CuGenDBv2

Gene ID	Carg18734
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein LOW PSII ACCUMULATION 3, chloroplastic
Genome location	Carg_Chr17:7189782..7194071
RNA-Seq Expression	Carg18734
Synteny	Carg18734
Gene Ontology terms	NA
InterPro domains	IPR018962 - Domain of unknown function DUF1995 IPR044687 - Protein LOW PSII ACCUMULATION 3

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6575630.1 Protein LOW PSII ACCUMULATION 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

2.4e-213

86.67

Show/hide

Query:  MAIMAFLSSPPHIPSLVRPCHRNFLFSPISSSFSALRRSTRSSLFGAQTLATSGFCFRIHCSDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA
        MAIMAFLSSPPHIPSLVRPCH NFLFSPISSSFSALRRSTRSSLFGAQTLATSGFCFRIHCSDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA
Subjt:  MAIMAFLSSPPHIPSLVRPCHRNFLFSPISSSFSALRRSTRSSLFGAQTLATSGFCFRIHCSDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA

Query:  YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPDKGRASQLFKTALDSKCGANRGHACPHNINPGLRFMCF
        YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPDKGRASQLFKTALDS                       
Subjt:  YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPDKGRASQLFKTALDSKCGANRGHACPHNINPGLRFMCF

Query:  FHLFLPFISQIDGITISSLDDVPAGPVTSFFRSIRNTLDFDFEDENAGRWTSSEPPSLYIFINCSTRELAMIEKYVNCYHAIFDGGFDVFACTPGDSFWD
                  IDGITISSLDDVPAGPVTSFFRSIRNTLDFDFEDENAGRWTSSEPPSLYIFINCSTRELAMIEKYV                        
Subjt:  FHLFLPFISQIDGITISSLDDVPAGPVTSFFRSIRNTLDFDFEDENAGRWTSSEPPSLYIFINCSTRELAMIEKYVNCYHAIFDGGFDVFACTPGDSFWD

Query:  LQETFASSIPTLMFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVPIAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRF
          ETFASSIPTLMFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVPIAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRF
Subjt:  LQETFASSIPTLMFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVPIAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRF

Query:  TLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDNDSEVSSAWRS
        TLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDNDSEVSSAWRS
Subjt:  TLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDNDSEVSSAWRS

KAG7014184.1 Protein LOW PSII ACCUMULATION 3, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]

4.0e-264

100

Show/hide

Query:  MAIMAFLSSPPHIPSLVRPCHRNFLFSPISSSFSALRRSTRSSLFGAQTLATSGFCFRIHCSDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA
        MAIMAFLSSPPHIPSLVRPCHRNFLFSPISSSFSALRRSTRSSLFGAQTLATSGFCFRIHCSDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA
Subjt:  MAIMAFLSSPPHIPSLVRPCHRNFLFSPISSSFSALRRSTRSSLFGAQTLATSGFCFRIHCSDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA

Query:  YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPDKGRASQLFKTALDSKCGANRGHACPHNINPGLRFMCF
        YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPDKGRASQLFKTALDSKCGANRGHACPHNINPGLRFMCF
Subjt:  YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPDKGRASQLFKTALDSKCGANRGHACPHNINPGLRFMCF

Query:  FHLFLPFISQIDGITISSLDDVPAGPVTSFFRSIRNTLDFDFEDENAGRWTSSEPPSLYIFINCSTRELAMIEKYVNCYHAIFDGGFDVFACTPGDSFWD
        FHLFLPFISQIDGITISSLDDVPAGPVTSFFRSIRNTLDFDFEDENAGRWTSSEPPSLYIFINCSTRELAMIEKYVNCYHAIFDGGFDVFACTPGDSFWD
Subjt:  FHLFLPFISQIDGITISSLDDVPAGPVTSFFRSIRNTLDFDFEDENAGRWTSSEPPSLYIFINCSTRELAMIEKYVNCYHAIFDGGFDVFACTPGDSFWD

Query:  LQETFASSIPTLMFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVPIAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRF
        LQETFASSIPTLMFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVPIAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRF
Subjt:  LQETFASSIPTLMFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVPIAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRF

Query:  TLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDNDSEVSSAWRS
        TLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDNDSEVSSAWRS
Subjt:  TLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDNDSEVSSAWRS

XP_022954402.1 protein LOW PSII ACCUMULATION 3, chloroplastic [Cucurbita moschata]

1.0e-211

86.22

Show/hide

Query:  MAIMAFLSSPPHIPSLVRPCHRNFLFSPISSSFSALRRSTRSSLFGAQTLATSGFCFRIHCSDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA
        MAIMAFLSSPPHIPSLVRP H NFLFSPI+SSFSALRRSTRSSLFGAQTLATSGFCFRIHCSDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA
Subjt:  MAIMAFLSSPPHIPSLVRPCHRNFLFSPISSSFSALRRSTRSSLFGAQTLATSGFCFRIHCSDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA

Query:  YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPDKGRASQLFKTALDSKCGANRGHACPHNINPGLRFMCF
        YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPDKGRASQLFKTALDS                       
Subjt:  YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPDKGRASQLFKTALDSKCGANRGHACPHNINPGLRFMCF

Query:  FHLFLPFISQIDGITISSLDDVPAGPVTSFFRSIRNTLDFDFEDENAGRWTSSEPPSLYIFINCSTRELAMIEKYVNCYHAIFDGGFDVFACTPGDSFWD
                  IDGITISSLDDVPAGPVTSFFRSIRNTLDFDFEDENAGRWTSSEPPSLYIFINCSTRELAMIEKYV                        
Subjt:  FHLFLPFISQIDGITISSLDDVPAGPVTSFFRSIRNTLDFDFEDENAGRWTSSEPPSLYIFINCSTRELAMIEKYVNCYHAIFDGGFDVFACTPGDSFWD

Query:  LQETFASSIPTLMFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVPIAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRF
          ETFASSIPTLMFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVPIAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRF
Subjt:  LQETFASSIPTLMFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVPIAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRF

Query:  TLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDNDSEVSSAWRS
        TLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDNDSEVSSAWRS
Subjt:  TLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDNDSEVSSAWRS

XP_022992481.1 protein LOW PSII ACCUMULATION 3, chloroplastic [Cucurbita maxima]

1.7e-211

Show/hide

Query:  MAIMAFLSSPPHIPSLVRPCHRNFLFSPISSSFSALRRSTRSSLFGAQTLATSGFCFRIHCSDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA
        MAIMAFLSSPPHIPSLVRP H NFLFSPISSSFSALRRSTRSSLFGAQTLATSGFCFRIHCSDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA
Subjt:  MAIMAFLSSPPHIPSLVRPCHRNFLFSPISSSFSALRRSTRSSLFGAQTLATSGFCFRIHCSDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA

Query:  YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPDKGRASQLFKTALDSKCGANRGHACPHNINPGLRFMCF
        YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPDKGRASQLFKTALDS                       
Subjt:  YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPDKGRASQLFKTALDSKCGANRGHACPHNINPGLRFMCF

Query:  FHLFLPFISQIDGITISSLDDVPAGPVTSFFRSIRNTLDFDFEDENAGRWTSSEPPSLYIFINCSTRELAMIEKYVNCYHAIFDGGFDVFACTPGDSFWD
                  IDGITISSLDD+PAGPVTSFFRSIRNTLDFDFEDENAGRWTSSEPPSLYIFINCSTRELAMIEKYV                        
Subjt:  FHLFLPFISQIDGITISSLDDVPAGPVTSFFRSIRNTLDFDFEDENAGRWTSSEPPSLYIFINCSTRELAMIEKYVNCYHAIFDGGFDVFACTPGDSFWD

Query:  LQETFASSIPTLMFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVPIAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRF
          ETFASSIPTLMFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVPIAPYIVNYSGALFRQYPGPWQVMLKQ DNSYACVAESETRF
Subjt:  LQETFASSIPTLMFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVPIAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRF

Query:  TLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDNDSEVSSAWRS
        TLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDNDSEVSSAWRS
Subjt:  TLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDNDSEVSSAWRS

XP_023547388.1 protein LOW PSII ACCUMULATION 3, chloroplastic [Cucurbita pepo subsp. pepo]

