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Carg18798 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18798
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRibosomal protein L37
Genome locationCarg_Chr08:3840716..3841644
RNA-Seq ExpressionCarg18798
SyntenyCarg18798
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR011331 - Ribosomal protein L37ae/L37e


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA3489293.1 60S ribosomal protein L37-3 [Gossypium australe]5.2e-2371.88Show/hide
Query:  RVRVREVLVRGGTRPILSVCGAAAAASISRRVGVQHVLSLL--PASENNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTEAAPRNKGAAASA
        R R + VLV+ GTRP LS    AA ASISRR     VLSLL      NNWSVKAIRRKTTGTGRMRY+RHVPRRFK+GFREGTEAAPR K AAASA
Subjt:  RVRVREVLVRGGTRPILSVCGAAAAASISRRVGVQHVLSLL--PASENNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTEAAPRNKGAAASA

KAB1218567.1 60S ribosomal protein L37 [Morella rubra]7.2e-2567.29Show/hide
Query:  LIYRVRVREVLVRGGTRPILSVCGAAAAASISRRVGVQHVLSLLPA----------SENNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTEAAPRN
        LI RVR +  LVRGGTRP     G AAAASISRRV    V   LPA          +++NWSVKAIRRKTTGTGRMRY+RH+PRRFKSGFREGTEAAPR 
Subjt:  LIYRVRVREVLVRGGTRPILSVCGAAAAASISRRVGVQHVLSLLPA----------SENNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTEAAPRN

Query:  KGAAASA
        KGAAA+A
Subjt:  KGAAASA

KAG7025798.1 60S ribosomal protein L37-2, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-44100Show/hide
Query:  LARLIYRVRVREVLVRGGTRPILSVCGAAAAASISRRVGVQHVLSLLPASENNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTEAAPRNKGAAASA
        LARLIYRVRVREVLVRGGTRPILSVCGAAAAASISRRVGVQHVLSLLPASENNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTEAAPRNKGAAASA
Subjt:  LARLIYRVRVREVLVRGGTRPILSVCGAAAAASISRRVGVQHVLSLLPASENNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTEAAPRNKGAAASA

OIW03817.1 hypothetical protein TanjilG_30093 [Lupinus angustifolius]3.7e-2169.47Show/hide
Query:  YRVRVREVLVRGGTRPILSVCGAAAAASISRRVGVQHVLSLLPASENNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTEAAPRNKGAAASA
        +R R + V VRG TRP LSV G AAAAS S+RV     L+L PA  N     AIRRKTTGTGRMRY+RHVPRRFKSGFREGTEAAPR KGAAA+A
Subjt:  YRVRVREVLVRGGTRPILSVCGAAAAASISRRVGVQHVLSLLPASENNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTEAAPRNKGAAASA

PPD83667.1 hypothetical protein GOBAR_DD19392 [Gossypium barbadense]1.3e-2165.38Show/hide
Query:  RVRVREVLVRGGTRPILSVCGAAAAASISRRVGVQHVLSLLPA----------SENNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTEAAPRNKGA
        R R + VLV+ GTRP LS  G  A ASISRRV    VLSLL +            +NWSVKA RRKTTGTGRMRY+ HVPRRFK+GFREGTEAAPRNK A
Subjt:  RVRVREVLVRGGTRPILSVCGAAAAASISRRVGVQHVLSLLPA----------SENNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTEAAPRNKGA

Query:  AASA
        AASA
Subjt:  AASA

TrEMBL top hitse value%identityAlignment
A0A4D6N8F2 Large subunit ribosomal protein L37e6.4e-1966.67Show/hide
Query:  LVRGGTRPILSVCGAAAAASISRRVGVQHVLSLLPASENNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTEAAPRNKGAAASA
        LVRGGTRP  SV   A A S SR+               NWSVKAIRRKTTGTGRMRY+RHVPRRFKSGFREGTEAAPR +GAA +A
Subjt:  LVRGGTRPILSVCGAAAAASISRRVGVQHVLSLLPASENNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTEAAPRNKGAAASA

A0A4P1R754 Uncharacterized protein1.8e-2169.47Show/hide
Query:  YRVRVREVLVRGGTRPILSVCGAAAAASISRRVGVQHVLSLLPASENNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTEAAPRNKGAAASA
        +R R + V VRG TRP LSV G AAAAS S+RV     L+L PA  N     AIRRKTTGTGRMRY+RHVPRRFKSGFREGTEAAPR KGAAA+A
Subjt:  YRVRVREVLVRGGTRPILSVCGAAAAASISRRVGVQHVLSLLPASENNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTEAAPRNKGAAASA

A0A5B6X6B2 60S ribosomal protein L37-32.5e-2371.88Show/hide
Query:  RVRVREVLVRGGTRPILSVCGAAAAASISRRVGVQHVLSLL--PASENNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTEAAPRNKGAAASA
        R R + VLV+ GTRP LS    AA ASISRR     VLSLL      NNWSVKAIRRKTTGTGRMRY+RHVPRRFK+GFREGTEAAPR K AAASA
Subjt:  RVRVREVLVRGGTRPILSVCGAAAAASISRRVGVQHVLSLL--PASENNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTEAAPRNKGAAASA

A0A5C7IJ18 Uncharacterized protein6.8e-2162.73Show/hide
Query:  YRVRVREVLVRGGTRPILSVCGAAAAASISRRVGVQHVLSLLPASEN---------------NWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTEAA
        YR R + VLVRGGTR  L V  AA AASI RRV    V   L A E+               NWSVKAIRRKTTGTGRM+Y+R+VPRRFKSGFREGTEAA
Subjt:  YRVRVREVLVRGGTRPILSVCGAAAAASISRRVGVQHVLSLLPASEN---------------NWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTEAA

Query:  PRNKGAAASA
        PR KGAAA+A
Subjt:  PRNKGAAASA

A0A6A1W379 60S ribosomal protein L373.5e-2567.29Show/hide
Query:  LIYRVRVREVLVRGGTRPILSVCGAAAAASISRRVGVQHVLSLLPA----------SENNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTEAAPRN
        LI RVR +  LVRGGTRP     G AAAASISRRV    V   LPA          +++NWSVKAIRRKTTGTGRMRY+RH+PRRFKSGFREGTEAAPR 
Subjt:  LIYRVRVREVLVRGGTRPILSVCGAAAAASISRRVGVQHVLSLLPA----------SENNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTEAAPRN

Query:  KGAAASA
        KGAAA+A
Subjt:  KGAAASA

SwissProt top hitse value%identityAlignment
P49212 60S ribosomal protein L37 (Fragment)2.4e-1581.25Show/hide
Query:  NWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTEAAPRNKGAAASA
        NWSVKA+RRKTTGTGRMRY+R+VPRRFK+ FREGTEAAPR KG AA++
Subjt:  NWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTEAAPRNKGAAASA

Q43292 60S ribosomal protein L37-29.8e-1787.5Show/hide
Query:  NWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTEAAPRNKGAAASA
        NWSVKAIRRKTTGTGRMRY+R+VPRRFK+GFREGTEA PRNKG A+SA
Subjt:  NWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTEAAPRNKGAAASA

Q8LEM8 60S ribosomal protein L37-31.4e-1583.33Show/hide
Query:  NWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTEAAPRNKGAAASA
        NWSVKAIRRKTTGTGRMRY+R+VPRRFK+GFREGTEA PR+K +A+SA
Subjt:  NWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTEAAPRNKGAAASA

Q8LFH7 60S ribosomal protein L37-17.0e-1581.25Show/hide
Query:  NWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTEAAPRNKGAAASA
        NWSVKAIRRKTTGTGRMRY+R+VPRRFK+ FREGT+A PRNK AA+S+
Subjt:  NWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTEAAPRNKGAAASA

Q9VXX8 Probable 60S ribosomal protein L37-A7.5e-0964.44Show/hide
Query:  NWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTEAAPRNKGAA
        NWSVKA RRKTTGTGRM++++ V RRF++GFREGT+A P+   A+
Subjt:  NWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTEAAPRNKGAA

Arabidopsis top hitse value%identityAlignment
AT1G15250.1 Zinc-binding ribosomal protein family protein5.0e-1681.25Show/hide
Query:  NWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTEAAPRNKGAAASA
        NWSVKAIRRKTTGTGRMRY+R+VPRRFK+ FREGT+A PRNK AA+S+
Subjt:  NWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTEAAPRNKGAAASA

AT1G52300.1 Zinc-binding ribosomal protein family protein7.0e-1887.5Show/hide
Query:  NWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTEAAPRNKGAAASA
        NWSVKAIRRKTTGTGRMRY+R+VPRRFK+GFREGTEA PRNKG A+SA
Subjt:  NWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTEAAPRNKGAAASA

AT3G16080.1 Zinc-binding ribosomal protein family protein1.0e-1683.33Show/hide
Query:  NWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTEAAPRNKGAAASA
        NWSVKAIRRKTTGTGRMRY+R+VPRRFK+GFREGTEA PR+K +A+SA
Subjt:  NWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTEAAPRNKGAAASA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTTGCTCGATTAATCTACAGGGTAAGGGTACGGGAAGTTTTGGTAAGAGGAGGAACAAGACCCATACTCTCTGTGTGCGGTGCGGCCGCCGCAGCTTCCATCTCCAGAAG
AGTCGGTGTTCAGCATGTGCTTTCCCTGCTGCCCGCAAGCGAAAATAACTGGAGTGTGAAGGCCATTAGGAGAAAGACAACCGGAACTGGAAGGATGAGGTACATGCGCC
ATGTTCCGCGTAGATTCAAGAGCGGCTTCAGAGAGGGTACTGAAGCTGCACCCAGGAACAAGGGAGCTGCAGCATCAGCATAA
mRNA sequenceShow/hide mRNA sequence
CTTGCTCGATTAATCTACAGGGTAAGGGTACGGGAAGTTTTGGTAAGAGGAGGAACAAGACCCATACTCTCTGTGTGCGGTGCGGCCGCCGCAGCTTCCATCTCCAGAAG
AGTCGGTGTTCAGCATGTGCTTTCCCTGCTGCCCGCAAGCGAAAATAACTGGAGTGTGAAGGCCATTAGGAGAAAGACAACCGGAACTGGAAGGATGAGGTACATGCGCC
ATGTTCCGCGTAGATTCAAGAGCGGCTTCAGAGAGGGTACTGAAGCTGCACCCAGGAACAAGGGAGCTGCAGCATCAGCATAAGGTTTTGGAAGGAGTTCAACTTAATTT
CAGTTCCCAACTATAGCTTTCAGTAGGGGCTTTACTCGTCTGAGGATCATTTCATATAATTTTGTTTTCTAGTTTTGCCTTTTCATGATTTAGTTGAACGCGGTTTCTTT
AATATTTAATGTTTTGAAATTTGGACAAAGATGAATCAGATTATTCGTACTCTGGTACTTGTTTTTGTGCT
Protein sequenceShow/hide protein sequence
LARLIYRVRVREVLVRGGTRPILSVCGAAAAASISRRVGVQHVLSLLPASENNWSVKAIRRKTTGTGRMRYMRHVPRRFKSGFREGTEAAPRNKGAAASA