; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg18793 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18793
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionDynein light chain
Genome locationCarg_Chr08:3860253..3861279
RNA-Seq ExpressionCarg18793
SyntenyCarg18793
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0030286 - dynein complex (cellular component)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsIPR001372 - Dynein light chain, type 1/2
IPR037177 - Dynein light chain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011659570.1 dynein light chain LC6, flagellar outer arm [Cucumis sativus]9.6e-4394.68Show/hide
Query:  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVTSS
        MLEGKA VQDTDMP KMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFD++YGSGWQCVVGSNFGCFFTHSKGSFIYFKL TLNFLIFKGVTSS
Subjt:  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVTSS

XP_022964212.1 dynein light chain LC6, flagellar outer arm-like isoform X1 [Cucurbita moschata]1.3e-47100Show/hide
Query:  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVTSSPQ
        MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVTSSPQ
Subjt:  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVTSSPQ

XP_022964213.1 dynein light chain LC6, flagellar outer arm-like isoform X2 [Cucurbita moschata]3.0e-4498.9Show/hide
Query:  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLGTLNFLIFKGV
        MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLGTLNFLIFKG+
Subjt:  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLGTLNFLIFKGV

XP_023513963.1 dynein light chain LC6, flagellar outer arm-like [Cucurbita pepo subsp. pepo]2.9e-4798.96Show/hide
Query:  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVTSSPQ
        MLEGKASVQDTDMP+KMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVTSSPQ
Subjt:  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVTSSPQ

XP_038897874.1 dynein light chain LC6, flagellar outer arm-like [Benincasa hispida]5.6e-4394.68Show/hide
Query:  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVTSS
        MLEGKA +QDTDMP KMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFD+RYGSGWQCVVGSNFGCFFTHSKGSFIYFKL TLNFLIFKGVTSS
Subjt:  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVTSS

TrEMBL top hitse value%identityAlignment
A0A0A0K947 Dynein light chain4.7e-4394.68Show/hide
Query:  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVTSS
        MLEGKA VQDTDMP KMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFD++YGSGWQCVVGSNFGCFFTHSKGSFIYFKL TLNFLIFKGVTSS
Subjt:  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVTSS

A0A5A7UW48 Dynein light chain4.7e-4394.68Show/hide
Query:  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVTSS
        MLEGKA VQDTDMP KMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFD++YGSGWQCVVGSNFGCFFTHSKGSFIYFKL TLNFLIFKGVTSS
Subjt:  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVTSS

A0A6J1HH84 Dynein light chain6.3e-48100Show/hide
Query:  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVTSSPQ
        MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVTSSPQ
Subjt:  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVTSSPQ

A0A6J1HK61 Dynein light chain1.4e-4498.9Show/hide
Query:  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLGTLNFLIFKGV
        MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLGTLNFLIFKG+
Subjt:  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLGTLNFLIFKGV

A0A6J1KDK4 Dynein light chain6.3e-48100Show/hide
Query:  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVTSSPQ
        MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVTSSPQ
Subjt:  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVTSSPQ

SwissProt top hitse value%identityAlignment
O02414 Dynein light chain LC6, flagellar outer arm8.0e-1647.19Show/hide
Query:  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLGTLNFLIFK
        M E KA +++ DMP  MQ  A+D A++AL+ +++   K IAA+IKK+FD +Y   W C+VG NFG + TH    FIYF LG +  L+FK
Subjt:  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLGTLNFLIFK

P61285 Dynein light chain 1, cytoplasmic2.3e-1544.94Show/hide
Query:  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLGTLNFLIFK
        M + KA +++ DM  +MQ  +++ A++AL+ Y++   K IAAHIKK+FD +Y   W C+VG NFG + TH    FIYF LG +  L+FK
Subjt:  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLGTLNFLIFK

P63167 Dynein light chain 1, cytoplasmic2.3e-1544.94Show/hide
Query:  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLGTLNFLIFK
        M + KA +++ DM  +MQ  +++ A++AL+ Y++   K IAAHIKK+FD +Y   W C+VG NFG + TH    FIYF LG +  L+FK
Subjt:  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLGTLNFLIFK

Q22799 Dynein light chain 1, cytoplasmic1.8e-1546.07Show/hide
Query:  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLGTLNFLIFK
        M++ KA +++ DM   MQ  A+D A++AL+ Y++   K IAA+IKK+FD +Y   W C+VG NFG + TH    FIYF LG +  L+FK
Subjt:  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLGTLNFLIFK

Q24117 Dynein light chain 1, cytoplasmic2.3e-1546.07Show/hide
Query:  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLGTLNFLIFK
        M + KA +++ DM  +MQ  A+D A++AL+ Y++   K IAA+IKK+FD +Y   W C+VG NFG + TH    FIYF LG +  L+FK
Subjt:  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLGTLNFLIFK

Arabidopsis top hitse value%identityAlignment
AT1G52240.1 RHO guanyl-nucleotide exchange factor 114.5e-2279.66Show/hide
Query:  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCV
        MLEGKA V+D+DMP KMQ+QAM  AS+ALDL+DVFDCKSIA HIKK+FD RYGSGWQCV
Subjt:  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCV

AT1G52240.2 RHO guanyl-nucleotide exchange factor 116.9e-3979.57Show/hide
Query:  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVTS
        MLEGKA V+D+DMP KMQ+QAM  AS+ALDL+DVFDCKSIA HIKK+FD RYGSGWQCVVGSNFGCFFTHSKG+FIYF+L TL FLIFKG ++
Subjt:  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVTS

AT3G16120.1 Dynein light chain type 1 family protein1.2e-3880.43Show/hide
Query:  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVT
        MLEGKA V++TDMP KMQ+QAM  AS++LDL+DVFD  SIAAHIKK+FD RYGSGWQCVVG+NFGCFFTHSKG+FIYF LGTLNFLIFKG T
Subjt:  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVT

AT4G27360.1 Dynein light chain type 1 family protein2.8e-2454.74Show/hide
Query:  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVTSSP
        MLEGKA + DTDM   M+  A+  ASKALD +DV +   IA  IKK+FD  YGSGWQC+VG++FG F TH  G FI+F +G+L  L+FKG    P
Subjt:  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVTSSP

AT5G20110.1 Dynein light chain type 1 family protein3.1e-1548.72Show/hide
Query:  DMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLGTLNFLIFK
        DMP  MQ  A   A   LD  + F  K +A ++KK+FD  YG  W C+VGS+FG F THS G FIYF +  L  L+FK
Subjt:  DMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLGTLNFLIFK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGAAGGCAAAGCTTCGGTACAGGACACAGATATGCCTAGCAAGATGCAGATCCAAGCCATGGACGCTGCGTCTAAAGCTCTGGATCTCTATGATGTTTTCGATTG
CAAATCCATTGCTGCCCACATAAAAAAGGATTTTGACCACAGATATGGGAGCGGATGGCAATGTGTGGTGGGTTCAAATTTTGGTTGTTTCTTCACCCACTCCAAGGGGT
CTTTCATCTACTTCAAACTGGGGACTCTCAACTTTCTCATCTTCAAAGGGGTGACATCTTCGCCCCAGTGA
mRNA sequenceShow/hide mRNA sequence
AGAGGGGATTCCAGAGTTTTTCGTTGTTTAAAATCATCGTCCATTTGCGTCCTTCTTATATCTGTGTTTGATTTTACTCCTGGAAGAACGAAACACTCGAGATTGGTAAA
ATCTTTTCTGGATTTTGAAGATAAGACGCGAAGAGATCGGCGAGAACAAATCCCAGACAGTTTTCTGTTTTTAGAAAAGGGCTAAAGGATGTTGGAAGGCAAAGCTTCGG
TACAGGACACAGATATGCCTAGCAAGATGCAGATCCAAGCCATGGACGCTGCGTCTAAAGCTCTGGATCTCTATGATGTTTTCGATTGCAAATCCATTGCTGCCCACATA
AAAAAGGATTTTGACCACAGATATGGGAGCGGATGGCAATGTGTGGTGGGTTCAAATTTTGGTTGTTTCTTCACCCACTCCAAGGGGTCTTTCATCTACTTCAAACTGGG
GACTCTCAACTTTCTCATCTTCAAAGGGGTGACATCTTCGCCCCAGTGATTTGAGTTGTGTTTTCTCTATATATGAATCTCTAGAGAGCTTGGGAAGCTGGAAAGAGAGA
GAGTAAAGGAAGGTGTTTTCCTTTTCTATGGCTAGGTCAATTCGATTGGAAGGGAAAGATCAAACCAATGTAAGGGAGATGATAGGAAGTGTCCAAATTACATTATGGGA
TTGTTTGAAGGTTTATGTTCAAAATGCTTTTGATGCTTTTGTGGGTATACTCTGTAAATATTGAAATCCCGGGGAGACACTTCTTAATCCTATTCGAATAACTTTCATTG
TCCCTTTTCTAAATTTCTATTTTCTGCCAAGAAATGCTAACTGTTGGATAAAGAAATCAATTACTGGCAACGACCTCCTTGTTGACTCGAATGGTCAGAAAT
Protein sequenceShow/hide protein sequence
MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVTSSPQ