CuGenDBv2

Gene ID	Carg18735
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	photosynthetic NDH subunit of subcomplex B 1, chloroplastic
Genome location	Carg_Chr17:7185209..7189273
RNA-Seq Expression	Carg18735
Synteny	Carg18735
Gene Ontology terms	GO:0009773 - photosynthetic electron transport in photosystem I (biological process) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0010598 - NAD(P)H dehydrogenase complex (plastoquinone) (cellular component) GO:0016757 - transferase activity, transferring glycosyl groups (molecular function)
InterPro domains	IPR044983 - Photosynthetic NDH subunit of subcomplex B 1, chloroplastic

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6575629.1 Photosynthetic NDH subunit of subcomplex B 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

1.3e-270

100

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Query:  MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPSKLHIPSCAKKNPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY
        MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPSKLHIPSCAKKNPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY
Subjt:  MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPSKLHIPSCAKKNPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY

Query:  GFLKFPQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPADYTDMVGLL
        GFLKFPQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPADYTDMVGLL
Subjt:  GFLKFPQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPADYTDMVGLL

Query:  KGRYYDMVLSTKLAGIGHAAFLFMTTARDRVSYIYPDVNAAGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEIV
        KGRYYDMVLSTKLAGIGHAAFLFMTTARDRVSYIYPDVNAAGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEIV
Subjt:  KGRYYDMVLSTKLAGIGHAAFLFMTTARDRVSYIYPDVNAAGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEIV

Query:  KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIPHEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIAT
        KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIPHEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIAT
Subjt:  KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIPHEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIAT

Query:  NTAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCIAVSSTTGRLIDIDMGTVKRAIQSFEVPLALAFQ
        NTAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCIAVSSTTGRLIDIDMGTVKRAIQSFEVPLALAFQ
Subjt:  NTAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCIAVSSTTGRLIDIDMGTVKRAIQSFEVPLALAFQ

XP_022953552.1 photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Cucurbita moschata]

1.1e-269

99.58

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Query:  MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPSKLHIPSCAKKNPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY
        MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPSKLHIPSCAKKNPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY
Subjt:  MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPSKLHIPSCAKKNPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY

Query:  GFLKFPQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPADYTDMVGLL
        GFLKFPQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPADYTDMVGLL
Subjt:  GFLKFPQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPADYTDMVGLL

Query:  KGRYYDMVLSTKLAGIGHAAFLFMTTARDRVSYIYPDVNAAGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEIV
        KGRYYDMVLSTKLAGIGHAAFLFMTTARDRVSYIYPDVNAAGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEIV
Subjt:  KGRYYDMVLSTKLAGIGHAAFLFMTTARDRVSYIYPDVNAAGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEIV

Query:  KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIPHEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIAT
        KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIPHEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIAT
Subjt:  KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIPHEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIAT

Query:  NTAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCIAVSSTTGRLIDIDMGTVKRAIQSFEVPLALAFQ
        NTAAIQLAIAREKPSIALFCSEEKAKLFVPD+EAKRCIAVSS TGRLIDIDMGTVKRAIQSFEVPLALAFQ
Subjt:  NTAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCIAVSSTTGRLIDIDMGTVKRAIQSFEVPLALAFQ

XP_022992479.1 photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Cucurbita maxima]

1.6e-268

98.94

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Query:  MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPSKLHIPSCAKKNPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY
        MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPSKLHIPSCAKKNPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY
Subjt:  MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPSKLHIPSCAKKNPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY

Query:  GFLKFPQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPADYTDMVGLL
        GFLKFPQGYMVE+ASLGLKLRGDVRRCCCVISGGVYENLLFFP IQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPADYTDMVGLL
Subjt:  GFLKFPQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPADYTDMVGLL

Query:  KGRYYDMVLSTKLAGIGHAAFLFMTTARDRVSYIYPDVNAAGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEIV
        KGRYYDMVLSTKLAGIGHAAFLFMTTARDRVSYIYPDVNAAGAGLFLSQTFKP+SSNLSEGGFNMYHQM DWLGRPFRSVPRHPVPPLKVSISRKLKEIV
Subjt:  KGRYYDMVLSTKLAGIGHAAFLFMTTARDRVSYIYPDVNAAGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEIV

Query:  KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIPHEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIAT
        KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIPHEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIAT
Subjt:  KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIPHEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIAT

Query:  NTAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCIAVSSTTGRLIDIDMGTVKRAIQSFEVPLALAFQ
        NTAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCIAVSS TGRLIDIDMGTVKRAIQSFEVPLALAFQ
Subjt:  NTAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCIAVSSTTGRLIDIDMGTVKRAIQSFEVPLALAFQ

XP_023548446.1 photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Cucurbita pepo subsp. pepo]

6.2e-268

99.15

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Query:  MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPSKLHIPSCAKKNPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY
        MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSP KLHIPSCAKKNPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY
Subjt:  MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPSKLHIPSCAKKNPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY

Query:  GFLKFPQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPADYTDMVGLL
        GFLKFPQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPADYTDMVGLL
Subjt:  GFLKFPQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPADYTDMVGLL

Query:  KGRYYDMVLSTKLAGIGHAAFLFMTTARDRVSYIYPDVNAAGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEIV
        KGRYYDMVLSTKLAG GHAAFLFMTTARDRVSYIYPDVNAAGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRH VPPLKVSISRKLKEIV
Subjt:  KGRYYDMVLSTKLAGIGHAAFLFMTTARDRVSYIYPDVNAAGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEIV

Query:  KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIPHEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIAT
        KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIPHEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIAT
Subjt:  KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIPHEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIAT

Query:  NTAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCIAVSSTTGRLIDIDMGTVKRAIQSFEVPLALAFQ
        NTAAIQLAIAREKPSIALFCSEEKAKLFVP+AEAKRCIAVSSTTGRLIDIDMGTVKRAIQSFEVPLALAFQ
Subjt:  NTAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCIAVSSTTGRLIDIDMGTVKRAIQSFEVPLALAFQ

XP_038896546.1 photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Benincasa hispida]

1.9e-253

93.84

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Query:  MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPSKLHIPSCAKKNPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY
        MATSSLPTKSLPPF P SSF PSSPSTHFTKP FLAPPDISLSTSSSS SKL IPS +KKN WLDPFDDGDDP+MEYGSLFADGKQEEDPRPPDNPNNPY
Subjt:  MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPSKLHIPSCAKKNPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY

Query:  GFLKFPQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPADYTDMVGLL
        GFLKFPQGYMVE+ASLGLKLRGDVRRCCCV+SGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPA+YTDMVGLL
Subjt:  GFLKFPQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPADYTDMVGLL

Query:  KGRYYDMVLSTKLAGIGHAAFLFMTTARDRVSYIYPDVNAAGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEIV
        KGRYYDMVLSTKLAG+GHA FLFMTTARDRVSYIYPDVNAAGAGLFLS+TFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKE+V
Subjt:  KGRYYDMVLSTKLAGIGHAAFLFMTTARDRVSYIYPDVNAAGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEIV

Query:  KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIPHEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIAT
         EKY +AG EKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANA+RGFKPVFVIPHEKERENVEEEVGD+ASIVFITTPGQLAALINDSAGVIAT
Subjt:  KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIPHEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIAT

Query:  NTAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCIAVSSTTGRLIDIDMGTVKRAIQSFEVPLALAFQ
        NTAA+QLAIAREKPSIALFCSEEKAKLFVPDAEAKRCI VSS TGRL DID+GTVK+AIQSFEVPLALAFQ
Subjt:  NTAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCIAVSSTTGRLIDIDMGTVKRAIQSFEVPLALAFQ

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CEK1 photosynthetic NDH subunit of subcomplex B 1, chloroplastic

