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Carg18722 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18722
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein HEADING DATE REPRESSOR 1
Genome locationCarg_Chr17:7265709..7267675
RNA-Seq ExpressionCarg18722
SyntenyCarg18722
Gene Ontology termsGO:0009909 - regulation of flower development (biological process)
InterPro domainsIPR038864 - Protein heading date repressor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575643.1 Protein HEADING DATE REPRESSOR 1, partial [Cucurbita argyrosperma subsp. sororia]1.3e-3897.78Show/hide
Query:  MERNNSGDIDRILEGFSPASSPRIQWKSHRRSGKKRKLVNADIVESMRRIAILEMNRKDRKIGRLNDQLAEVARCLEYLQLQLVQEKSKR
        MERNNSGDIDRILEGFSPASSPRIQWKS RRSGKKRKLVNADIVESMRRIAILEMNRKDRKIG LNDQLAEVARCLEYLQLQLVQEKSKR
Subjt:  MERNNSGDIDRILEGFSPASSPRIQWKSHRRSGKKRKLVNADIVESMRRIAILEMNRKDRKIGRLNDQLAEVARCLEYLQLQLVQEKSKR

KAG6593354.1 Protein HEADING DATE REPRESSOR 1, partial [Cucurbita argyrosperma subsp. sororia]8.2e-2042.35Show/hide
Query:  MERNNSGDIDRILEGFSPASSPRIQWKSHRRS--------------------------------------------------------------------
        M R+NSG +DRILEGFSPAS+PRIQWKS RRS                                                                    
Subjt:  MERNNSGDIDRILEGFSPASSPRIQWKSHRRS--------------------------------------------------------------------

Query:  ------------GKKRKLVNADIVESMRRIAILEMNRKDRKIGRLNDQLAEVARCLEYLQLQLVQEKSKR
                    GKKRKLVN D+VESMRRIAI EMNRKDR+I  LN+QL E ARCLE+LQ+QL+QEKSKR
Subjt:  ------------GKKRKLVNADIVESMRRIAILEMNRKDRKIGRLNDQLAEVARCLEYLQLQLVQEKSKR

KAG7014195.1 Protein HEADING DATE REPRESSOR 1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-40100Show/hide
Query:  MERNNSGDIDRILEGFSPASSPRIQWKSHRRSGKKRKLVNADIVESMRRIAILEMNRKDRKIGRLNDQLAEVARCLEYLQLQLVQEKSKR
        MERNNSGDIDRILEGFSPASSPRIQWKSHRRSGKKRKLVNADIVESMRRIAILEMNRKDRKIGRLNDQLAEVARCLEYLQLQLVQEKSKR
Subjt:  MERNNSGDIDRILEGFSPASSPRIQWKSHRRSGKKRKLVNADIVESMRRIAILEMNRKDRKIGRLNDQLAEVARCLEYLQLQLVQEKSKR

XP_022959741.1 protein HEADING DATE REPRESSOR 1-like isoform X2 [Cucurbita moschata]1.1e-1942.35Show/hide
Query:  MERNNSGDIDRILEGFSPASSPRIQWKSHRRS--------------------------------------------------------------------
        M R+NSG +DRILEGFSPAS+PRIQWKS RRS                                                                    
Subjt:  MERNNSGDIDRILEGFSPASSPRIQWKSHRRS--------------------------------------------------------------------

Query:  ------------GKKRKLVNADIVESMRRIAILEMNRKDRKIGRLNDQLAEVARCLEYLQLQLVQEKSKR
                    GKKRKLVN D+VESMRRIAI EMNRKDR+I  LN+QL E ARCLE+LQ+QL+QEKSKR
Subjt:  ------------GKKRKLVNADIVESMRRIAILEMNRKDRKIGRLNDQLAEVARCLEYLQLQLVQEKSKR

XP_023515206.1 protein HEADING DATE REPRESSOR 1-like [Cucurbita pepo subsp. pepo]1.7e-2042.94Show/hide
Query:  MERNNSGDIDRILEGFSPASSPRIQWKSHRRS--------------------------------------------------------------------
        M R+NSG +DRILEGFSPAS+PRIQWKS RRS                                                                    
Subjt:  MERNNSGDIDRILEGFSPASSPRIQWKSHRRS--------------------------------------------------------------------

