; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg18780 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18780
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptioncytochrome c oxidase assembly protein COX19-like
Genome locationCarg_Chr08:3918330..3920572
RNA-Seq ExpressionCarg18780
SyntenyCarg18780
Gene Ontology termsNA
InterPro domainsIPR009069 - Cysteine alpha-hairpin motif superfamily
IPR010625 - CHCH


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593473.1 hypothetical protein SDJN03_12949, partial [Cucurbita argyrosperma subsp. sororia]4.9e-4798.95Show/hide
Query:  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQCRMEKNLMAKQDMEELGFGNLSQPSLSGDKLEQV
        MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQCRMEKNLMAKQDM ELGFGNLSQPSLSGDKLEQV
Subjt:  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQCRMEKNLMAKQDMEELGFGNLSQPSLSGDKLEQV

KAG7025816.1 COX19-2, partial [Cucurbita argyrosperma subsp. argyrosperma]9.8e-48100Show/hide
Query:  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQCRMEKNLMAKQDMEELGFGNLSQPSLSGDKLEQV
        MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQCRMEKNLMAKQDMEELGFGNLSQPSLSGDKLEQV
Subjt:  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQCRMEKNLMAKQDMEELGFGNLSQPSLSGDKLEQV

XP_022964208.1 cytochrome c oxidase assembly protein COX19-like isoform X1 [Cucurbita moschata]2.0e-4598.91Show/hide
Query:  GGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQCRMEKNLMAKQDMEELGFGNLSQPSLSGDKLEQV
        GGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQCRMEKNLMAKQDM ELGFGNLSQPSLSGDKLEQV
Subjt:  GGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQCRMEKNLMAKQDMEELGFGNLSQPSLSGDKLEQV

XP_022964209.1 cytochrome c oxidase assembly protein COX19-like isoform X2 [Cucurbita moschata]4.9e-4798.95Show/hide
Query:  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQCRMEKNLMAKQDMEELGFGNLSQPSLSGDKLEQV
        MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQCRMEKNLMAKQDM ELGFGNLSQPSLSGDKLEQV
Subjt:  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQCRMEKNLMAKQDMEELGFGNLSQPSLSGDKLEQV

XP_023000411.1 cytochrome c oxidase assembly protein COX19-like isoform X2 [Cucurbita maxima]1.9e-4697.89Show/hide
Query:  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQCRMEKNLMAKQDMEELGFGNLSQPSLSGDKLEQV
        MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQCRMEKNLMAKQDM ELGFGNLSQPSL GDKLEQV
Subjt:  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQCRMEKNLMAKQDMEELGFGNLSQPSLSGDKLEQV

TrEMBL top hitse value%identityAlignment
A0A5A7UTU4 Cytochrome c oxidase assembly protein COX19-like5.4e-4491.58Show/hide
Query:  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQCRMEKNLMAKQDMEELGFGNLSQPSLSGDKLEQV
        MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGH+SEKCRHLSKKYL+CRMEKNLMAKQDM ELGFG++SQ +LSGDKLEQ+
Subjt:  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQCRMEKNLMAKQDMEELGFGNLSQPSLSGDKLEQV

A0A6J1HK56 cytochrome c oxidase assembly protein COX19-like isoform X19.9e-4698.91Show/hide
Query:  GGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQCRMEKNLMAKQDMEELGFGNLSQPSLSGDKLEQV
        GGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQCRMEKNLMAKQDM ELGFGNLSQPSLSGDKLEQV
Subjt:  GGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQCRMEKNLMAKQDMEELGFGNLSQPSLSGDKLEQV

A0A6J1HMG5 cytochrome c oxidase assembly protein COX19-like isoform X22.4e-4798.95Show/hide
Query:  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQCRMEKNLMAKQDMEELGFGNLSQPSLSGDKLEQV
        MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQCRMEKNLMAKQDM ELGFGNLSQPSLSGDKLEQV
Subjt:  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQCRMEKNLMAKQDMEELGFGNLSQPSLSGDKLEQV

A0A6J1KFT4 cytochrome c oxidase assembly protein COX19-like isoform X29.0e-4797.89Show/hide
Query:  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQCRMEKNLMAKQDMEELGFGNLSQPSLSGDKLEQV
        MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQCRMEKNLMAKQDM ELGFGNLSQPSL GDKLEQV
Subjt:  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQCRMEKNLMAKQDMEELGFGNLSQPSLSGDKLEQV

A0A6J1KI94 cytochrome c oxidase assembly protein COX19-like isoform X13.8e-4597.83Show/hide
Query:  GGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQCRMEKNLMAKQDMEELGFGNLSQPSLSGDKLEQV
        GGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQCRMEKNLMAKQDM ELGFGNLSQPSL GDKLEQV
Subjt:  GGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQCRMEKNLMAKQDMEELGFGNLSQPSLSGDKLEQV