1.1e-249

92.14

Show/hide

Query:  MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPSKLHIPSCAKKNPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY
        MATSSLPTKSLPPFLP SSFPPSSPSTHFTKP FL+P  ISLSTS    SKL IP C+KKNPW DPFDDG+DP+MEYGSLF+DGKQEEDPRPPDNPNNPY
Subjt:  MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPSKLHIPSCAKKNPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY

Query:  GFLKFPQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPADYTDMVGLL
        GFLKFPQGYMVE+ASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPA+YTDMVG+L
Subjt:  GFLKFPQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPADYTDMVGLL

Query:  KGRYYDMVLSTKLAGIGHAAFLFMTTARDRVSYIYPDVNAAGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEIV
        KGRYYDMVLSTKLAGIGHA FLFMTTARDRVSYIYPDVNAAGAGLFLS+TFKP+SSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSI+RKLKE++
Subjt:  KGRYYDMVLSTKLAGIGHAAFLFMTTARDRVSYIYPDVNAAGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEIV

Query:  KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIPHEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIAT
         EKY +AGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPI+AWAEIAN IRGFKPVFVIP EKERENVEEEVG+NASIVFITTPGQLAALINDSAG+IAT
Subjt:  KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIPHEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIAT

Query:  NTAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCIAVSSTTGRLIDIDMGTVKRAIQSFEVPLALAFQ
        NTAA+QLAIAREKPSIALFCSEEKAKLFVPDAEAKRCI VSSTTGRLIDIDMGT+K+AIQSFEVPLALAFQ
Subjt:  NTAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCIAVSSTTGRLIDIDMGTVKRAIQSFEVPLALAFQ

A0A5A7UYW0 Photosynthetic NDH subunit of subcomplex B 1

1.3e-250

92.36

Show/hide

Query:  MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPSKLHIPSCAKKNPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY
        MATSSLPTKSLPPFLP SSFPPSSPSTHFTKP FL+P  ISLSTS    SKL IP C+KKNPW DPFDDG+DP+MEYGSLF+DGKQEEDPRPPDNPNNPY
Subjt:  MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPSKLHIPSCAKKNPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY

Query:  GFLKFPQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPADYTDMVGLL
        GFLKFPQGYMVE+ASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPA+YTDMVG+L
Subjt:  GFLKFPQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPADYTDMVGLL

Query:  KGRYYDMVLSTKLAGIGHAAFLFMTTARDRVSYIYPDVNAAGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEIV
        KGRYYDMVLSTKLAGIGHA FLFMTTARDRVSYIYPDVNAAGAGLFLS+TFKP+SSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSI+RKLKE++
Subjt:  KGRYYDMVLSTKLAGIGHAAFLFMTTARDRVSYIYPDVNAAGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEIV

Query:  KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIPHEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIAT
         EKY +AGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPI+AWAEIAN IRGFKPVFVIPHEKERENVEEEVG+NASIVFITTPGQLAALINDSAG+IAT
Subjt:  KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIPHEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIAT

Query:  NTAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCIAVSSTTGRLIDIDMGTVKRAIQSFEVPLALAFQ
        NTAA+QLAIAREKPSIALFCSEEKAKLFVPDAEAKRCI VSSTTGRLIDIDMGT+K+AIQSFEVPLALAFQ
Subjt:  NTAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCIAVSSTTGRLIDIDMGTVKRAIQSFEVPLALAFQ

A0A6J1CV27 photosynthetic NDH subunit of subcomplex B 1, chloroplastic

5.3e-249

91.91

Show/hide

Query:  MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPSKLHIPSCAKKNPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY
        MATSSLPTKSLPPFLP+S+ PPSSPSTHFTKP FLAPPDIS  +++ SP K HIP+ AKKNPW DPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY
Subjt:  MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPSKLHIPSCAKKNPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY

Query:  GFLKFPQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPADYTDMVGLL
        GFLKFPQGYMVE+ASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPA+YTDMVGLL
Subjt:  GFLKFPQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPADYTDMVGLL

Query:  KGRYYDMVLSTKLAGIGHAAFLFMTTARDRVSYIYPDVNAAGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEIV
        K RYYDMVLSTKLAG+GHA FLFMTTARDRVSYIYPDVNAAGAGLFLS+TFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKV ISRKLKE+V
Subjt:  KGRYYDMVLSTKLAGIGHAAFLFMTTARDRVSYIYPDVNAAGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEIV

Query:  KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIPHEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIAT
        +EKY +AG EKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIA+ IRGFKPVFVIPHEKERENVEEEVGD+A I+FITTPGQLAALINDSAG+IAT
Subjt:  KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIPHEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIAT

Query:  NTAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCIAVSSTTGRLIDIDMGTVKRAIQSFEVPLALAF
        NTAAIQLAIAREKPSIALF S+EKAKLFVPDAE+KRCI VSS TGRLIDIDMGTVKRAIQSFEVPLALAF
Subjt:  NTAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCIAVSSTTGRLIDIDMGTVKRAIQSFEVPLALAF

A0A6J1GNJ2 photosynthetic NDH subunit of subcomplex B 1, chloroplastic

5.4e-270

99.58

Show/hide

Query:  MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPSKLHIPSCAKKNPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY
        MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPSKLHIPSCAKKNPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY
Subjt:  MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPSKLHIPSCAKKNPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY

Query:  GFLKFPQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPADYTDMVGLL
        GFLKFPQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPADYTDMVGLL
Subjt:  GFLKFPQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPADYTDMVGLL

Query:  KGRYYDMVLSTKLAGIGHAAFLFMTTARDRVSYIYPDVNAAGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEIV
        KGRYYDMVLSTKLAGIGHAAFLFMTTARDRVSYIYPDVNAAGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEIV
Subjt:  KGRYYDMVLSTKLAGIGHAAFLFMTTARDRVSYIYPDVNAAGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEIV

Query:  KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIPHEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIAT
        KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIPHEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIAT
Subjt:  KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIPHEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIAT

Query:  NTAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCIAVSSTTGRLIDIDMGTVKRAIQSFEVPLALAFQ
        NTAAIQLAIAREKPSIALFCSEEKAKLFVPD+EAKRCIAVSS TGRLIDIDMGTVKRAIQSFEVPLALAFQ
Subjt:  NTAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCIAVSSTTGRLIDIDMGTVKRAIQSFEVPLALAFQ

A0A6J1JXN2 photosynthetic NDH subunit of subcomplex B 1, chloroplastic

7.9e-269

98.94

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Query:  MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPSKLHIPSCAKKNPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY
        MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPSKLHIPSCAKKNPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY
Subjt:  MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPSKLHIPSCAKKNPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPY

Query:  GFLKFPQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPADYTDMVGLL
        GFLKFPQGYMVE+ASLGLKLRGDVRRCCCVISGGVYENLLFFP IQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPADYTDMVGLL
Subjt:  GFLKFPQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPADYTDMVGLL

Query:  KGRYYDMVLSTKLAGIGHAAFLFMTTARDRVSYIYPDVNAAGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEIV
        KGRYYDMVLSTKLAGIGHAAFLFMTTARDRVSYIYPDVNAAGAGLFLSQTFKP+SSNLSEGGFNMYHQM DWLGRPFRSVPRHPVPPLKVSISRKLKEIV
Subjt:  KGRYYDMVLSTKLAGIGHAAFLFMTTARDRVSYIYPDVNAAGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEIV

Query:  KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIPHEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIAT
        KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIPHEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIAT
Subjt:  KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIPHEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIAT

Query:  NTAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCIAVSSTTGRLIDIDMGTVKRAIQSFEVPLALAFQ
        NTAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCIAVSS TGRLIDIDMGTVKRAIQSFEVPLALAFQ
Subjt:  NTAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCIAVSSTTGRLIDIDMGTVKRAIQSFEVPLALAFQ

