNKRRLSELEVTVNQILVCVWRAVV

Query:  CVSCLNVLHHGRPLKIEKEGSNPGELRLWEKKASYCALGF
        CVSCLNVLHHGRPLKIEKEGSNPGELRLWEKKASYCALGF
Subjt:  CVSCLNVLHHGRPLKIEKEGSNPGELRLWEKKASYCALGF

XP_022954312.1 protein trichome birefringence-like 14 isoform X1 [Cucurbita moschata]2.4e-5093.91Show/hide
Query:  MKGGNIIMVRGGHLSIAMVVLMFTSILLWGWDKSYFASFLPLTRQQYMIPLSEYVVAVSNSSSTPKDEMVKSENKMKGRSNNTNEKEQPGKGSDYFDADS
        MKGGNIIMVRGGHLSIAMVVLMFT+ILLWGWDKSYFASFLPLTRQQYMIPLSEYVVAVSN+SSTPKDEMVKSENKMKGRSNNTNEKEQPGKGSDYFDADS
Subjt:  MKGGNIIMVRGGHLSIAMVVLMFTSILLWGWDKSYFASFLPLTRQQYMIPLSEYVVAVSNSSSTPKDEMVKSENKMKGRSNNTNEKEQPGKGSDYFDADS

Query:  ISKPTPISKAFDLFK
        ISKPTPISK  +  K
Subjt:  ISKPTPISKAFDLFK

XP_022954314.1 protein trichome birefringence-like 14 isoform X2 [Cucurbita moschata]7.2e-4791.3Show/hide
Query:  MKGGNIIMVRGGHLSIAMVVLMFTSILLWGWDKSYFASFLPLTRQQYMIPLSEYVVAVSNSSSTPKDEMVKSENKMKGRSNNTNEKEQPGKGSDYFDADS
        MKGGNIIMVRGGHLSIAMVVLMFT+ILLWGWDKSYFASFLPLTRQQYMIPLS   VAVSN+SSTPKDEMVKSENKMKGRSNNTNEKEQPGKGSDYFDADS
Subjt:  MKGGNIIMVRGGHLSIAMVVLMFTSILLWGWDKSYFASFLPLTRQQYMIPLSEYVVAVSNSSSTPKDEMVKSENKMKGRSNNTNEKEQPGKGSDYFDADS

Query:  ISKPTPISKAFDLFK
        ISKPTPISK  +  K
Subjt:  ISKPTPISKAFDLFK

XP_023548323.1 protein trichome birefringence-like 14 isoform X1 [Cucurbita pepo subsp. pepo]1.2e-4993.04Show/hide
Query:  MKGGNIIMVRGGHLSIAMVVLMFTSILLWGWDKSYFASFLPLTRQQYMIPLSEYVVAVSNSSSTPKDEMVKSENKMKGRSNNTNEKEQPGKGSDYFDADS
        MKGGNII V+GGHLSIAMVVLMFT+ILLWGWDKSYFASFLPLTRQQYMIPLSEYVVAVSNSSSTPKDEMVKSENKMKGRSNNTNEKEQPGKGSDYFDADS
Subjt:  MKGGNIIMVRGGHLSIAMVVLMFTSILLWGWDKSYFASFLPLTRQQYMIPLSEYVVAVSNSSSTPKDEMVKSENKMKGRSNNTNEKEQPGKGSDYFDADS

Query:  ISKPTPISKAFDLFK
        ISKPTPISK  +  K
Subjt:  ISKPTPISKAFDLFK

TrEMBL top hitse value%identityAlignment
A0A6J1GQN9 protein trichome birefringence-like 14 isoform X11.2e-5093.91Show/hide
Query:  MKGGNIIMVRGGHLSIAMVVLMFTSILLWGWDKSYFASFLPLTRQQYMIPLSEYVVAVSNSSSTPKDEMVKSENKMKGRSNNTNEKEQPGKGSDYFDADS
        MKGGNIIMVRGGHLSIAMVVLMFT+ILLWGWDKSYFASFLPLTRQQYMIPLSEYVVAVSN+SSTPKDEMVKSENKMKGRSNNTNEKEQPGKGSDYFDADS
Subjt:  MKGGNIIMVRGGHLSIAMVVLMFTSILLWGWDKSYFASFLPLTRQQYMIPLSEYVVAVSNSSSTPKDEMVKSENKMKGRSNNTNEKEQPGKGSDYFDADS

Query:  ISKPTPISKAFDLFK
        ISKPTPISK  +  K
Subjt:  ISKPTPISKAFDLFK

A0A6J1GS35 protein trichome birefringence-like 14 isoform X37.8e-4798.06Show/hide
Query:  MKGGNIIMVRGGHLSIAMVVLMFTSILLWGWDKSYFASFLPLTRQQYMIPLSEYVVAVSNSSSTPKDEMVKSENKMKGRSNNTNEKEQPGKGSDYFDADS
        MKGGNIIMVRGGHLSIAMVVLMFT+ILLWGWDKSYFASFLPLTRQQYMIPLSEYVVAVSN+SSTPKDEMVKSENKMKGRSNNTNEKEQPGKGSDYFDADS
Subjt:  MKGGNIIMVRGGHLSIAMVVLMFTSILLWGWDKSYFASFLPLTRQQYMIPLSEYVVAVSNSSSTPKDEMVKSENKMKGRSNNTNEKEQPGKGSDYFDADS

Query:  ISK
        ISK
Subjt:  ISK

A0A6J1GSM2 protein trichome birefringence-like 14 isoform X23.5e-4791.3Show/hide
Query:  MKGGNIIMVRGGHLSIAMVVLMFTSILLWGWDKSYFASFLPLTRQQYMIPLSEYVVAVSNSSSTPKDEMVKSENKMKGRSNNTNEKEQPGKGSDYFDADS
        MKGGNIIMVRGGHLSIAMVVLMFT+ILLWGWDKSYFASFLPLTRQQYMIPLS   VAVSN+SSTPKDEMVKSENKMKGRSNNTNEKEQPGKGSDYFDADS
Subjt:  MKGGNIIMVRGGHLSIAMVVLMFTSILLWGWDKSYFASFLPLTRQQYMIPLSEYVVAVSNSSSTPKDEMVKSENKMKGRSNNTNEKEQPGKGSDYFDADS

Query:  ISKPTPISKAFDLFK
        ISKPTPISK  +  K
Subjt:  ISKPTPISKAFDLFK

A0A6J1JS22 protein trichome birefringence-like 14 isoform X33.3e-3783.96Show/hide
Query:  MKGGNIIMVRGGHLSIAMVVLMFTSILLWGWDKSYFASFLPLTRQQYMIPLSEYVVAVSNSSST---PKDEMVKSENKMKGRSNNTNEKEQPGKGSDYFD
        MKGGNII VRGGHLSIA+VVLMFT+ILLW WDKSYFASFLPLTRQQYMIPLSEYVV V+NSSST   PKDE+  SE+KMK RSNN +EKEQPGKGSDY D
Subjt:  MKGGNIIMVRGGHLSIAMVVLMFTSILLWGWDKSYFASFLPLTRQQYMIPLSEYVVAVSNSSST---PKDEMVKSENKMKGRSNNTNEKEQPGKGSDYFD

Query:  ADSISK
        ADSISK
Subjt:  ADSISK

A0A6J1JW29 protein trichome birefringence-like 14 isoform X13.9e-3881.98Show/hide
Query:  MKGGNIIMVRGGHLSIAMVVLMFTSILLWGWDKSYFASFLPLTRQQYMIPLSEYVVAVSNSSST---PKDEMVKSENKMKGRSNNTNEKEQPGKGSDYFD
        MKGGNII VRGGHLSIA+VVLMFT+ILLW WDKSYFASFLPLTRQQYMIPLSEYVV V+NSSST   PKDE+  SE+KMK RSNN +EKEQPGKGSDY D
Subjt:  MKGGNIIMVRGGHLSIAMVVLMFTSILLWGWDKSYFASFLPLTRQQYMIPLSEYVVAVSNSSST---PKDEMVKSENKMKGRSNNTNEKEQPGKGSDYFD