6.6e-211

85.78

Show/hide

Query:  MAIMAFLSSPPHIPSLVRPCHRNFLFSPISSSFSALRRSTRSSLFGAQTLATSGFCFRIHCSDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA
        MAIMAFLSSPPHIPSLVRP H NFLFSPISSSFSALRRSTRSSLFGAQTLATSGFCFRIHCSDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA
Subjt:  MAIMAFLSSPPHIPSLVRPCHRNFLFSPISSSFSALRRSTRSSLFGAQTLATSGFCFRIHCSDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA

Query:  YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPDKGRASQLFKTALDSKCGANRGHACPHNINPGLRFMCF
        YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQL+LAVARNLQEKRGTRSCIVFPDKPDKGRASQLFKTALDS                       
Subjt:  YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPDKGRASQLFKTALDSKCGANRGHACPHNINPGLRFMCF

Query:  FHLFLPFISQIDGITISSLDDVPAGPVTSFFRSIRNTLDFDFEDENAGRWTSSEPPSLYIFINCSTRELAMIEKYVNCYHAIFDGGFDVFACTPGDSFWD
                  IDGITISSLDDVPAGPVTSFFRSIRNTLDFDFEDENAGRWTSSEPPSLYIFINCSTRELAMIEKYV                        
Subjt:  FHLFLPFISQIDGITISSLDDVPAGPVTSFFRSIRNTLDFDFEDENAGRWTSSEPPSLYIFINCSTRELAMIEKYVNCYHAIFDGGFDVFACTPGDSFWD

Query:  LQETFASSIPTLMFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVPIAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRF
          ETFASSIPTLMFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVPIAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRF
Subjt:  LQETFASSIPTLMFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVPIAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRF

Query:  TLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDNDSEVSSAWRS
        TLGETK+ELLRVLGLQEEQGSSLEFLRRGYKA+TWWEEDNDSEVSSAWRS
Subjt:  TLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDNDSEVSSAWRS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KA03 DUF1995 domain-containing protein

5.0e-196

80.44

Show/hide

Query:  MAIMAFLSSPPHIPSLVRPCHRNFLFSPISSSFSALRRSTRSSLFGAQTLATSGFCFRIHCSDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA
        MAIMAFLSSPPHIPSL  P H NFLFSPISSS   LRRSTRSSLFGAQTLA SGFCFRIHC DKERAAPVT+ SDPKAGVPIYKPKTYEVLVSDAANSLA
Subjt:  MAIMAFLSSPPHIPSLVRPCHRNFLFSPISSSFSALRRSTRSSLFGAQTLATSGFCFRIHCSDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA

Query:  YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPDKGRASQLFKTALDSKCGANRGHACPHNINPGLRFMCF
        YALEDGKMRLEIDFPPLPSNISSYKGSSD+FIDANIQLALAVARNLQEKRG RSCIVFPDKP+K RASQLFKTALDS                       
Subjt:  YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPDKGRASQLFKTALDSKCGANRGHACPHNINPGLRFMCF

Query:  FHLFLPFISQIDGITISSLDDVPAGPVTSFFRSIRNTLDFDFEDENAGRWTSSEPPSLYIFINCSTRELAMIEKYVNCYHAIFDGGFDVFACTPGDSFWD
                  IDGIT+SSLDDVPAG VTSFFRS+RNTLDFDFED+NAGRWTSS+PPSLYIFINCSTREL +IEKYV                        
Subjt:  FHLFLPFISQIDGITISSLDDVPAGPVTSFFRSIRNTLDFDFEDENAGRWTSSEPPSLYIFINCSTRELAMIEKYVNCYHAIFDGGFDVFACTPGDSFWD

Query:  LQETFASSIPTLMFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVPIAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRF
          ETFASSIP L+FNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTV +APYIVNYSGALFRQY GPWQVMLKQ+DNSYACVAESETRF
Subjt:  LQETFASSIPTLMFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVPIAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRF

Query:  TLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDNDSEVSSAWRS
        TLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEED DSEVSSAWRS
Subjt:  TLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDNDSEVSSAWRS

A0A1S3CFB8 protein LOW PSII ACCUMULATION 3, chloroplastic

3.4e-197

80.44

Show/hide

Query:  MAIMAFLSSPPHIPSLVRPCHRNFLFSPISSSFSALRRSTRSSLFGAQTLATSGFCFRIHCSDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA
        M IMAF+SSPP+IPSL RP   NFLFSPISSS   LRRST SSLFGAQTLA SGFCFRIHC DKERAAPVT+SSDPKAGVPIYKPKTYEVLVSDAANSLA
Subjt:  MAIMAFLSSPPHIPSLVRPCHRNFLFSPISSSFSALRRSTRSSLFGAQTLATSGFCFRIHCSDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA

Query:  YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPDKGRASQLFKTALDSKCGANRGHACPHNINPGLRFMCF
        YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKP+K RAS+LFKTA+DS                       
Subjt:  YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPDKGRASQLFKTALDSKCGANRGHACPHNINPGLRFMCF

Query:  FHLFLPFISQIDGITISSLDDVPAGPVTSFFRSIRNTLDFDFEDENAGRWTSSEPPSLYIFINCSTRELAMIEKYVNCYHAIFDGGFDVFACTPGDSFWD
                  IDGIT+SSLDDVPAGPVTSFFRS+RNTLDFDFED+NAGRWTSS+PPSLYIFINCSTREL +IEKYV                        
Subjt:  FHLFLPFISQIDGITISSLDDVPAGPVTSFFRSIRNTLDFDFEDENAGRWTSSEPPSLYIFINCSTRELAMIEKYVNCYHAIFDGGFDVFACTPGDSFWD

Query:  LQETFASSIPTLMFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVPIAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRF
          ETFASSIPTL+FNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTV +APYIVNYSGALFRQYPGPWQVMLKQ+DNSYACVAESETRF
Subjt:  LQETFASSIPTLMFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVPIAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRF

Query:  TLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDNDSEVSSAWRS
        TLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEED DSEVSSAWRS
Subjt:  TLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDNDSEVSSAWRS

A0A5A7UU42 Protein LOW PSII ACCUMULATION 3

2.4e-198

80.89

Show/hide

Query:  MAIMAFLSSPPHIPSLVRPCHRNFLFSPISSSFSALRRSTRSSLFGAQTLATSGFCFRIHCSDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA
        M IMAFLSSPP+IPSL RP H NFLFSPISSS   LRRST SSLFGAQTLA SGFCFRIHC DKERAAPVT+SSDPKAGVPIYKPKTYEVLVSDAANSLA
Subjt:  MAIMAFLSSPPHIPSLVRPCHRNFLFSPISSSFSALRRSTRSSLFGAQTLATSGFCFRIHCSDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA

Query:  YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPDKGRASQLFKTALDSKCGANRGHACPHNINPGLRFMCF
        YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKP+K RAS+LFKTA+DS                       
Subjt:  YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPDKGRASQLFKTALDSKCGANRGHACPHNINPGLRFMCF

Query:  FHLFLPFISQIDGITISSLDDVPAGPVTSFFRSIRNTLDFDFEDENAGRWTSSEPPSLYIFINCSTRELAMIEKYVNCYHAIFDGGFDVFACTPGDSFWD
                  IDGIT+SSLDDVPAGPVTSFFRS+RNTLDFDFED+NAGRWTSS+PPSLYIFINCSTREL +IEKYV                        
Subjt:  FHLFLPFISQIDGITISSLDDVPAGPVTSFFRSIRNTLDFDFEDENAGRWTSSEPPSLYIFINCSTRELAMIEKYVNCYHAIFDGGFDVFACTPGDSFWD

Query:  LQETFASSIPTLMFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVPIAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRF
          ETFASSIPTL+FNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTV +APYIVNYSGALFRQYPGPWQVMLKQ+DNSYACVAESETRF
Subjt:  LQETFASSIPTLMFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVPIAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRF

Query:  TLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDNDSEVSSAWRS
        TLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEED DSEVSSAWRS
Subjt:  TLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDNDSEVSSAWRS

A0A6J1GQW6 protein LOW PSII ACCUMULATION 3, chloroplastic

4.9e-212

86.22

Show/hide

Query:  MAIMAFLSSPPHIPSLVRPCHRNFLFSPISSSFSALRRSTRSSLFGAQTLATSGFCFRIHCSDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA
        MAIMAFLSSPPHIPSLVRP H NFLFSPI+SSFSALRRSTRSSLFGAQTLATSGFCFRIHCSDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA
Subjt:  MAIMAFLSSPPHIPSLVRPCHRNFLFSPISSSFSALRRSTRSSLFGAQTLATSGFCFRIHCSDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA

Query:  YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPDKGRASQLFKTALDSKCGANRGHACPHNINPGLRFMCF
        YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPDKGRASQLFKTALDS                       
Subjt:  YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPDKGRASQLFKTALDSKCGANRGHACPHNINPGLRFMCF

Query:  FHLFLPFISQIDGITISSLDDVPAGPVTSFFRSIRNTLDFDFEDENAGRWTSSEPPSLYIFINCSTRELAMIEKYVNCYHAIFDGGFDVFACTPGDSFWD
                  IDGITISSLDDVPAGPVTSFFRSIRNTLDFDFEDENAGRWTSSEPPSLYIFINCSTRELAMIEKYV                        
Subjt:  FHLFLPFISQIDGITISSLDDVPAGPVTSFFRSIRNTLDFDFEDENAGRWTSSEPPSLYIFINCSTRELAMIEKYVNCYHAIFDGGFDVFACTPGDSFWD

Query:  LQETFASSIPTLMFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVPIAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRF
          ETFASSIPTLMFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVPIAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRF
Subjt:  LQETFASSIPTLMFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVPIAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRF

Query:  TLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDNDSEVSSAWRS
        TLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDNDSEVSSAWRS
Subjt:  TLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDNDSEVSSAWRS

A0A6J1JTN7 protein LOW PSII ACCUMULATION 3, chloroplastic

8.4e-212

Show/hide

Query:  MAIMAFLSSPPHIPSLVRPCHRNFLFSPISSSFSALRRSTRSSLFGAQTLATSGFCFRIHCSDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA
        MAIMAFLSSPPHIPSLVRP H NFLFSPISSSFSALRRSTRSSLFGAQTLATSGFCFRIHCSDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA
Subjt:  MAIMAFLSSPPHIPSLVRPCHRNFLFSPISSSFSALRRSTRSSLFGAQTLATSGFCFRIHCSDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLA

Query:  YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPDKGRASQLFKTALDSKCGANRGHACPHNINPGLRFMCF
        YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPDKGRASQLFKTALDS                       
Subjt:  YALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPDKGRASQLFKTALDSKCGANRGHACPHNINPGLRFMCF

Query:  FHLFLPFISQIDGITISSLDDVPAGPVTSFFRSIRNTLDFDFEDENAGRWTSSEPPSLYIFINCSTRELAMIEKYVNCYHAIFDGGFDVFACTPGDSFWD
                  IDGITISSLDD+PAGPVTSFFRSIRNTLDFDFEDENAGRWTSSEPPSLYIFINCSTRELAMIEKYV                        
Subjt:  FHLFLPFISQIDGITISSLDDVPAGPVTSFFRSIRNTLDFDFEDENAGRWTSSEPPSLYIFINCSTRELAMIEKYVNCYHAIFDGGFDVFACTPGDSFWD

Query:  LQETFASSIPTLMFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVPIAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRF
          ETFASSIPTLMFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVPIAPYIVNYSGALFRQYPGPWQVMLKQ DNSYACVAESETRF
Subjt:  LQETFASSIPTLMFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVPIAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRF

Query:  TLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDNDSEVSSAWRS
        TLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDNDSEVSSAWRS
Subjt:  TLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDNDSEVSSAWRS

SwissProt top hits

e value

%identity

Alignment

Q8H0W0 Protein LPA3

2.2e-140

62.62

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Query:  SLFGAQTLATSGFCFRIHCSDKERA----APVTRSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQL
        +LF + ++ TS    RI C     +    +  + +SDP+ GVP+YKPK+YEVL +DAANSLA+AL+D K RLEIDFPPLPS+ISSYKGSSD+FIDANIQL
Subjt:  SLFGAQTLATSGFCFRIHCSDKERA----APVTRSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQL

Query:  ALAVARNLQEKRGTRSCIVFPDKPDKGRASQLFKTALDSKCGANRGHACPHNINPGLRFMCFFHLFLPFISQIDGITISSLDDVPAGPVTSFFRSIRNTL
        A+ V R LQEK  TR+CIVFPDKP+K RASQ FK A DS                                 +DGI+I SLDD+P   VT+FFRSIR+TL
Subjt:  ALAVARNLQEKRGTRSCIVFPDKPDKGRASQLFKTALDSKCGANRGHACPHNINPGLRFMCFFHLFLPFISQIDGITISSLDDVPAGPVTSFFRSIRNTL

Query:  DFDFEDENAGRWTSSEPPSLYIFINCSTRELAMIEKYVNCYHAIFDGGFDVFACTPGDSFWDLQETFASSIPTLMFNLELETLRADLGLLGFPPKDLHYR
        DFDFEDEN G W   EPP+LYIFINCSTREL+ IEK+V                          ETFASS P L+FNLEL+TLRADLGLLGFPPKDLHYR
Subjt:  DFDFEDENAGRWTSSEPPSLYIFINCSTRELAMIEKYVNCYHAIFDGGFDVFACTPGDSFWDLQETFASSIPTLMFNLELETLRADLGLLGFPPKDLHYR

Query:  FLSQFIPVFYIRIREYSKTVPIAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEE
        FLSQFIPVFYIR REYSKTV +AP+++NY+GALFRQYPGPWQVMLKQ D S+ACVAES TRFTLGETK+ELL+VLGLQEE+GSSLEFLRRGYK+ATWWEE
Subjt:  FLSQFIPVFYIRIREYSKTVPIAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEE

Query:  DNDSEVSSAWRS
        D + E SS WR+
Subjt:  DNDSEVSSAWRS

Arabidopsis top hits

e value

%identity

Alignment

AT1G73060.1 Low PSII Accumulation 3

1.6e-141

62.62

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Query:  SLFGAQTLATSGFCFRIHCSDKERA----APVTRSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQL
        +LF + ++ TS    RI C     +    +  + +SDP+ GVP+YKPK+YEVL +DAANSLA+AL+D K RLEIDFPPLPS+ISSYKGSSD+FIDANIQL
Subjt:  SLFGAQTLATSGFCFRIHCSDKERA----APVTRSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRLEIDFPPLPSNISSYKGSSDEFIDANIQL

Query:  ALAVARNLQEKRGTRSCIVFPDKPDKGRASQLFKTALDSKCGANRGHACPHNINPGLRFMCFFHLFLPFISQIDGITISSLDDVPAGPVTSFFRSIRNTL
        A+ V R LQEK  TR+CIVFPDKP+K RASQ FK A DS                                 +DGI+I SLDD+P   VT+FFRSIR+TL
Subjt:  ALAVARNLQEKRGTRSCIVFPDKPDKGRASQLFKTALDSKCGANRGHACPHNINPGLRFMCFFHLFLPFISQIDGITISSLDDVPAGPVTSFFRSIRNTL

Query:  DFDFEDENAGRWTSSEPPSLYIFINCSTRELAMIEKYVNCYHAIFDGGFDVFACTPGDSFWDLQETFASSIPTLMFNLELETLRADLGLLGFPPKDLHYR
        DFDFEDEN G W   EPP+LYIFINCSTREL+ IEK+V                          ETFASS P L+FNLEL+TLRADLGLLGFPPKDLHYR
Subjt:  DFDFEDENAGRWTSSEPPSLYIFINCSTRELAMIEKYVNCYHAIFDGGFDVFACTPGDSFWDLQETFASSIPTLMFNLELETLRADLGLLGFPPKDLHYR

Query:  FLSQFIPVFYIRIREYSKTVPIAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEE
        FLSQFIPVFYIR REYSKTV +AP+++NY+GALFRQYPGPWQVMLKQ D S+ACVAES TRFTLGETK+ELL+VLGLQEE+GSSLEFLRRGYK+ATWWEE
Subjt:  FLSQFIPVFYIRIREYSKTVPIAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEE

Query:  DNDSEVSSAWRS
        D + E SS WR+
Subjt:  DNDSEVSSAWRS

AT5G48790.1 Domain of unknown function (DUF1995)

4.7e-05

32.71

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Query:  LMFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKT----VPIAPYIVNY----SGALFRQYPGPWQVMLKQADNSYACVAESETRFTLG
        ++FN EL+ +R+     G+ PK             FY ++   +KT    +    YI N+     G LFR YPGPWQV L++  N Y CV + E+  +L 
Subjt:  LMFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKT----VPIAPYIVNY----SGALFRQYPGPWQVMLKQADNSYACVAESETRFTLG

