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Carg18756 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18756
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein IQ-DOMAIN 14-like
Genome locationCarg_Chr08:4029391..4029772
RNA-Seq ExpressionCarg18756
SyntenyCarg18756
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593494.1 hypothetical protein SDJN03_12970, partial [Cucurbita argyrosperma subsp. sororia]1.2e-0845.22Show/hide
Query:  EHFDETR--------KIVYIIILRINSLDESPKIIKIDTYQIRSKSRRY-----NYGGDEVAPLQPISR-------------CCH---------LMDEDY
        E FDETR         I       INSLDESPKI++IDTY+ RSKSRRY      YGGDE APLQ I+               CH         LM ED 
Subjt:  EHFDETR--------KIVYIIILRINSLDESPKIIKIDTYQIRSKSRRY-----NYGGDEVAPLQPISR-------------CCH---------LMDEDY

Query:  KFPTACPNYQIHSPP
        KFPTA      HS P
Subjt:  KFPTACPNYQIHSPP

KAG7025840.1 hypothetical protein SDJN02_12338, partial [Cucurbita argyrosperma subsp. argyrosperma]6.8e-52100Show/hide
Query:  MSETLTLFPFLWNFQEHFDETRKIVYIIILRINSLDESPKIIKIDTYQIRSKSRRYNYGGDEVAPLQPISRCCHLMDEDYKFPTACPNYQIHSPPPACQ
        MSETLTLFPFLWNFQEHFDETRKIVYIIILRINSLDESPKIIKIDTYQIRSKSRRYNYGGDEVAPLQPISRCCHLMDEDYKFPTACPNYQIHSPPPACQ
Subjt:  MSETLTLFPFLWNFQEHFDETRKIVYIIILRINSLDESPKIIKIDTYQIRSKSRRYNYGGDEVAPLQPISRCCHLMDEDYKFPTACPNYQIHSPPPACQ

KAG7025841.1 Protein IQ-DOMAIN 31, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-0845.22Show/hide
Query:  EHFDETR--------KIVYIIILRINSLDESPKIIKIDTYQIRSKSRRY-----NYGGDEVAPLQPISR-------------CCH---------LMDEDY
        E FDETR         I       INSLDESPKI++IDTY+ RSKSRRY      YGGDE APLQ I+               CH         LM ED 
Subjt:  EHFDETR--------KIVYIIILRINSLDESPKIIKIDTYQIRSKSRRY-----NYGGDEVAPLQPISR-------------CCH---------LMDEDY

Query:  KFPTACPNYQIHSPP
        KFPTA      HS P
Subjt:  KFPTACPNYQIHSPP

XP_023000360.1 protein IQ-DOMAIN 14-like [Cucurbita maxima]2.7e-0844.35Show/hide
Query:  EHFDETR--------KIVYIIILRINSLDESPKIIKIDTYQIRSKSRRY-----NYGGDEVAPLQPISR-------------CCH---------LMDEDY
        + FDETR         I       INSLDESPKI++IDTY+ RSKSRRY      YGGDE APLQ I+               CH         LM ED 
Subjt:  EHFDETR--------KIVYIIILRINSLDESPKIIKIDTYQIRSKSRRY-----NYGGDEVAPLQPISR-------------CCH---------LMDEDY

Query:  KFPTACPNYQIHSPP
        KFPTA      HS P
Subjt:  KFPTACPNYQIHSPP

XP_023514899.1 protein IQ-DOMAIN 14-like [Cucurbita pepo subsp. pepo]6.1e-0844.35Show/hide
Query:  EHFDETR--------KIVYIIILRINSLDESPKIIKIDTYQIRSKSRRY-----NYGGDEVAPLQPISR-------------CCH---------LMDEDY
        E FDE R         I       INSLDESPKI++IDTY+ RSKSRRY      YGGDE APLQ I+               CH         LM ED 
Subjt:  EHFDETR--------KIVYIIILRINSLDESPKIIKIDTYQIRSKSRRY-----NYGGDEVAPLQPISR-------------CCH---------LMDEDY

Query:  KFPTACPNYQIHSPP
        KFPTA      HS P
Subjt:  KFPTACPNYQIHSPP

TrEMBL top hitse value%identityAlignment
A0A6J1CVX7 protein IQ-DOMAIN 146.8e-0541.74Show/hide
Query:  EHFDETRKIVYIIILR--------INSLDESPKIIKIDTYQIRSKSRRY------NYGGDEVAPLQPISR---C--------CH----------LMDEDY
        E FDE+R   +   L         INSLDESPKI++IDTY+ RS+SRR+        GGD+V PLQ IS    C        CH          LM +D 
Subjt:  EHFDETRKIVYIIILR--------INSLDESPKIIKIDTYQIRSKSRRY------NYGGDEVAPLQPISR---C--------CH----------LMDEDY

Query:  KFPTACPNYQIHSPP
        KFPTA      HS P
Subjt:  KFPTACPNYQIHSPP

A0A6J1GMR2 protein IQ-DOMAIN 14-like8.8e-0543.52Show/hide
Query:  EHFDETRKIVYIIIL----RINSLDESPKIIKIDTYQIR-SKSRRY-----NYGGDEVA----PLQPISR----CCH----------LMDEDYKFPTACP
        E FDETR   +   L     +NS+DESPKI++IDTY+ R S+SRRY       GGD+VA    PL  ++R     CH          LM ED KFPTA  
Subjt:  EHFDETRKIVYIIIL----RINSLDESPKIIKIDTYQIR-SKSRRY-----NYGGDEVA----PLQPISR----CCH----------LMDEDYKFPTACP

Query:  NYQIHSPP
            HS P
Subjt:  NYQIHSPP

A0A6J1HHA1 protein IQ-DOMAIN 14-like2.9e-0844.35Show/hide
Query:  EHFDETR--------KIVYIIILRINSLDESPKIIKIDTYQIRSKSRRY-----NYGGDEVAPLQPISR-------------CCH---------LMDEDY
        E  DETR         I       INSLDESPKI++IDTY+ RSKSRRY      YGGDE APLQ I+               CH         LM ED 
Subjt:  EHFDETR--------KIVYIIILRINSLDESPKIIKIDTYQIRSKSRRY-----NYGGDEVAPLQPISR-------------CCH---------LMDEDY

Query:  KFPTACPNYQIHSPP
        KFPTA      HS P
Subjt:  KFPTACPNYQIHSPP

A0A6J1JYQ7 protein IQ-DOMAIN 14-like8.8e-0542.59Show/hide
Query:  EHFDETRKIVYIIIL----RINSLDESPKIIKIDTYQIR-SKSRRY-----NYGGDEVA----PLQPISRCC--------------HLMDEDYKFPTACP
        E FDETR   +   L     +NS+DESPKI++IDTY+ R S+SRRY       GGD+VA    PL  ++R C               LM ED KFPTA  
Subjt:  EHFDETRKIVYIIIL----RINSLDESPKIIKIDTYQIR-SKSRRY-----NYGGDEVA----PLQPISRCC--------------HLMDEDYKFPTACP

Query:  NYQIHSPP
            HS P
Subjt:  NYQIHSPP

A0A6J1KFN9 protein IQ-DOMAIN 14-like1.3e-0844.35Show/hide
Query:  EHFDETR--------KIVYIIILRINSLDESPKIIKIDTYQIRSKSRRY-----NYGGDEVAPLQPISR-------------CCH---------LMDEDY
        + FDETR         I       INSLDESPKI++IDTY+ RSKSRRY      YGGDE APLQ I+               CH         LM ED 
Subjt:  EHFDETR--------KIVYIIILRINSLDESPKIIKIDTYQIRSKSRRY-----NYGGDEVAPLQPISR-------------CCH---------LMDEDY

Query:  KFPTACPNYQIHSPP
        KFPTA      HS P
Subjt:  KFPTACPNYQIHSPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGAAACTCTAACTTTGTTCCCATTTCTTTGGAATTTTCAAGAACATTTTGATGAAACAAGAAAAATTGTTTATATCATAATCTTACGCATCAACTCATTGGATGA
GAGCCCAAAAATCATCAAAATCGATACCTATCAAATTCGATCAAAGTCTCGTAGGTACAATTACGGAGGAGACGAAGTAGCACCTCTCCAACCAATCTCTCGTTGTTGCC
ATTTGATGGACGAAGACTACAAGTTCCCTACAGCATGTCCCAACTATCAAATTCATTCGCCTCCACCAGCATGCCAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGAAACTCTAACTTTGTTCCCATTTCTTTGGAATTTTCAAGAACATTTTGATGAAACAAGAAAAATTGTTTATATCATAATCTTACGCATCAACTCATTGGATGA
GAGCCCAAAAATCATCAAAATCGATACCTATCAAATTCGATCAAAGTCTCGTAGGTACAATTACGGAGGAGACGAAGTAGCACCTCTCCAACCAATCTCTCGTTGTTGCC
ATTTGATGGACGAAGACTACAAGTTCCCTACAGCATGTCCCAACTATCAAATTCATTCGCCTCCACCAGCATGCCAGTGA
Protein sequenceShow/hide protein sequence
MSETLTLFPFLWNFQEHFDETRKIVYIIILRINSLDESPKIIKIDTYQIRSKSRRYNYGGDEVAPLQPISRCCHLMDEDYKFPTACPNYQIHSPPPACQ