Query:  ADSISKPTPIS
        ADSISK T +S
Subjt:  ADSISKPTPIS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGGGGGGAACATCATCATGGTGAGGGGGGGACATCTTTCCATTGCCATGGTTGTTCTTATGTTTACAAGCATATTGTTATGGGGTTGGGATAAAAGCTATTTTGC
TAGTTTTCTTCCACTGACAAGACAGCAGTATATGATACCACTTTCAGAATATGTAGTGGCCGTGTCAAATAGTTCCTCAACACCAAAGGATGAAATGGTTAAGTCAGAGA
ACAAAATGAAGGGAAGAAGTAATAATACCAATGAAAAAGAACAACCAGGAAAAGGTTCAGACTACTTTGATGCTGATTCTATCTCCAAGCCTACTCCTATCTCCAAAGCT
TTTGATCTGTTTAAAAATGATATCCAGTTCATATCTAAGATATTGCTGCTCTTTCAGTTTGCAACTACGCCAAAGGTAGATGGGTTGAAGACAACAGGCGGCCATGGTAT
TCCGGGTGGCAACCGGAAAATTGCTACATGCCTGAGTTTGAGCGTTCATCATTCCTTAGAAGGCGAGACAGATTTGCAGAAACTGGGAAATAAGAGACGATTATCGGAGC
TTGAGGTGACTGTGAATCAGATTTTGGTTTGTGTTTGGAGGGCTGTTGTTTGTGTTTCATGTTTGAATGTTCTTCACCATGGGAGACCTTTGAAGATAGAGAAGGAAGGA
AGCAACCCAGGAGAGCTGAGACTATGGGAGAAGAAGGCATCTTATTGCGCTTTGGGCTTTTAG
mRNA sequenceShow/hide mRNA sequence
TACTTCGGATCTAATCATTTTGAGAGGAGAGCTCTGTAGTTCTCTCTGAAAATCGAAAATGCCTCAGATTTTCTCCTAAGAAACAGCGTCAGTATCTGAATCTCCCAGTT
TCCCTCATTTGGATGTATAGAGAGGCATATGTTGTCTATCAAATGAGGGAACATTTTCAATTCATGTGATATAAGCAAGAGATGAAAGGGGGGAACATCATCATGGTGAG
GGGGGGACATCTTTCCATTGCCATGGTTGTTCTTATGTTTACAAGCATATTGTTATGGGGTTGGGATAAAAGCTATTTTGCTAGTTTTCTTCCACTGACAAGACAGCAGT
ATATGATACCACTTTCAGAATATGTAGTGGCCGTGTCAAATAGTTCCTCAACACCAAAGGATGAAATGGTTAAGTCAGAGAACAAAATGAAGGGAAGAAGTAATAATACC
AATGAAAAAGAACAACCAGGAAAAGGTTCAGACTACTTTGATGCTGATTCTATCTCCAAGCCTACTCCTATCTCCAAAGCTTTTGATCTGTTTAAAAATGATATCCAGTT
CATATCTAAGATATTGCTGCTCTTTCAGTTTGCAACTACGCCAAAGGTAGATGGGTTGAAGACAACAGGCGGCCATGGTATTCCGGGTGGCAACCGGAAAATTGCTACAT
GCCTGAGTTTGAGCGTTCATCATTCCTTAGAAGGCGAGACAGATTTGCAGAAACTGGGAAATAAGAGACGATTATCGGAGCTTGAGGTGACTGTGAATCAGATTTTGGTT
TGTGTTTGGAGGGCTGTTGTTTGTGTTTCATGTTTGAATGTTCTTCACCATGGGAGACCTTTGAAGATAGAGAAGGAAGGAAGCAACCCAGGAGAGCTGAGACTATGGGA
GAAGAAGGCATCTTATTGCGCTTTGGGCTTTTAG
Protein sequenceShow/hide protein sequence
MKGGNIIMVRGGHLSIAMVVLMFTSILLWGWDKSYFASFLPLTRQQYMIPLSEYVVAVSNSSSTPKDEMVKSENKMKGRSNNTNEKEQPGKGSDYFDADSISKPTPISKA
FDLFKNDIQFISKILLLFQFATTPKVDGLKTTGGHGIPGGNRKIATCLSLSVHHSLEGETDLQKLGNKRRLSELEVTVNQILVCVWRAVVCVSCLNVLHHGRPLKIEKEG
SNPGELRLWEKKASYCALGF