; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg18739 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18739
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionzinc finger protein 1
Genome locationCarg_Chr17:7166885..7167483
RNA-Seq ExpressionCarg18739
SyntenyCarg18739
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575625.1 Zinc finger protein 3, partial [Cucurbita argyrosperma subsp. sororia]3.0e-6362.01Show/hide
Query:  MDSPPEIKDPSDSKDISLELVSLDLSLSNKDLGGSLPEELNLIDFFCADNLPNYISYEGTEAAAKPR---------------------------------
        MDSPPEIKDPSDSKDIS ELVSLDLSLSNKDLGGSLPEELNLIDFFCADNLPNYISYEGTEAAAKPR                                 
Subjt:  MDSPPEIKDPSDSKDISLELVSLDLSLSNKDLGGSLPEELNLIDFFCADNLPNYISYEGTEAAAKPR---------------------------------

Query:  -----------------------------------------------------PEVWDRQPLYTQVATGKWPLSKNYRSGASPVLPSSSGATGFDGGWRL
                                                             PEVWDRQPLYTQVATGKWPLSKNYRSGASPVLPSSSGATGFDGGWRL
Subjt:  -----------------------------------------------------PEVWDRQPLYTQVATGKWPLSKNYRSGASPVLPSSSGATGFDGGWRL

Query:  SSNSDTLLDSKRPHNELHKLDCLDLSLRL
        SSNSDTLLDSKRPHNELHKLDCLDLSLRL
Subjt:  SSNSDTLLDSKRPHNELHKLDCLDLSLRL

KAG7014175.1 Zinc finger protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma]3.7e-7764.59Show/hide
Query:  MSLPAKSEPETTSINSLADELPWLQQVSMDSPPEIKDPSDSKDISLELVSLDLSLSNKDLGGSLPEELNLIDFFCADNLPNYISYEGTEAAAKPRP----
        MSLPAKSEPETTSINSLADELPWLQQVSMDSPPE+KDPSDSKDIS ELVSLDLSLSNKDLGGSLPEELNLIDFFCADNLPNYISYEGTEAAAKPR     
Subjt:  MSLPAKSEPETTSINSLADELPWLQQVSMDSPPEIKDPSDSKDISLELVSLDLSLSNKDLGGSLPEELNLIDFFCADNLPNYISYEGTEAAAKPRP----

Query:  ----------------------------------------------------------------------------------EVWDRQPLYTQVATGKWP
                                                                                          EVWDRQPLYTQVATGKWP
Subjt:  ----------------------------------------------------------------------------------EVWDRQPLYTQVATGKWP

Query:  LSKNYRSGASPVLPSSSGATGFDGGWRLSSNSDTLLDSKRPHNELHKLDCLDLSLRL
        LSKNY+SGASPVLPSSSGA GFDGGWRLSSNSDTLLDSKRPHNELHKLDCLDLSLRL
Subjt:  LSKNYRSGASPVLPSSSGATGFDGGWRLSSNSDTLLDSKRPHNELHKLDCLDLSLRL

KAG7014179.1 hypothetical protein SDJN02_24353, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-91100Show/hide
Query:  MSLPAKSEPETTSINSLADELPWLQQVSMDSPPEIKDPSDSKDISLELVSLDLSLSNKDLGGSLPEELNLIDFFCADNLPNYISYEGTEAAAKPRPEVWD
        MSLPAKSEPETTSINSLADELPWLQQVSMDSPPEIKDPSDSKDISLELVSLDLSLSNKDLGGSLPEELNLIDFFCADNLPNYISYEGTEAAAKPRPEVWD
Subjt:  MSLPAKSEPETTSINSLADELPWLQQVSMDSPPEIKDPSDSKDISLELVSLDLSLSNKDLGGSLPEELNLIDFFCADNLPNYISYEGTEAAAKPRPEVWD

Query:  RQPLYTQVATGKWPLSKNYRSGASPVLPSSSGATGFDGGWRLSSNSDTLLDSKRPHNELHKLDCLDLSLRL
        RQPLYTQVATGKWPLSKNYRSGASPVLPSSSGATGFDGGWRLSSNSDTLLDSKRPHNELHKLDCLDLSLRL
Subjt:  RQPLYTQVATGKWPLSKNYRSGASPVLPSSSGATGFDGGWRLSSNSDTLLDSKRPHNELHKLDCLDLSLRL

XP_023548450.1 zinc finger protein 3-like [Cucurbita pepo subsp. pepo]9.1e-5255.65Show/hide
Query:  MDSPPEIKDPSDSKDISLELVSLDLSLSNKDLGGSL-PEELNLIDFFCADNLPNYISYEGTEAAAKPR--------------------------------
        MDSPPEIKDPSDSKDIS  LVSLD SLSNKDLGGSL PEELNLIDFF ADNLPN  S+EG EAAAKPR                                
Subjt:  MDSPPEIKDPSDSKDISLELVSLDLSLSNKDLGGSL-PEELNLIDFFCADNLPNYISYEGTEAAAKPR--------------------------------

Query:  ------------------------------------------------------PEVWDRQPLYTQVATGKWPLSKNYRSGASPVLPSSSGATGFDGGWR
                                                               +VWDRQPLYTQVA+G WPLS+NY+SGASPVLPSSSGA GFDGGWR
Subjt:  ------------------------------------------------------PEVWDRQPLYTQVATGKWPLSKNYRSGASPVLPSSSGATGFDGGWR

Query:  LSSNSDTLLDSKRPHNELHKLDCLDLSLRL
        LSSNSDTLLDSKRPHNELHKLDCLDLSLRL
Subjt:  LSSNSDTLLDSKRPHNELHKLDCLDLSLRL

XP_038896249.1 zinc finger protein 3-like [Benincasa hispida]4.2e-4147.1Show/hide
Query:  MSLPAKSEPETTSINSLADELPWLQQVSMDSPPEIKDPSDSKDISLELVSLDLSLSNKDLGGSL-PEELNLIDFFCADNLPNYISYEGT-EAAAKPRP--
        MSLPAKSE +TTSINSL DELPWLQ           DPSDSKD S ELVSLDL LSNKDLGGSL PEELNL+D F ADNLPN  SY+G  EAAAKPR   
Subjt:  MSLPAKSEPETTSINSLADELPWLQQVSMDSPPEIKDPSDSKDISLELVSLDLSLSNKDLGGSL-PEELNLIDFFCADNLPNYISYEGT-EAAAKPRP--

Query:  ------------------------------------------------------------------------------------EVWDRQPLYTQVATGK
                                                                                            EVW RQ LYTQVA G+
Subjt:  ------------------------------------------------------------------------------------EVWDRQPLYTQVATGK

Query:  WPLSKNYRSGASPVLPSSSGATGFDGGWRLSSNSDTLLDSKRPHNELHKLDCLDLSLRL
        WP  +NY SG SPV PSSSGA   D G  LS NSD+  DS   HNELH+LDCLDLSLRL
Subjt:  WPLSKNYRSGASPVLPSSSGATGFDGGWRLSSNSDTLLDSKRPHNELHKLDCLDLSLRL

TrEMBL top hitse value%identityAlignment
A0A0A0K8M2 C2H2-type domain-containing protein9.5e-3143.8Show/hide
Query:  PETTSINSLADELPWLQQVSMDSPPEIKDPSDSKDISLELVSLDLSLSNKDLGGSL----PEELNLIDFFCADNLPNYISYEGTEAAAKPRP--------
        PETTSINSLA ELPWLQ           DP+DSKD S ELVSL+  LSN +LGG L     EE NLIDFF ADNLPN   YEG EAAA+PR         
Subjt:  PETTSINSLADELPWLQQVSMDSPPEIKDPSDSKDISLELVSLDLSLSNKDLGGSL----PEELNLIDFFCADNLPNYISYEGTEAAAKPRP--------

Query:  -------------------------------------------------------------------EVWDRQPLYTQVATGKWPLSKNYRSGASPVLPS
                                                                           E   RQ LY QVA G+WP  KNY S  SPV PS
Subjt:  -------------------------------------------------------------------EVWDRQPLYTQVATGKWPLSKNYRSGASPVLPS

Query:  SSGATGFDGGWRLSSNSDTLLDSKRPHNELHKLDCLDLSLRL
        +SGAT    GW L  N+D+LLDS R  NELHKLDCLDLSL+L
Subjt:  SSGATGFDGGWRLSSNSDTLLDSKRPHNELHKLDCLDLSLRL

A0A1S3CEM5 zinc finger protein 18.6e-3243.57Show/hide
Query:  PETTSINSLADELPWLQQVSMDSPPEIKDPSDSKDISLELVSLDLSLSNKDLGGSL---PEELNLIDFFCADNLPNYISYEGTEAAAKPRP---------
        PETT INSLA+EL WLQ           DP+DSKD S ELVSLD  LSN +LGG L    EE NLIDFF ADNLPN  SYEG EAAA+PR          
Subjt:  PETTSINSLADELPWLQQVSMDSPPEIKDPSDSKDISLELVSLDLSLSNKDLGGSL---PEELNLIDFFCADNLPNYISYEGTEAAAKPRP---------

Query:  ------------------------------------------------------------------EVWDRQPLYTQVATGKWPLSKNYRSGASPVLPSS
                                                                          E  +RQ LY Q+A G+WP  KNY S  SPV PS+
Subjt:  ------------------------------------------------------------------EVWDRQPLYTQVATGKWPLSKNYRSGASPVLPSS

Query:  SGATGFDGGWRLSSNSDTLLDSKRPHNELHKLDCLDLSLRL
        SGAT    GW L   +D+LLDSKR  NELHKLDCLDLSL+L
Subjt:  SGATGFDGGWRLSSNSDTLLDSKRPHNELHKLDCLDLSLRL

A0A5D3CH42 Zinc finger protein 12.5e-3143.15Show/hide
Query:  PETTSINSLADELPWLQQVSMDSPPEIKDPSDSKDISLELVSLDLSLSNKDLGGSL---PEELNLIDFFCADNLPNYISYEGTEAAAKPRP---------
        PETT INSLA+EL WLQ           DP+DSKD S ELVSLD  LSN +LGG      EE NLIDFF ADNLPN  SYEG EAAA+PR          
Subjt:  PETTSINSLADELPWLQQVSMDSPPEIKDPSDSKDISLELVSLDLSLSNKDLGGSL---PEELNLIDFFCADNLPNYISYEGTEAAAKPRP---------