Query:  ------------GKKRKLVNADIVESMRRIAILEMNRKDRKIGRLNDQLAEVARCLEYLQLQLVQEKSKR
                    GKKRKLVN D+VESMRRIAI EMNRKDR+IG LN+QL E ARCLE+LQ+QL+QEKSKR
Subjt:  ------------GKKRKLVNADIVESMRRIAILEMNRKDRKIGRLNDQLAEVARCLEYLQLQLVQEKSKR

TrEMBL top hitse value%identityAlignment
A0A1S3CE60 uncharacterized protein LOC1034998617.5e-1940.11Show/hide
Query:  MERNNSGDIDRILEGFSPASSPRIQWKSHRRS--------------------------------------------------------------------
        ME N+SG IDRILEGFSPAS+PRIQW S RRS                                                                    
Subjt:  MERNNSGDIDRILEGFSPASSPRIQWKSHRRS--------------------------------------------------------------------

Query:  -------------------GKKRKLVNADIVESMRRIAILEMNRKDRKIGRLNDQLAEVARCLEYLQLQLVQEKSKR
                           GKKRKLVN D+VESMRRIA+ EMNRKDR+I  LN+QL E ARCLE+LQ+QL+QEKSKR
Subjt:  -------------------GKKRKLVNADIVESMRRIAILEMNRKDRKIGRLNDQLAEVARCLEYLQLQLVQEKSKR

A0A5A7UUH2 Protein HEADING DATE REPRESSOR 1-like isoform X27.5e-1940.11Show/hide
Query:  MERNNSGDIDRILEGFSPASSPRIQWKSHRRS--------------------------------------------------------------------
        ME N+SG IDRILEGFSPAS+PRIQW S RRS                                                                    
Subjt:  MERNNSGDIDRILEGFSPASSPRIQWKSHRRS--------------------------------------------------------------------

Query:  -------------------GKKRKLVNADIVESMRRIAILEMNRKDRKIGRLNDQLAEVARCLEYLQLQLVQEKSKR
                           GKKRKLVN D+VESMRRIA+ EMNRKDR+I  LN+QL E ARCLE+LQ+QL+QEKSKR
Subjt:  -------------------GKKRKLVNADIVESMRRIAILEMNRKDRKIGRLNDQLAEVARCLEYLQLQLVQEKSKR

A0A6J1D3E7 protein HEADING DATE REPRESSOR 16.8e-2041.57Show/hide
Query:  MERNNSGDIDRILEGFSPASSPRIQWKSHRRS--------------------------------------------------------------------
        MER+NSG IDRILEGFSPAS+PRI WKS RRS                                                                    
Subjt:  MERNNSGDIDRILEGFSPASSPRIQWKSHRRS--------------------------------------------------------------------

Query:  --------------------GKKRKLVNADIVESMRRIAILEMNRKDRKIGRLNDQLAEVARCLEYLQLQLVQEKSKR
                            GKKRKLVN D+VESMRRIA+ EMNRKDR+I  LN+QL E ARCLE+LQLQLVQEKSKR
Subjt:  --------------------GKKRKLVNADIVESMRRIAILEMNRKDRKIGRLNDQLAEVARCLEYLQLQLVQEKSKR

A0A6J1H5Q2 protein HEADING DATE REPRESSOR 1-like isoform X25.2e-2042.35Show/hide
Query:  MERNNSGDIDRILEGFSPASSPRIQWKSHRRS--------------------------------------------------------------------
        M R+NSG +DRILEGFSPAS+PRIQWKS RRS                                                                    
Subjt:  MERNNSGDIDRILEGFSPASSPRIQWKSHRRS--------------------------------------------------------------------

Query:  ------------GKKRKLVNADIVESMRRIAILEMNRKDRKIGRLNDQLAEVARCLEYLQLQLVQEKSKR
                    GKKRKLVN D+VESMRRIAI EMNRKDR+I  LN+QL E ARCLE+LQ+QL+QEKSKR
Subjt:  ------------GKKRKLVNADIVESMRRIAILEMNRKDRKIGRLNDQLAEVARCLEYLQLQLVQEKSKR

A0A6J1KTY5 protein HEADING DATE REPRESSOR 12.0e-1941.76Show/hide
Query:  MERNNSGDIDRILEGFSPASSPRIQWKSHRRS--------------------------------------------------------------------
        M  +NSG +DRILEGFSPAS+PRIQWKS RRS                                                                    
Subjt:  MERNNSGDIDRILEGFSPASSPRIQWKSHRRS--------------------------------------------------------------------

Query:  ------------GKKRKLVNADIVESMRRIAILEMNRKDRKIGRLNDQLAEVARCLEYLQLQLVQEKSKR
                    GKKRKLVN D+VESMRRIAI EMNRKDR+I  LN+QL E ARCLE+LQ+QL+QEKSKR
Subjt:  ------------GKKRKLVNADIVESMRRIAILEMNRKDRKIGRLNDQLAEVARCLEYLQLQLVQEKSKR

SwissProt top hitse value%identityAlignment
B8AE37 Protein HEADING DATE REPRESSOR 13.1e-1462.67Show/hide
Query:  FSPASSPRIQWKSHRRSGKKRKLVNADIVESMRRIAILEMNRKDRKIGRLNDQLAEVARCLEYLQLQLVQEKSKR
        F PAS P+  W      GKKRKLVN D+VESMRRIAI EMNRKDR+I  LN+QL E +R LE LQ QL  E+ KR
Subjt:  FSPASSPRIQWKSHRRSGKKRKLVNADIVESMRRIAILEMNRKDRKIGRLNDQLAEVARCLEYLQLQLVQEKSKR

Q6K678 Protein HEADING DATE REPRESSOR 13.1e-1462.67Show/hide
Query:  FSPASSPRIQWKSHRRSGKKRKLVNADIVESMRRIAILEMNRKDRKIGRLNDQLAEVARCLEYLQLQLVQEKSKR
        F PAS P+  W      GKKRKLVN D+VESMRRIAI EMNRKDR+I  LN+QL E +R LE LQ QL  E+ KR
Subjt:  FSPASSPRIQWKSHRRSGKKRKLVNADIVESMRRIAILEMNRKDRKIGRLNDQLAEVARCLEYLQLQLVQEKSKR

Arabidopsis top hitse value%identityAlignment
AT1G80940.1 unknown protein6.3e-1875.86Show/hide
Query:  GKKRKLVNADIVESMRRIAILEMNRKDRKIGRLNDQLAEVARCLEYLQLQLVQEKSKR
        GKKRKLVN D+VESMRRIA+ EMNRKDR+I  LN+QL E +RCLE+LQLQL+QE+SKR
Subjt:  GKKRKLVNADIVESMRRIAILEMNRKDRKIGRLNDQLAEVARCLEYLQLQLVQEKSKR

AT1G80940.2 unknown protein1.2e-0584.62Show/hide
Query:  GKKRKLVNADIVESMRRIAILEMNRK
        GKKRKLVN D+VESMRRIA+ EMNRK
Subjt:  GKKRKLVNADIVESMRRIAILEMNRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCGCAATAATTCCGGCGACATTGATAGGATTCTGGAAGGTTTTTCTCCGGCGTCCTCTCCCCGAATTCAGTGGAAATCTCATCGGAGGTCAGGGAAGAAGCGCAA
ACTTGTCAATGCCGACATTGTCGAGAGCATGCGGAGGATTGCCATACTGGAAATGAACAGAAAGGATCGAAAAATTGGCAGGCTGAACGATCAGCTCGCCGAGGTTGCTC
GCTGCTTGGAATATCTTCAACTTCAGCTTGTACAAGAAAAGAGCAAAAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCGCAATAATTCCGGCGACATTGATAGGATTCTGGAAGGTTTTTCTCCGGCGTCCTCTCCCCGAATTCAGTGGAAATCTCATCGGAGGTCAGGGAAGAAGCGCAA
ACTTGTCAATGCCGACATTGTCGAGAGCATGCGGAGGATTGCCATACTGGAAATGAACAGAAAGGATCGAAAAATTGGCAGGCTGAACGATCAGCTCGCCGAGGTTGCTC
GCTGCTTGGAATATCTTCAACTTCAGCTTGTACAAGAAAAGAGCAAAAGATAA
Protein sequenceShow/hide protein sequence
MERNNSGDIDRILEGFSPASSPRIQWKSHRRSGKKRKLVNADIVESMRRIAILEMNRKDRKIGRLNDQLAEVARCLEYLQLQLVQEKSKR