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Carg18792 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18792
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTCP domain-containing protein
Genome locationCarg_Chr08:3862611..3865345
RNA-Seq ExpressionCarg18792
SyntenyCarg18792
Gene Ontology termsGO:0050789 - regulation of biological process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4091996.1 unnamed protein product [Lactuca saligna]7.9e-0757.97Show/hide
Query:  SPIAASATSSVNTSGVLVTLIPFSRHFGKSILSSPTLKLATISNAGKVSIKLASAPILVIGV-ERMNPE
        +PIA  ATSSV+TSGVL+TLIPF     +S LS+PTLKL TIS AG  SI   SAP L   +  R+ PE
Subjt:  SPIAASATSSVNTSGVLVTLIPFSRHFGKSILSSPTLKLATISNAGKVSIKLASAPILVIGV-ERMNPE

KAF7822241.1 U3 small nucleolar RNA-associated protein 18-like protein [Senna tora]2.4e-0856.96Show/hide
Query:  SATSSVNTSGVLVTLIPFSRHFGKSILSSPTLKLATISNAGK--VSIKLASAPILVIGVERMNPELEEIEALFKLFFEI
        S TSSVNTSGV VT IPFS H  KSI S+PTLKL  IS+ GK  +S   ASA +    +E + PE EE+EAL KL  E+
Subjt:  SATSSVNTSGVLVTLIPFSRHFGKSILSSPTLKLATISNAGK--VSIKLASAPILVIGVERMNPELEEIEALFKLFFEI

KAG7025805.1 hypothetical protein SDJN02_12303, partial [Cucurbita argyrosperma subsp. argyrosperma]8.1e-36100Show/hide
Query:  MASPIAASATSSVNTSGVLVTLIPFSRHFGKSILSSPTLKLATISNAGKVSIKLASAPILVIGVERMNPELEEIEALFKLFFEILFSIY
        MASPIAASATSSVNTSGVLVTLIPFSRHFGKSILSSPTLKLATISNAGKVSIKLASAPILVIGVERMNPELEEIEALFKLFFEILFSIY
Subjt:  MASPIAASATSSVNTSGVLVTLIPFSRHFGKSILSSPTLKLATISNAGKVSIKLASAPILVIGVERMNPELEEIEALFKLFFEILFSIY

PLY78083.1 hypothetical protein LSAT_1X4641 [Lactuca sativa]6.0e-0756.41Show/hide
Query:  SPIAASATSSVNTSGVLVTLIPFSRHFGKSILSSPTLKLATISNAGKVSIKLASAPILVIGVERMNPELEEIEALFKL
        +PIA SATSSVNTSGVLVTLIPF     KS  S+PTLKL TI  AG  SI   SAP L        P    IE  F L
Subjt:  SPIAASATSSVNTSGVLVTLIPFSRHFGKSILSSPTLKLATISNAGKVSIKLASAPILVIGVERMNPELEEIEALFKL

PLY83525.1 hypothetical protein LSAT_8X122100 [Lactuca sativa]2.4e-0858.44Show/hide
Query:  SPIAASATSSVNTSGVLVTLIPFSRHFGKSILSSPTLKLATISNAGKVSIKLASAPILVI-GVERMNPELEEIEALF
        +PIA SATSSVNTSGVLVTLIPF     KS LS+PTLKL TIS AG  SI   SAP L      R+ PE    ++ F
Subjt:  SPIAASATSSVNTSGVLVTLIPFSRHFGKSILSSPTLKLATISNAGKVSIKLASAPILVI-GVERMNPELEEIEALF

TrEMBL top hitse value%identityAlignment
A0A2J6KSN2 TCP domain-containing protein2.9e-0756.41Show/hide
Query:  SPIAASATSSVNTSGVLVTLIPFSRHFGKSILSSPTLKLATISNAGKVSIKLASAPILVIGVERMNPELEEIEALFKL
        +PIA SATSSVNTSGVLVTLIPF     KS  S+PTLKL TI  AG  SI   SAP L        P    IE  F L
Subjt:  SPIAASATSSVNTSGVLVTLIPFSRHFGKSILSSPTLKLATISNAGKVSIKLASAPILVIGVERMNPELEEIEALFKL

A0A2J6L866 TCP domain-containing protein1.2e-0858.44Show/hide
Query:  SPIAASATSSVNTSGVLVTLIPFSRHFGKSILSSPTLKLATISNAGKVSIKLASAPILVI-GVERMNPELEEIEALF
        +PIA SATSSVNTSGVLVTLIPF     KS LS+PTLKL TIS AG  SI   SAP L      R+ PE    ++ F
Subjt:  SPIAASATSSVNTSGVLVTLIPFSRHFGKSILSSPTLKLATISNAGKVSIKLASAPILVI-GVERMNPELEEIEALF

A0A2P2NPS4 Uncharacterized protein3.5e-0866.67Show/hide
Query:  AASATSSVNTSGVLVTLIPFSRHFGKSILSSPTLKLATISNAGKVSIKLASAPILVI
        + SATSSV T GVLVTLIPFS HF KSILS+PTL++AT S  G+ SI    APILV+
Subjt:  AASATSSVNTSGVLVTLIPFSRHFGKSILSSPTLKLATISNAGKVSIKLASAPILVI

A0A6S7MV07 TCP domain-containing protein3.8e-0757.97Show/hide
Query:  SPIAASATSSVNTSGVLVTLIPFSRHFGKSILSSPTLKLATISNAGKVSIKLASAPILVIGV-ERMNPE
        +PIA  ATSSV+TSGVL+TLIPF     +S LS+PTLKL TIS AG  SI   SAP L   +  R+ PE
Subjt:  SPIAASATSSVNTSGVLVTLIPFSRHFGKSILSSPTLKLATISNAGKVSIKLASAPILVIGV-ERMNPE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAGTCCAATTGCGGCATCCGCAACATCGTCGGTCAACACATCGGGTGTATTAGTAACCCTAATTCCCTTCTCCCGGCACTTCGGCAAATCAATTTTGTCTAGTCC
CACACTGAAGCTCGCTACGATTTCCAACGCCGGAAAAGTGTCGATTAAATTGGCGTCGGCGCCGATCTTGGTAATCGGAGTTGAGAGGATGAATCCAGAGCTTGAAGAGA
TTGAAGCGTTGTTCAAGCTGTTTTTCGAGATTCTTTTTTCTATTTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAGTCCAATTGCGGCATCCGCAACATCGTCGGTCAACACATCGGGTGTATTAGTAACCCTAATTCCCTTCTCCCGGCACTTCGGCAAATCAATTTTGTCTAGTCC
CACACTGAAGCTCGCTACGATTTCCAACGCCGGAAAAGTGTCGATTAAATTGGCGTCGGCGCCGATCTTGGTAATCGGAGTTGAGAGGATGAATCCAGAGCTTGAAGAGA
TTGAAGCGTTGTTCAAGCTGTTTTTCGAGATTCTTTTTTCTATTTATTAA
Protein sequenceShow/hide protein sequence
MASPIAASATSSVNTSGVLVTLIPFSRHFGKSILSSPTLKLATISNAGKVSIKLASAPILVIGVERMNPELEEIEALFKLFFEILFSIY