SwissProt top hitse value%identityAlignment
A8E4L1 Cytochrome c oxidase assembly protein COX192.3e-1545.12Show/hide
Query:  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQCRMEKNLMAKQDMEELGFGNL
        MS   +F G++  +P PP+KG FPLDH   C   K++++ CL+ +  ++  CR+ SK+YL+CRME+ LMA++ +E+LGFG+L
Subjt:  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQCRMEKNLMAKQDMEELGFGNL

O14056 Cytochrome c oxidase assembly protein cox19, mitochondrial1.9e-1447.78Show/hide
Query:  SFGGNRGLRPV----PPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQCRMEKNLMAKQDMEELGF---GNLSQPSLS
        SFG   G  P+    PPE+G FPLDH   C    K+YL C+K      E+CR L+KKYLQCRM+  L  K DM+ LGF    N +  SLS
Subjt:  SFGGNRGLRPV----PPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQCRMEKNLMAKQDMEELGF---GNLSQPSLS

P0CM87 Cytochrome c oxidase assembly protein COX197.4e-1447.95Show/hide
Query:  RPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQCRMEKNLMAKQDMEELGFGNLSQPS
        +P PP +G FPLDH   C      YL C+K + + + KCR  SK+YL+CRM+K LMA+ DM  LG G++  PS
Subjt:  RPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQCRMEKNLMAKQDMEELGFGNLSQPS

Q49B96 Cytochrome c oxidase assembly protein COX191.5e-1443.37Show/hide
Query:  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQCRMEKNLMAKQDMEELGFGNLS
        MS   +F G +  +P PP+KG FPLDH+  C   K++++ CL  +  ++  CR  SK+YL+CRME+ LM ++ +E+LGFG+L+
Subjt:  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQCRMEKNLMAKQDMEELGFGNLS

Q4P821 Cytochrome c oxidase assembly protein COX196.7e-1548Show/hide
Query:  PPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQCRMEKNLMAKQDMEELGFGNLSQPSLSGDK
        PPE+G FPLDH   C    +EY+NC+K + + + KCRHLS+ YLQCRM+K LM + +M+ LGF ++  P+ +  K
Subjt:  PPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQCRMEKNLMAKQDMEELGFGNLSQPSLSGDK

Arabidopsis top hitse value%identityAlignment
AT1G66590.1 cytochrome c oxidase 19-11.4e-3673.63Show/hide
Query:  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQCRMEKNLMAKQDMEELGFGNLSQPSLSGDK
        MS GG+FGGNRGLRP+PPEKG+FPLDH+H CD EKKEYL CLK+S H+SE+CRHLSKKYLQCRM KNLMAKQDM ELGF  + +   + DK
Subjt:  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQCRMEKNLMAKQDMEELGFGNLSQPSLSGDK

AT1G66590.2 cytochrome c oxidase 19-17.0e-3674.16Show/hide
Query:  AGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQCRMEKNLMAKQDMEELGFGNLSQPSLSGDK
        AGG+FGGNRGLRP+PPEKG+FPLDH+H CD EKKEYL CLK+S H+SE+CRHLSKKYLQCRM KNLMAKQDM ELGF  + +   + DK
Subjt:  AGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQCRMEKNLMAKQDMEELGFGNLSQPSLSGDK

AT1G69750.1 cytochrome c oxidase 19-21.4e-3673.63Show/hide
Query:  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQCRMEKNLMAKQDMEELGFGNLSQPSLSGDK
        MS GG+FGGNRGLRP+PPEKG+FPLDH+H CD EKKEYL CLK+S H+SE+CRHLSKKYLQCRM KNLMAKQDM ELGF  + +   + DK
Subjt:  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQCRMEKNLMAKQDMEELGFGNLSQPSLSGDK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGCAGGTGGTTCCTTTGGGGGGAATAGAGGATTGAGACCGGTACCCCCAGAAAAAGGAGTCTTCCCTTTGGATCATATGCACCTCTGCGACCTGGAGAAGAAAGA
ATACCTCAATTGTCTTAAAACGTCTGGTCACCAATCTGAAAAATGCAGGCACTTATCAAAAAAATACCTTCAATGTCGTATGGAAAAGAATTTAATGGCAAAGCAAGACA
TGGAAGAACTAGGATTCGGGAATTTGAGTCAGCCCAGTTTGTCTGGCGATAAATTGGAACAAGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGCAGGTGGTTCCTTTGGGGGGAATAGAGGATTGAGACCGGTACCCCCAGAAAAAGGAGTCTTCCCTTTGGATCATATGCACCTCTGCGACCTGGAGAAGAAAGA
ATACCTCAATTGTCTTAAAACGTCTGGTCACCAATCTGAAAAATGCAGGCACTTATCAAAAAAATACCTTCAATGTCGTATGGAAAAGAATTTAATGGCAAAGCAAGACA
TGGAAGAACTAGGATTCGGGAATTTGAGTCAGCCCAGTTTGTCTGGCGATAAATTGGAACAAGTTTAA
Protein sequenceShow/hide protein sequence
MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQCRMEKNLMAKQDMEELGFGNLSQPSLSGDKLEQV