Query:  ------------------------------------------------------------------EVWDRQPLYTQVATGKWPLSKNYRSGASPVLPSS
                                                                          E  +RQ LY Q+A G+WP  KNY S  SPV PS+
Subjt:  ------------------------------------------------------------------EVWDRQPLYTQVATGKWPLSKNYRSGASPVLPSS

Query:  SGATGFDGGWRLSSNSDTLLDSKRPHNELHKLDCLDLSLRL
        SGAT    GW L   +D+LLDSKR  NELHKLDCLDLSL+L
Subjt:  SGATGFDGGWRLSSNSDTLLDSKRPHNELHKLDCLDLSLRL

A0A6J1DKR7 zinc finger protein 1-like1.1e-2339.08Show/hide
Query:  MSLPAKSE--PETTSINSLADELPWLQQVSMDSPPEIKDPSDSKDISLELVSLDLSLSNKDLGGSL-PEELNLIDFFCADNLPNYISYEGTEAAAKPRP-
        MS+PAKSE  PETTSI+   DELPWL+QV             SKDIS E VSLDL LSN+DL GSL PEELNLID F A  LP   S +G E  AKPR  
Subjt:  MSLPAKSE--PETTSINSLADELPWLQQVSMDSPPEIKDPSDSKDISLELVSLDLSLSNKDLGGSL-PEELNLIDFFCADNLPNYISYEGTEAAAKPRP-

Query:  --------------------------------------------------------------------------------------EVWDRQPLYTQVAT
                                                                                              +VWDRQ LYT++A 
Subjt:  --------------------------------------------------------------------------------------EVWDRQPLYTQVAT

Query:  GKWPLSKNYRSGASPVLPSSSGATGFDGGWRLSSNSDTLLDSKRPHNELHKLDCLDLSLRL
        G+ P  +++ SG S V  SS GA  FDGGW LS  S +L + K  H+ELH+LDCLDLSLRL
Subjt:  GKWPLSKNYRSGASPVLPSSSGATGFDGGWRLSSNSDTLLDSKRPHNELHKLDCLDLSLRL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCTTCCAGCAAAATCAGAGCCAGAAACTACCAGCATCAACTCATTGGCAGATGAACTTCCATGGCTGCAACAAGTTTCAATGGATAGCCCTCCAGAAATAAAAGA
TCCAAGTGACTCAAAAGACATAAGCCTTGAACTTGTTTCTCTCGATCTAAGCCTCTCAAACAAGGATTTGGGTGGGAGTTTGCCAGAAGAATTGAACCTAATTGACTTTT
TTTGTGCTGATAATTTACCAAACTACATTTCTTACGAAGGTACAGAAGCAGCAGCTAAGCCTCGACCTGAGGTCTGGGACAGACAGCCTCTTTACACGCAAGTGGCAACT
GGCAAATGGCCCTTGTCGAAGAATTATCGGTCGGGGGCCTCACCGGTACTGCCATCAAGCAGCGGAGCAACAGGTTTTGATGGTGGTTGGAGGCTGTCGTCAAACAGTGA
CACATTGTTGGATTCAAAGCGTCCTCATAATGAACTGCACAAGCTAGACTGTTTAGACTTGTCTTTGAGGCTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTCTTCCAGCAAAATCAGAGCCAGAAACTACCAGCATCAACTCATTGGCAGATGAACTTCCATGGCTGCAACAAGTTTCAATGGATAGCCCTCCAGAAATAAAAGA
TCCAAGTGACTCAAAAGACATAAGCCTTGAACTTGTTTCTCTCGATCTAAGCCTCTCAAACAAGGATTTGGGTGGGAGTTTGCCAGAAGAATTGAACCTAATTGACTTTT
TTTGTGCTGATAATTTACCAAACTACATTTCTTACGAAGGTACAGAAGCAGCAGCTAAGCCTCGACCTGAGGTCTGGGACAGACAGCCTCTTTACACGCAAGTGGCAACT
GGCAAATGGCCCTTGTCGAAGAATTATCGGTCGGGGGCCTCACCGGTACTGCCATCAAGCAGCGGAGCAACAGGTTTTGATGGTGGTTGGAGGCTGTCGTCAAACAGTGA
CACATTGTTGGATTCAAAGCGTCCTCATAATGAACTGCACAAGCTAGACTGTTTAGACTTGTCTTTGAGGCTGTAA
Protein sequenceShow/hide protein sequence
MSLPAKSEPETTSINSLADELPWLQQVSMDSPPEIKDPSDSKDISLELVSLDLSLSNKDLGGSLPEELNLIDFFCADNLPNYISYEGTEAAAKPRPEVWDRQPLYTQVAT
GKWPLSKNYRSGASPVLPSSSGATGFDGGWRLSSNSDTLLDSKRPHNELHKLDCLDLSLRL