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Carg18714 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18714
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionVPS54 isoform 1
Genome locationCarg_Chr17:7325338..7326214
RNA-Seq ExpressionCarg18714
SyntenyCarg18714
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575654.1 hypothetical protein SDJN03_26293, partial [Cucurbita argyrosperma subsp. sororia]8.1e-59100Show/hide
Query:  MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTKEFENNDHKSLKQLINGEGKTEIGSDERNGERNSLGKHFSEEEINGLQIVKKQHEDGLH
        MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTKEFENNDHKSLKQLINGEGKTEIGSDERNGERNSLGKHFSEEEINGLQIVKKQHEDGLH
Subjt:  MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTKEFENNDHKSLKQLINGEGKTEIGSDERNGERNSLGKHFSEEEINGLQIVKKQHEDGLH

Query:  GVKLKKVVGKFLRNLIKGDG
        GVKLKKVVGKFLRNLIKGDG
Subjt:  GVKLKKVVGKFLRNLIKGDG

KAG7014203.1 hypothetical protein SDJN02_24378, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-98100Show/hide
Query:  MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTKEFENNDHKSLKQLINGEGKTEIGSDERNGERNSLGKHFSEEEINGLQIVKKQHEDGLH
        MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTKEFENNDHKSLKQLINGEGKTEIGSDERNGERNSLGKHFSEEEINGLQIVKKQHEDGLH
Subjt:  MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTKEFENNDHKSLKQLINGEGKTEIGSDERNGERNSLGKHFSEEEINGLQIVKKQHEDGLH

Query:  GVKLKKVVGKFLRNLIKGDGASMGWEATLQRPEPVFNEVRAGLRPTEVYGGERTGWDAILGQFTTKKGPYYHHKKPKRLSI
        GVKLKKVVGKFLRNLIKGDGASMGWEATLQRPEPVFNEVRAGLRPTEVYGGERTGWDAILGQFTTKKGPYYHHKKPKRLSI
Subjt:  GVKLKKVVGKFLRNLIKGDGASMGWEATLQRPEPVFNEVRAGLRPTEVYGGERTGWDAILGQFTTKKGPYYHHKKPKRLSI

XP_022953919.1 uncharacterized protein LOC111456324 [Cucurbita moschata]4.0e-5899.17Show/hide
Query:  MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTKEFENNDHKSLKQLINGEGKTEIGSDERNGERNSLGKHFSEEEINGLQIVKKQHEDGLH
        MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTKEFENNDHKSLKQLINGEGKTEIGSDERNGERNSLGKHFSEEEIN LQIVKKQHEDGLH
Subjt:  MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTKEFENNDHKSLKQLINGEGKTEIGSDERNGERNSLGKHFSEEEINGLQIVKKQHEDGLH

Query:  GVKLKKVVGKFLRNLIKGDG
        GVKLKKVVGKFLRNLIKGDG
Subjt:  GVKLKKVVGKFLRNLIKGDG

XP_022991938.1 uncharacterized protein LOC111488430 [Cucurbita maxima]2.3e-5394.92Show/hide
Query:  MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTKEFENNDHKSLKQLINGEGKTEIGSDERNGERNSLGKHFSEEEINGLQIVKKQHEDGLH
        MSHKRHYDISMSKRTRKPAKIQDEIQTGT NNDDQYE+FGTK FENNDHKSLKQLINGEGKTEIGSDERN +RNSLGKHFSEEEINGLQIVKKQHEDGL 
Subjt:  MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTKEFENNDHKSLKQLINGEGKTEIGSDERNGERNSLGKHFSEEEINGLQIVKKQHEDGLH

Query:  GVKLKKVVGKFLRNLIKG
        GVKLKKVVGKFLRNLIKG
Subjt:  GVKLKKVVGKFLRNLIKG

XP_023549383.1 uncharacterized protein LOC111807744 [Cucurbita pepo subsp. pepo]1.2e-5495Show/hide
Query:  MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTKEFENNDHKSLKQLINGEGKTEIGSDERNGERNSLGKHFSEEEINGLQIVKKQHEDGLH
        MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTK FENNDHKSLKQLINGEGK EIGSDERNGERNSLGKHFSEEEIN LQIVKKQHEDGL 
Subjt:  MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTKEFENNDHKSLKQLINGEGKTEIGSDERNGERNSLGKHFSEEEINGLQIVKKQHEDGLH

Query:  GVKLKKVVGKFLRNLIKGDG
        GVKLKK+VGKFLRNLIKG G
Subjt:  GVKLKKVVGKFLRNLIKGDG

TrEMBL top hitse value%identityAlignment
A0A0A0KBK8 Uncharacterized protein2.5e-3775.21Show/hide
Query:  MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQ-YERFGTKEFENNDHKSLKQLINGEGKTEIGSDERNGERNSLGKHFSEEEINGLQIVKKQHEDGL
        +SHK+HYDISMSKRTRKPAKIQDE+Q   +N+DD      G +   NNDHKSLKQLI+GEGK EI SDE N ERNSLG+HFS+EEIN LQIVKKQH+DGL
Subjt:  MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQ-YERFGTKEFENNDHKSLKQLINGEGKTEIGSDERNGERNSLGKHFSEEEINGLQIVKKQHEDGL

Query:  HGVKLKKVVGKFLRNLIKGDG
         GVKLKKVVGKFLRNLIKG G
Subjt:  HGVKLKKVVGKFLRNLIKGDG

A0A1S3CFF2 uncharacterized protein LOC1034998741.6e-3673.55Show/hide
Query:  MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDD-QYERFGTKEFENNDHKSLKQLINGEGKTEIGSDERNGERNSLGKHFSEEEINGLQIVKKQHEDGL
        +SHK+HYDISMSKRTRKPAKIQDE+Q  TS +D       G +   NNDHKSLKQLI+GEGK E   DE N ERNSLG+HFS+EEIN LQIVKKQH+DGL
Subjt:  MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDD-QYERFGTKEFENNDHKSLKQLINGEGKTEIGSDERNGERNSLGKHFSEEEINGLQIVKKQHEDGL

Query:  HGVKLKKVVGKFLRNLIKGDG
         GVKLKKVVGKFLRNLIKG G
Subjt:  HGVKLKKVVGKFLRNLIKGDG

A0A5A7US55 Uncharacterized protein1.6e-3673.55Show/hide
Query:  MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDD-QYERFGTKEFENNDHKSLKQLINGEGKTEIGSDERNGERNSLGKHFSEEEINGLQIVKKQHEDGL
        +SHK+HYDISMSKRTRKPAKIQDE+Q  TS +D       G +   NNDHKSLKQLI+GEGK E   DE N ERNSLG+HFS+EEIN LQIVKKQH+DGL
Subjt:  MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDD-QYERFGTKEFENNDHKSLKQLINGEGKTEIGSDERNGERNSLGKHFSEEEINGLQIVKKQHEDGL

Query:  HGVKLKKVVGKFLRNLIKGDG
         GVKLKKVVGKFLRNLIKG G
Subjt:  HGVKLKKVVGKFLRNLIKGDG

A0A6J1GRB0 uncharacterized protein LOC1114563241.9e-5899.17Show/hide
Query:  MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTKEFENNDHKSLKQLINGEGKTEIGSDERNGERNSLGKHFSEEEINGLQIVKKQHEDGLH
        MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTKEFENNDHKSLKQLINGEGKTEIGSDERNGERNSLGKHFSEEEIN LQIVKKQHEDGLH
Subjt:  MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTKEFENNDHKSLKQLINGEGKTEIGSDERNGERNSLGKHFSEEEINGLQIVKKQHEDGLH

Query:  GVKLKKVVGKFLRNLIKGDG
        GVKLKKVVGKFLRNLIKGDG
Subjt:  GVKLKKVVGKFLRNLIKGDG

A0A6J1JXP3 uncharacterized protein LOC1114884301.1e-5394.92Show/hide
Query:  MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTKEFENNDHKSLKQLINGEGKTEIGSDERNGERNSLGKHFSEEEINGLQIVKKQHEDGLH
        MSHKRHYDISMSKRTRKPAKIQDEIQTGT NNDDQYE+FGTK FENNDHKSLKQLINGEGKTEIGSDERN +RNSLGKHFSEEEINGLQIVKKQHEDGL 
Subjt:  MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTKEFENNDHKSLKQLINGEGKTEIGSDERNGERNSLGKHFSEEEINGLQIVKKQHEDGLH

Query:  GVKLKKVVGKFLRNLIKG
        GVKLKKVVGKFLRNLIKG
Subjt:  GVKLKKVVGKFLRNLIKG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCATAAACGCCATTATGATATCTCCATGTCAAAGAGAACAAGAAAGCCAGCCAAAATCCAAGATGAGATTCAAACCGGCACATCGAACAATGACGATCAATACGA
GAGGTTTGGCACAAAAGAGTTCGAGAACAACGACCATAAAAGCTTAAAACAGCTCATCAATGGGGAAGGAAAAACGGAAATAGGGTCGGACGAGAGGAACGGAGAAAGGA
ACTCGCTCGGAAAACACTTTAGTGAGGAAGAGATCAACGGTCTTCAAATTGTGAAGAAACAACATGAAGATGGACTACATGGAGTGAAGCTCAAAAAAGTTGTCGGAAAA
TTTTTGAGAAATTTGATCAAAGGTGATGGTGCGAGCATGGGTTGGGAGGCAACGCTACAACGTCCTGAGCCCGTGTTTAATGAGGTTCGTGCTGGTCTCCGCCCAACCGA
AGTGTACGGGGGAGAGCGCACGGGTTGGGATGCAATTTTGGGCCAATTCACGACAAAGAAAGGCCCATATTATCATCACAAGAAGCCCAAAAGGCTATCTATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCATAAACGCCATTATGATATCTCCATGTCAAAGAGAACAAGAAAGCCAGCCAAAATCCAAGATGAGATTCAAACCGGCACATCGAACAATGACGATCAATACGA
GAGGTTTGGCACAAAAGAGTTCGAGAACAACGACCATAAAAGCTTAAAACAGCTCATCAATGGGGAAGGAAAAACGGAAATAGGGTCGGACGAGAGGAACGGAGAAAGGA
ACTCGCTCGGAAAACACTTTAGTGAGGAAGAGATCAACGGTCTTCAAATTGTGAAGAAACAACATGAAGATGGACTACATGGAGTGAAGCTCAAAAAAGTTGTCGGAAAA
TTTTTGAGAAATTTGATCAAAGGTGATGGTGCGAGCATGGGTTGGGAGGCAACGCTACAACGTCCTGAGCCCGTGTTTAATGAGGTTCGTGCTGGTCTCCGCCCAACCGA
AGTGTACGGGGGAGAGCGCACGGGTTGGGATGCAATTTTGGGCCAATTCACGACAAAGAAAGGCCCATATTATCATCACAAGAAGCCCAAAAGGCTATCTATCTAA
Protein sequenceShow/hide protein sequence
MSHKRHYDISMSKRTRKPAKIQDEIQTGTSNNDDQYERFGTKEFENNDHKSLKQLINGEGKTEIGSDERNGERNSLGKHFSEEEINGLQIVKKQHEDGLHGVKLKKVVGK
FLRNLIKGDGASMGWEATLQRPEPVFNEVRAGLRPTEVYGGERTGWDAILGQFTTKKGPYYHHKKPKRLSI