SwissProt top hits

e value

%identity

Alignment

Q9S9N6 Photosynthetic NDH subunit of subcomplex B 1, chloroplastic

7.0e-190

73.1

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Query:  ASSFP--PSSPSTHFTKPPF-LAPPDISLS-----TSSSSPSKLHIPSCAKKNPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQG
        ASS P  P   S  F  PPF  + P + L+     TS SS   +++    K NPWLDPFD G+DPD EYGSLFADGKQ+EDPRPPDNP+NPYGFLKFP+G
Subjt:  ASSFP--PSSPSTHFTKPPF-LAPPDISLS-----TSSSSPSKLHIPSCAKKNPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQG

Query:  YMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPADYTDMVGLLKGRYYDMV
        Y VE+ASL LK+RGDVRRCCCVISGGVYENLLFFP IQL+KDRYPGVQ+D++ + RGKQTYELNKNVRW+NVYDPDD++PEPA+YTDM+GLLKGRYYDMV
Subjt:  YMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPADYTDMVGLLKGRYYDMV

Query:  LSTKLAGIGHAAFLFMTTARDRVSYIYPDVNAAGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEIVKEKYNQAG
        LSTKLAG+GHAAFLFMTTARDRVSYIYP+VN+AGAGL LS+TF  +++NLSE G++MY QM DWLGRPFRSVPR P+ PL+VSISRK+KE+V  KY  AG
Subjt:  LSTKLAGIGHAAFLFMTTARDRVSYIYPDVNAAGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEIVKEKYNQAG

Query:  VEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIPHEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIATNTAAIQLA
           GK+IVIHGIESDSKASMQSKGD DSLL ++ WA+I   +RGFKPVFVIPHEKERENVE+ VGD+ SIVFITTPGQLAALINDSAGVIATNTAAIQLA
Subjt:  VEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIPHEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIATNTAAIQLA

Query:  IAREKPSIALFCSEEKAKLFVPDAEAK-RCIAVSSTTGRLIDIDMGTVKRAIQSFEVPLAL
         AR+KP I LF SEEK KLFVP AE K  C+ ++S TG+L DID+GTVK A+Q FE  LAL
Subjt:  IAREKPSIALFCSEEKAKLFVPDAEAK-RCIAVSSTTGRLIDIDMGTVKRAIQSFEVPLAL

Arabidopsis top hits

e value

%identity

Alignment

AT1G15980.1 NDH-dependent cyclic electron flow 1

5.0e-191

73.1

Show/hide

Query:  ASSFP--PSSPSTHFTKPPF-LAPPDISLS-----TSSSSPSKLHIPSCAKKNPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQG
        ASS P  P   S  F  PPF  + P + L+     TS SS   +++    K NPWLDPFD G+DPD EYGSLFADGKQ+EDPRPPDNP+NPYGFLKFP+G
Subjt:  ASSFP--PSSPSTHFTKPPF-LAPPDISLS-----TSSSSPSKLHIPSCAKKNPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQG

Query:  YMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPADYTDMVGLLKGRYYDMV
        Y VE+ASL LK+RGDVRRCCCVISGGVYENLLFFP IQL+KDRYPGVQ+D++ + RGKQTYELNKNVRW+NVYDPDD++PEPA+YTDM+GLLKGRYYDMV
Subjt:  YMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPADYTDMVGLLKGRYYDMV

Query:  LSTKLAGIGHAAFLFMTTARDRVSYIYPDVNAAGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEIVKEKYNQAG
        LSTKLAG+GHAAFLFMTTARDRVSYIYP+VN+AGAGL LS+TF  +++NLSE G++MY QM DWLGRPFRSVPR P+ PL+VSISRK+KE+V  KY  AG
Subjt:  LSTKLAGIGHAAFLFMTTARDRVSYIYPDVNAAGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEIVKEKYNQAG

Query:  VEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIPHEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIATNTAAIQLA
           GK+IVIHGIESDSKASMQSKGD DSLL ++ WA+I   +RGFKPVFVIPHEKERENVE+ VGD+ SIVFITTPGQLAALINDSAGVIATNTAAIQLA
Subjt:  VEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIPHEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIATNTAAIQLA

Query:  IAREKPSIALFCSEEKAKLFVPDAEAK-RCIAVSSTTGRLIDIDMGTVKRAIQSFEVPLAL
         AR+KP I LF SEEK KLFVP AE K  C+ ++S TG+L DID+GTVK A+Q FE  LAL
Subjt:  IAREKPSIALFCSEEKAKLFVPDAEAK-RCIAVSSTTGRLIDIDMGTVKRAIQSFEVPLAL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCTACTTCTTCTCTTCCCACCAAATCCCTCCCGCCATTTTTGCCGGCATCAAGCTTTCCACCTTCTTCTCCTTCAACCCACTTCACTAAGCCGCCATTCCTAGCCCC
ACCTGACATTTCTCTCTCCACCTCTTCCTCATCGCCCTCTAAACTTCATATTCCCAGTTGTGCCAAGAAGAATCCCTGGCTCGACCCTTTCGACGATGGCGATGATCCGG
ACATGGAATACGGCTCTCTCTTCGCCGATGGGAAGCAGGAAGAGGACCCTCGCCCACCGGACAATCCGAACAATCCGTATGGGTTCTTGAAATTTCCTCAGGGTTATATG
GTGGAAGTTGCTTCTCTAGGTCTTAAACTCCGGGGAGATGTACGGCGGTGCTGCTGCGTGATTTCCGGCGGGGTCTATGAAAACCTACTCTTCTTTCCGGCCATTCAATT
GCTCAAGGATCGGTACCCGGGTGTTCAAATCGACGTGGTGGCTTCGGCGAGGGGTAAACAGACTTATGAATTGAATAAGAATGTGCGATGGTCTAATGTCTATGATCCGG
ATGATTATTTTCCTGAACCGGCCGATTACACTGACATGGTTGGATTGCTCAAGGGTAGATATTATGATATGGTGTTGTCAACAAAGCTAGCAGGGATTGGGCATGCGGCG
TTTTTGTTCATGACAACAGCCAGAGACAGAGTTAGCTACATTTACCCTGATGTGAATGCTGCTGGAGCAGGGCTTTTCTTGTCTCAAACATTTAAACCAGATAGCTCTAA
TCTTTCCGAGGGAGGGTTCAACATGTATCATCAAATGGTTGATTGGTTAGGGAGACCATTTCGTAGCGTTCCCAGGCATCCCGTTCCTCCGCTCAAAGTTTCGATTTCAA
GAAAATTGAAGGAGATTGTAAAGGAAAAGTATAATCAAGCAGGTGTTGAGAAAGGAAAATATATTGTGATTCATGGAATAGAATCAGATTCAAAAGCCTCAATGCAGTCC
AAAGGTGATACTGATAGCTTGCTACCCATTCAAGCCTGGGCTGAAATAGCCAATGCTATAAGGGGATTCAAGCCAGTTTTTGTCATTCCGCACGAAAAAGAAAGGGAAAA
CGTCGAGGAGGAGGTCGGAGATAACGCAAGCATCGTATTTATCACTACCCCAGGACAGTTAGCTGCTCTCATTAACGACTCGGCTGGTGTAATAGCTACCAACACAGCTG
CGATCCAACTCGCCATTGCTCGCGAAAAACCAAGCATTGCATTGTTTTGCTCTGAAGAGAAAGCAAAACTATTTGTTCCGGACGCCGAAGCAAAGAGATGCATCGCAGTT
TCATCGACAACGGGACGACTAATCGACATCGATATGGGCACAGTTAAAAGGGCGATTCAGAGCTTTGAAGTGCCTCTAGCTCTTGCTTTTCAGTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPSKLHIPSCAKKNPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYM
VEVASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPADYTDMVGLLKGRYYDMVLSTKLAGIGHAA
FLFMTTARDRVSYIYPDVNAAGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEIVKEKYNQAGVEKGKYIVIHGIESDSKASMQS
KGDTDSLLPIQAWAEIANAIRGFKPVFVIPHEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIATNTAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCIAV
SSTTGRLIDIDMGTVKRAIQSFEVPLALAFQ

Carg18735 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome