; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg18716 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18716
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionProtein UPSTREAM OF FLC isoform X1
Genome locationCarg_Chr17:7317711..7319945
RNA-Seq ExpressionCarg18716
SyntenyCarg18716
Gene Ontology termsGO:0051258 - protein polymerization (biological process)
GO:0005886 - plasma membrane (cellular component)
InterPro domainsIPR010369 - Protein SOSEKI


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575652.1 hypothetical protein SDJN03_26291, partial [Cucurbita argyrosperma subsp. sororia]5.6e-11896.14Show/hide
Query:  MEADNGGDVRRVDIIYFLGRMGHVDQPHLIRLHHLAAAVACGVYLRGNTQPAFTKSKSYSTGASTSNMLRQWITCRAVDANDAVLINNLSPKASPNPPPL
        MEADNGGDVRRVDIIYFLGRMGHVDQPHLIRLHHLAAA  CGVYLRGNTQPAFTKSKSYSTGASTSNMLRQWITCRAVDANDAVLINNLSPKASPNPPPL
Subjt:  MEADNGGDVRRVDIIYFLGRMGHVDQPHLIRLHHLAAAVACGVYLRGNTQPAFTKSKSYSTGASTSNMLRQWITCRAVDANDAVLINNLSPKASPNPPPL

Query:  EKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKSFDDSRKKRQKESGGRKAAAAPIYKPMAGPNCS-------PEKMHSHMKSCRGLRSL
        EKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKSFDDSRKKRQKESGGRKAAAAPIYKPMAGPNCS       PEKMHSHMKSCRGLRSL
Subjt:  EKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKSFDDSRKKRQKESGGRKAAAAPIYKPMAGPNCS-------PEKMHSHMKSCRGLRSL

Query:  TKTASTSNKTTSSKSTTTPTSDKDSASTYLLTH
        TKTASTSNKTTSSKSTTTPTSDKDSASTYLLTH
Subjt:  TKTASTSNKTTSSKSTTTPTSDKDSASTYLLTH

KAG7014201.1 hypothetical protein SDJN02_24376, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-122100Show/hide
Query:  MEADNGGDVRRVDIIYFLGRMGHVDQPHLIRLHHLAAAVACGVYLRGNTQPAFTKSKSYSTGASTSNMLRQWITCRAVDANDAVLINNLSPKASPNPPPL
        MEADNGGDVRRVDIIYFLGRMGHVDQPHLIRLHHLAAAVACGVYLRGNTQPAFTKSKSYSTGASTSNMLRQWITCRAVDANDAVLINNLSPKASPNPPPL
Subjt:  MEADNGGDVRRVDIIYFLGRMGHVDQPHLIRLHHLAAAVACGVYLRGNTQPAFTKSKSYSTGASTSNMLRQWITCRAVDANDAVLINNLSPKASPNPPPL

Query:  EKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKSFDDSRKKRQKESGGRKAAAAPIYKPMAGPNCSPEKMHSHMKSCRGLRSLTKTASTS
        EKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKSFDDSRKKRQKESGGRKAAAAPIYKPMAGPNCSPEKMHSHMKSCRGLRSLTKTASTS
Subjt:  EKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKSFDDSRKKRQKESGGRKAAAAPIYKPMAGPNCSPEKMHSHMKSCRGLRSLTKTASTS

Query:  NKTTSSKSTTTPTSDKDSASTYLLTH
        NKTTSSKSTTTPTSDKDSASTYLLTH
Subjt:  NKTTSSKSTTTPTSDKDSASTYLLTH

XP_022953921.1 uncharacterized protein LOC111456325 [Cucurbita moschata]5.5e-11394.71Show/hide
Query:  GDVRRVDIIYFLGRMGHVDQPHLIRLHHLAAAVACGVYLRGNTQPAFTKSKSYSTGASTSNMLRQWITCRAVDANDAVLINNLSPKASPNPPPLEKSINA
        GDVRRVDIIYFLGRMGHV QPHLIRLHHLAAA ACGVYLRGNTQPAFTKSKSYS+GASTSNMLRQWITCRAVDANDAVLINNLSPKASPNPP LEKS NA
Subjt:  GDVRRVDIIYFLGRMGHVDQPHLIRLHHLAAAVACGVYLRGNTQPAFTKSKSYSTGASTSNMLRQWITCRAVDANDAVLINNLSPKASPNPPPLEKSINA

Query:  AVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKSFDDSRKKRQKESGGRKAAAAPIYKPMAGPNCS-------PEKMHSHMKSCRGLRSLTKTAST
        AVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKSFDDSRKKRQKESGGRKAAAAPIYKPMAGPNCS       PEKMHSHMKSCRGLRSLTKTAST
Subjt:  AVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKSFDDSRKKRQKESGGRKAAAAPIYKPMAGPNCS-------PEKMHSHMKSCRGLRSLTKTAST

Query:  SNKTTSSKSTTTPTSDKDSASTYLLTH
        SNKTTSSKSTTTPTSDKDSASTYLLTH
Subjt:  SNKTTSSKSTTTPTSDKDSASTYLLTH

XP_022991936.1 uncharacterized protein LOC111488428 [Cucurbita maxima]5.5e-7389.16Show/hide
Query:  MLRQWITCRAVDANDAVLINNLSPKASPNPPPLEKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKSFDDSRKKRQKESGGRKAAAAPIY
        MLRQWITCR VDANDAVLINNLSP+ASPNP P EKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKS DDSRKKRQKES GRK AA P Y
Subjt:  MLRQWITCRAVDANDAVLINNLSPKASPNPPPLEKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKSFDDSRKKRQKESGGRKAAAAPIY

Query:  KPMAGPNCS-------PEKMHSHMKSCRGLRSLTKTASTSNKTTSSKSTTTPTSDKDSASTYLLTH
        KP+AGP+CS       PEKMHSHMKSCRGLRSLTKTASTSNKTTSSKSTTTPTSDKDSASTYLLTH
Subjt:  KPMAGPNCS-------PEKMHSHMKSCRGLRSLTKTASTSNKTTSSKSTTTPTSDKDSASTYLLTH

XP_023548453.1 uncharacterized protein LOC111807110 [Cucurbita pepo subsp. pepo]4.6e-11291.85Show/hide
Query:  MEADNGGDVRRVDIIYFLGRMGHVDQPHLIRLHHLAAAVACGVYLRGNTQPAFTKSKSYSTGASTSNMLRQWITCRAVDANDAVLINNLSPKASPNPPPL
        ME DNGGDVRRVDIIYFLGRMGHV+QPHLIR+HHLAAA  CGVYLRGNTQPAFTKSKSYSTGASTSNMLRQWITCRAVDANDAVLINNLSPKASPNPPPL
Subjt:  MEADNGGDVRRVDIIYFLGRMGHVDQPHLIRLHHLAAAVACGVYLRGNTQPAFTKSKSYSTGASTSNMLRQWITCRAVDANDAVLINNLSPKASPNPPPL

Query:  EKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKSFDDSRKKRQKESGGRKAAAAPIYKPMAGPNCS-------PEKMHSHMKSCRGLRSL
        EKSINAAVFCRDD+FG SARVPRNSWDGNLQIRRHYSHPSFRKSFD SRKKRQKESG RKAA AP YKPMAGPNCS       PEKMHSHMKSCRGLRSL
Subjt:  EKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKSFDDSRKKRQKESGGRKAAAAPIYKPMAGPNCS-------PEKMHSHMKSCRGLRSL

Query:  TKTASTSNKTTSSKSTTTPTSDKDSASTYLLTH
        TKTASTSNKTTSS STTTPTSDKDSASTYLLTH
Subjt:  TKTASTSNKTTSSKSTTTPTSDKDSASTYLLTH

TrEMBL top hitse value%identityAlignment
A0A5D3CFC8 Protein UPSTREAM OF FLC isoform X16.8e-5349.04Show/hide
Query:  MEADN---GGDVRRVDIIYFLGRMGHVDQPHLIRLHHLAAAVACGVYLR---------------------------------------------------
        MEA+N   GG++R+V IIYFL RMGHV+QPHLIR+HHLA A + GVYLR                                                   
Subjt:  MEADN---GGDVRRVDIIYFLGRMGHVDQPHLIRLHHLAAAVACGVYLR---------------------------------------------------

Query:  ----------------------GNTQPAFTKSKSYSTGASTSNMLRQWITC--RAVDANDAVLINNLSPKASPNPPPLEKSINAAVFCRDDEFGGSARVP
                               ++QPAFTKSKSYS+GA  S++ RQ ITC   AVD ND VL+ N SPK     PPLEK  N AV CRD+  GGSARV 
Subjt:  ----------------------GNTQPAFTKSKSYSTGASTSNMLRQWITC--RAVDANDAVLINNLSPKASPNPPPLEKSINAAVFCRDDEFGGSARVP

Query:  RNSWD-GNLQIRRHYSHPSFRKSFDDSRKKRQKESGGRKAAAAPIYKPMAGPNCS-------PEKMHSHMKSCRGLRSLTK-TASTSNKTTSSKSTTTPT
         +SWD GNL+IRR  S    R S DD RKKR KE+G  K  AA  YKPMAGPNCS       PEKMHSHMKSCRG++SLTK   +TS+KTT SKSTTT T
Subjt:  RNSWD-GNLQIRRHYSHPSFRKSFDDSRKKRQKESGGRKAAAAPIYKPMAGPNCS-------PEKMHSHMKSCRGLRSLTK-TASTSNKTTSSKSTTTPT

Query:  SDKDSASTYLLT
        SDKD  STY+LT
Subjt:  SDKDSASTYLLT

A0A6J1CV58 protein UPSTREAM OF FLC isoform X17.9e-0970Show/hide
Query:  MEADN-GGDVRRVDIIYFLGRMGHVDQPHLIRLHHLAAAVA---CGVYLR
        MEA+N GG++RRV I+YFL RMGHV+QPHLIR+HHLAAA A    GV+LR
Subjt:  MEADN-GGDVRRVDIIYFLGRMGHVDQPHLIRLHHLAAAVA---CGVYLR

A0A6J1GPF9 uncharacterized protein LOC1114563252.6e-11394.71Show/hide
Query:  GDVRRVDIIYFLGRMGHVDQPHLIRLHHLAAAVACGVYLRGNTQPAFTKSKSYSTGASTSNMLRQWITCRAVDANDAVLINNLSPKASPNPPPLEKSINA
        GDVRRVDIIYFLGRMGHV QPHLIRLHHLAAA ACGVYLRGNTQPAFTKSKSYS+GASTSNMLRQWITCRAVDANDAVLINNLSPKASPNPP LEKS NA
Subjt:  GDVRRVDIIYFLGRMGHVDQPHLIRLHHLAAAVACGVYLRGNTQPAFTKSKSYSTGASTSNMLRQWITCRAVDANDAVLINNLSPKASPNPPPLEKSINA

Query:  AVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKSFDDSRKKRQKESGGRKAAAAPIYKPMAGPNCS-------PEKMHSHMKSCRGLRSLTKTAST
        AVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKSFDDSRKKRQKESGGRKAAAAPIYKPMAGPNCS       PEKMHSHMKSCRGLRSLTKTAST
Subjt:  AVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKSFDDSRKKRQKESGGRKAAAAPIYKPMAGPNCS-------PEKMHSHMKSCRGLRSLTKTAST

Query:  SNKTTSSKSTTTPTSDKDSASTYLLTH
        SNKTTSSKSTTTPTSDKDSASTYLLTH
Subjt:  SNKTTSSKSTTTPTSDKDSASTYLLTH

A0A6J1H7K3 protein UPSTREAM OF FLC-like5.4e-5066.85Show/hide
Query:  QPAFTKSKSYSTGASTSNMLRQWITCRAVDANDAVLINNLSPKASPNPPPLEKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKSFDDSR
        Q AFTKSKSYS+GAST  MLRQWITC A+D +D+VLI N SPK S     LEK  N AVFCRDDE GGSARV RNSWDGNL++   +S  + RKS DDSR
Subjt:  QPAFTKSKSYSTGASTSNMLRQWITCRAVDANDAVLINNLSPKASPNPPPLEKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKSFDDSR

Query:  KKRQKESGGRKAAAAPIYKPMAGPNCS-------PEKMHSHMKSCRGLRSLTKTASTSNKTTSSKSTTTPTSDKDSASTYLLTH
        KKRQKESGG K A    +KPMAGPNCS       PEKMHSHMKSC+GL+SLTKTA+TS   T SKSTT  +SDK+  STYLLT+
Subjt:  KKRQKESGGRKAAAAPIYKPMAGPNCS-------PEKMHSHMKSCRGLRSLTKTASTSNKTTSSKSTTTPTSDKDSASTYLLTH

A0A6J1H7K3 protein UPSTREAM OF FLC-like9.1e-0565Show/hide
Query:  GDVRRVDIIYFLGRMGHVDQPHLIRLHHLAAAVACGVYLR
        G+VRR+ ++YFL RMGHV+QPHLIR+HHL      GVYLR
Subjt:  GDVRRVDIIYFLGRMGHVDQPHLIRLHHLAAAVACGVYLR

A0A6J1H7K3 protein UPSTREAM OF FLC-like7.3e-4767.05Show/hide
Query:  NTQPAFTKSKSYSTGASTSNMLRQWITCRAVDANDAVLINNLSPKASPNPPPL-EKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKSFD
        +T PAFTKSKSYS+GA  S++LRQWITC AVD ND VLI N S  A+ +PP L EK  N AV CRDD  GGSARV R+SWDG L I RH +  + RKSFD
Subjt:  NTQPAFTKSKSYSTGASTSNMLRQWITCRAVDANDAVLINNLSPKASPNPPPL-EKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKSFD

Query:  DSRKKRQKESGGRK-AAAAPIYKPMAGPNCS-------PEKMHSHMKSCRGLRSLTKTASTSNKTTSSKSTTTPTS
        + RKKR KESGGRK AAA   +K M GPNCS       PEKMH+HMKSCRGL+SL KT STSNKTTSSKSTTT TS
Subjt:  DSRKKRQKESGGRK-AAAAPIYKPMAGPNCS-------PEKMHSHMKSCRGLRSLTKTASTSNKTTSSKSTTTPTS

A0A6J1JS66 uncharacterized protein LOC1114884282.7e-7389.16Show/hide
Query:  MLRQWITCRAVDANDAVLINNLSPKASPNPPPLEKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKSFDDSRKKRQKESGGRKAAAAPIY
        MLRQWITCR VDANDAVLINNLSP+ASPNP P EKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKS DDSRKKRQKES GRK AA P Y
Subjt:  MLRQWITCRAVDANDAVLINNLSPKASPNPPPLEKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKSFDDSRKKRQKESGGRKAAAAPIY

Query:  KPMAGPNCS-------PEKMHSHMKSCRGLRSLTKTASTSNKTTSSKSTTTPTSDKDSASTYLLTH
        KP+AGP+CS       PEKMHSHMKSCRGLRSLTKTASTSNKTTSSKSTTTPTSDKDSASTYLLTH
Subjt:  KPMAGPNCS-------PEKMHSHMKSCRGLRSLTKTASTSNKTTSSKSTTTPTSDKDSASTYLLTH

SwissProt top hitse value%identityAlignment
Q9SYJ8 Protein SOSEKI 13.2e-0760.98Show/hide
Query:  GGDVRRVDIIYFLGRMGHVDQPHLIRLHHLAAAVACGVYLR
        GG+VRRV+++YFL R GHVD PHL+R+HHL+     GV+LR
Subjt:  GGDVRRVDIIYFLGRMGHVDQPHLIRLHHLAAAVACGVYLR

Q9SYJ8 Protein SOSEKI 13.9e-0532.76Show/hide
Query:  AFTKSKSYSTGASTSNMLRQWITCRAVDANDAVLINNLSPKASPNPPPLEKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKSFDD--SR
        ++ K+KSYS+    S++LR  + C  +D NDAVL+            PL KS       R   FG        +W+   + + H  H + RKSF+   S 
Subjt:  AFTKSKSYSTGASTSNMLRQWITCRAVDANDAVLINNLSPKASPNPPPLEKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKSFDD--SR

Query:  KKRQKESGGRKAAAAPIYKPMAGPNCS-------PEKMHSHMKSCRGLRSLTKTASTSNKTTSSKSTTTPTSDK
         K ++     K   AP  KP   P CS       PEKMHSHMK CRG+    K +S +N   +S +T  P   +
Subjt:  KKRQKESGGRKAAAAPIYKPMAGPNCS-------PEKMHSHMKSCRGLRSLTKTASTSNKTTSSKSTTTPTSDK

Arabidopsis top hitse value%identityAlignment
AT1G05577.1 Domain of unknown function (DUF966)2.3e-0860.98Show/hide
Query:  GGDVRRVDIIYFLGRMGHVDQPHLIRLHHLAAAVACGVYLR
        GG+VRRV+++YFL R GHVD PHL+R+HHL+     GV+LR
Subjt:  GGDVRRVDIIYFLGRMGHVDQPHLIRLHHLAAAVACGVYLR

AT1G05577.1 Domain of unknown function (DUF966)2.8e-0632.76Show/hide
Query:  AFTKSKSYSTGASTSNMLRQWITCRAVDANDAVLINNLSPKASPNPPPLEKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKSFDD--SR
        ++ K+KSYS+    S++LR  + C  +D NDAVL+            PL KS       R   FG        +W+   + + H  H + RKSF+   S 
Subjt:  AFTKSKSYSTGASTSNMLRQWITCRAVDANDAVLINNLSPKASPNPPPLEKSINAAVFCRDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKSFDD--SR

Query:  KKRQKESGGRKAAAAPIYKPMAGPNCS-------PEKMHSHMKSCRGLRSLTKTASTSNKTTSSKSTTTPTSDK
         K ++     K   AP  KP   P CS       PEKMHSHMK CRG+    K +S +N   +S +T  P   +
Subjt:  KKRQKESGGRKAAAAPIYKPMAGPNCS-------PEKMHSHMKSCRGLRSLTKTASTSNKTTSSKSTTTPTSDK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCTGATAATGGCGGAGATGTTAGAAGAGTTGATATTATTTACTTTCTTGGTCGGATGGGACACGTGGACCAACCCCATCTCATCCGTCTTCATCATCTCGCCGC
CGCCGTCGCCTGCGGCGTTTATCTCCGAGGTAATACCCAACCTGCATTTACAAAGAGCAAGAGCTACTCAACCGGAGCTTCCACTTCCAACATGCTTCGCCAGTGGATCA
CGTGCAGAGCAGTAGATGCAAACGACGCTGTTTTGATCAACAATCTATCTCCAAAAGCTTCACCCAATCCGCCCCCATTGGAAAAATCCATAAACGCCGCCGTGTTTTGC
AGAGACGACGAGTTCGGTGGCTCCGCCCGAGTTCCTCGGAATTCTTGGGATGGGAACCTCCAAATCCGCCGCCATTACAGCCACCCAAGTTTTCGGAAAAGCTTCGACGA
TTCAAGGAAGAAGAGGCAGAAGGAGAGCGGTGGAAGAAAGGCGGCAGCCGCCCCGATTTACAAGCCAATGGCAGGACCAAACTGCTCGCCGGAGAAGATGCATTCACACA
TGAAATCGTGTAGAGGACTCAGGTCTCTGACCAAGACTGCTTCAACGTCCAACAAAACGACATCGTCTAAGTCAACCACGACACCAACTTCCGACAAGGATTCGGCTTCC
ACCTACCTGTTGACCCACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGCTGATAATGGCGGAGATGTTAGAAGAGTTGATATTATTTACTTTCTTGGTCGGATGGGACACGTGGACCAACCCCATCTCATCCGTCTTCATCATCTCGCCGC
CGCCGTCGCCTGCGGCGTTTATCTCCGAGGTAATACCCAACCTGCATTTACAAAGAGCAAGAGCTACTCAACCGGAGCTTCCACTTCCAACATGCTTCGCCAGTGGATCA
CGTGCAGAGCAGTAGATGCAAACGACGCTGTTTTGATCAACAATCTATCTCCAAAAGCTTCACCCAATCCGCCCCCATTGGAAAAATCCATAAACGCCGCCGTGTTTTGC
AGAGACGACGAGTTCGGTGGCTCCGCCCGAGTTCCTCGGAATTCTTGGGATGGGAACCTCCAAATCCGCCGCCATTACAGCCACCCAAGTTTTCGGAAAAGCTTCGACGA
TTCAAGGAAGAAGAGGCAGAAGGAGAGCGGTGGAAGAAAGGCGGCAGCCGCCCCGATTTACAAGCCAATGGCAGGACCAAACTGCTCGCCGGAGAAGATGCATTCACACA
TGAAATCGTGTAGAGGACTCAGGTCTCTGACCAAGACTGCTTCAACGTCCAACAAAACGACATCGTCTAAGTCAACCACGACACCAACTTCCGACAAGGATTCGGCTTCC
ACCTACCTGTTGACCCACTGA
Protein sequenceShow/hide protein sequence
MEADNGGDVRRVDIIYFLGRMGHVDQPHLIRLHHLAAAVACGVYLRGNTQPAFTKSKSYSTGASTSNMLRQWITCRAVDANDAVLINNLSPKASPNPPPLEKSINAAVFC
RDDEFGGSARVPRNSWDGNLQIRRHYSHPSFRKSFDDSRKKRQKESGGRKAAAAPIYKPMAGPNCSPEKMHSHMKSCRGLRSLTKTASTSNKTTSSKSTTTPTSDKDSAS
TYLLTH