Query:  ETKDELL
        E   ++L
Subjt:  ETKDELL

Sequences

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CDS sequence

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ATGGCGATCATGGCGTTTCTCTCTTCTCCACCGCACATTCCCTCTCTGGTTCGACCGTGTCACAGAAATTTTCTATTCTCTCCTATTTCCTCTTCCTTCAGTGCTCTACG
GCGTTCTACTCGATCCAGTTTATTTGGCGCTCAAACTTTAGCGACTTCGGGATTTTGCTTTAGGATACACTGCAGTGACAAAGAACGAGCTGCACCGGTTACTCGGAGCT
CCGATCCTAAGGCTGGAGTTCCGATTTATAAGCCTAAAACCTACGAGGTGCTAGTCTCCGATGCTGCGAATTCTCTTGCTTATGCTCTGGAGGATGGAAAGATGCGCTTG
GAGATTGATTTCCCACCCCTGCCTAGCAACATTTCCTCGTACAAGGGATCTTCAGATGAGTTCATTGATGCAAATATTCAACTTGCCCTGGCTGTTGCAAGGAATCTTCA
AGAAAAGAGAGGAACTAGATCTTGCATTGTATTTCCAGATAAACCAGACAAAGGCAGAGCTTCACAGTTGTTCAAAACAGCTCTCGACTCGAAATGCGGAGCTAATCGAG
GGCATGCTTGTCCACACAATATAAATCCTGGTCTCCGTTTTATGTGCTTTTTTCATTTGTTTTTGCCTTTTATCTCTCAGATTGATGGAATAACCATAAGTTCCCTAGAT
GATGTTCCTGCTGGACCTGTCACTTCTTTTTTCAGATCTATTAGAAACACCCTTGATTTTGATTTTGAAGACGAGAATGCAGGTCGTTGGACTTCTAGTGAACCTCCATC
TCTGTACATATTTATTAATTGCAGCACGCGTGAACTTGCAATGATAGAGAAGTATGTGAACTGCTATCATGCCATCTTTGATGGTGGATTCGATGTTTTTGCCTGTACTC
CCGGTGACTCATTTTGGGATTTGCAGGAAACTTTTGCTTCGTCAATCCCCACCCTGATGTTTAATCTAGAACTTGAAACCTTGCGTGCAGACTTGGGCTTACTGGGATTC
CCCCCCAAAGATTTGCATTATCGATTTCTCTCTCAGTTTATCCCGGTGTTTTACATTAGAATCAGAGAGTATTCTAAGACAGTACCAATAGCACCTTATATTGTTAATTA
CAGTGGAGCATTGTTTCGTCAATACCCTGGACCTTGGCAAGTGATGTTAAAACAAGCAGATAATTCTTATGCTTGCGTCGCAGAGAGTGAGACGAGGTTCACCCTTGGTG
AAACCAAAGATGAACTACTAAGGGTCCTTGGACTACAGGAAGAACAAGGAAGCTCATTAGAATTTCTTCGCAGGGGCTACAAGGCTGCCACTTGGTGGGAAGAAGATAAT
GACTCTGAAGTATCTTCGGCATGGCGTAGTTGA

mRNA sequence

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Protein sequence

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MAIMAFLSSPPHIPSLVRPCHRNFLFSPISSSFSALRRSTRSSLFGAQTLATSGFCFRIHCSDKERAAPVTRSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKMRL
EIDFPPLPSNISSYKGSSDEFIDANIQLALAVARNLQEKRGTRSCIVFPDKPDKGRASQLFKTALDSKCGANRGHACPHNINPGLRFMCFFHLFLPFISQIDGITISSLD
DVPAGPVTSFFRSIRNTLDFDFEDENAGRWTSSEPPSLYIFINCSTRELAMIEKYVNCYHAIFDGGFDVFACTPGDSFWDLQETFASSIPTLMFNLELETLRADLGLLGF
PPKDLHYRFLSQFIPVFYIRIREYSKTVPIAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKAATWWEEDN
DSEVSSAWRS

Carg18734 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome