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Carg18817 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18817
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionthionin-like protein 2
Genome locationCarg_Chr08:3751050..3751695
RNA-Seq ExpressionCarg18817
SyntenyCarg18817
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR038975 - Thionin-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593441.1 Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]3.2e-5599.07Show/hide
Query:  MKSIVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFPASAPTDLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNS
        MKSIVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFPASAP DLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNS
Subjt:  MKSIVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFPASAPTDLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNS

Query:  CSRTCLKA
        CSRTCLKA
Subjt:  CSRTCLKA

KAG7014098.1 Thionin-like protein 2 [Cucurbita argyrosperma subsp. argyrosperma]1.3e-4377.78Show/hide
Query:  MKSIVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFPASAPTDLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNS
        MKS+V+ICFILSL+AGRSTASF KCYAKCFI CAITPG+ +GTCG  CLA CLF ASAP D NH++THYFCKLGCATS+CTKFSTK DP+EKKVE CV+S
Subjt:  MKSIVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFPASAPTDLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNS

Query:  CSRTCLKA
        C+ TC+KA
Subjt:  CSRTCLKA

KAG7025781.1 Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma]6.5e-56100Show/hide
Query:  MKSIVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFPASAPTDLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNS
        MKSIVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFPASAPTDLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNS
Subjt:  MKSIVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFPASAPTDLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNS

Query:  CSRTCLKA
        CSRTCLKA
Subjt:  CSRTCLKA

XP_023000407.1 thionin-like protein 2 [Cucurbita maxima]6.1e-5497.22Show/hide
Query:  MKSIVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFPASAPTDLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNS
        MKS+VVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLF ASAP DLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNS
Subjt:  MKSIVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFPASAPTDLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNS

Query:  CSRTCLKA
        CSRTCLKA
Subjt:  CSRTCLKA

XP_038899787.1 thionin-like protein 2 [Benincasa hispida]1.0e-4884.26Show/hide
Query:  MKSIVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFPASAPTDLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNS
        MKS+++ICFI+SLV GRSTASFGKCYAKCF+VCAITPG+PIGTCG KCL DCLF AS+P D NHLDTHYFCKLGCATSLCTKFSTK DPAEKKVESCVNS
Subjt:  MKSIVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFPASAPTDLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNS

Query:  CSRTCLKA
        C +TC+KA
Subjt:  CSRTCLKA

TrEMBL top hitse value%identityAlignment
A0A067E0U5 Uncharacterized protein1.7e-2554.29Show/hide
Query:  SIVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFPASAPTDLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNSCS
        S++++  +  L+ G+S A+F +CY  CFI+C ITPG  +G+C  KCL DC+FP    T L+  DT YFCKLGCATSLCT  S+K +PA +KVE CVNSCS
Subjt:  SIVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFPASAPTDLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNSCS

Query:  RTCLK
        ++C K
Subjt:  RTCLK

A0A0A0KC18 Uncharacterized protein7.1e-4078.43Show/hide
Query:  MKSIVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFPASAPTDLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNS
        MKS+V+ICFILSLVAGRSTASFGKCYAKCFIVCAITPG+P+GTCG KCLADCLF AS+P DLN++DTHYFCKLGCATS CTKFSTK DP +K   + V +
Subjt:  MKSIVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFPASAPTDLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNS

Query:  CS
         S
Subjt:  CS

A0A5D3BCH5 Thionin-like protein 23.4e-2658.56Show/hide
Query:  MKSIVVICFILSLVAGRST--ASFGKCYAKCFIVCAITPGVP-IGTCGGKCLADCLFPASAPTDLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESC
        M+SIV+I FILSLVAGRST      K + KC   CAI P +P +  C  KC+ADC+  AS+P DLN +DTHYFCKLGC T  CTK STK D  E KVE+C
Subjt:  MKSIVVICFILSLVAGRST--ASFGKCYAKCFIVCAITPGVP-IGTCGGKCLADCLFPASAPTDLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESC

Query:  VNSCSRTCLKA
         N+C +TC+KA
Subjt:  VNSCSRTCLKA

A0A6J1DDL8 thionin-like protein 24.3e-3771.03Show/hide
Query:  IVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFPASAPT-DLN-HLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNSC
        ++++  +LSLVAG+STASFGKCYAKCF+VCAITPG+P+GTC  KCL DCLF A++ T D N  +DT YFCKLGCATSLCTKFSTK DPAEKKV SCV+SC
Subjt:  IVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFPASAPT-DLN-HLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNSC

Query:  SRTCLKA
        S+ C+ A
Subjt:  SRTCLKA

A0A6J1KDK0 thionin-like protein 23.0e-5497.22Show/hide
Query:  MKSIVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFPASAPTDLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNS
        MKS+VVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLF ASAP DLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNS
Subjt:  MKSIVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFPASAPTDLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNS

Query:  CSRTCLKA
        CSRTCLKA
Subjt:  CSRTCLKA

SwissProt top hitse value%identityAlignment
A8MRP4 Thionin-like protein 21.1e-0833.64Show/hide
Query:  SIVVICFILSLVAGRSTAS--FGKCYAKCFIVCAITPGVP-IGTCGGKCLADCLFPASAPT-DLNHLD-THYFCKLGCATSLCTKFSTKTDPAEKKVESC
        +++++  I +L+A  +     F +CY  C + C      P    C   C  +CL   S P+   N++D + YFCKLGCAT  C   S+  +P  ++V +C
Subjt:  SIVVICFILSLVAGRSTAS--FGKCYAKCFIVCAITPGVP-IGTCGGKCLADCLFPASAPT-DLNHLD-THYFCKLGCATSLCTKFSTKTDPAEKKVESC

Query:  VNSCSRTCLK
        V+SCS  C K
Subjt:  VNSCSRTCLK

Arabidopsis top hitse value%identityAlignment
AT1G12663.1 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660.7.5e-1033.64Show/hide
Query:  SIVVICFILSLVAGRSTAS--FGKCYAKCFIVCAITPGVP-IGTCGGKCLADCLFPASAPT-DLNHLD-THYFCKLGCATSLCTKFSTKTDPAEKKVESC
        +++++  I +L+A  +     F +CY  C + C      P    C   C  +CL   S P+   N++D + YFCKLGCAT  C   S+  +P  ++V +C
Subjt:  SIVVICFILSLVAGRSTAS--FGKCYAKCFIVCAITPGVP-IGTCGGKCLADCLFPASAPT-DLNHLD-THYFCKLGCATSLCTKFSTKTDPAEKKVESC

Query:  VNSCSRTCLK
        V+SCS  C K
Subjt:  VNSCSRTCLK

AT1G12672.1 unknown protein2.5e-0546.67Show/hide
Query:  DLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNSCSRTC
        ++NH D  Y+CKLGC+T  C   S+  +P   KV  CV+SCS  C
Subjt:  DLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNSCSRTC

AT1G12672.2 unknown protein3.5e-0743.55Show/hide
Query:  CLADCLFPASAPTD----LNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNSCSRTC
        C+  CL P S+  D    +NH D  Y+CKLGC+T  C   S+  +P   KV  CV+SCS  C
Subjt:  CLADCLFPASAPTD----LNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNSCSRTC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTCCATTGTTGTAATATGCTTCATTCTGAGCTTAGTTGCAGGCAGGTCCACAGCCTCCTTTGGGAAGTGCTACGCCAAGTGCTTCATTGTGTGTGCTATCACACC
AGGCGTCCCTATTGGCACATGCGGCGGAAAGTGCTTGGCTGATTGCCTCTTCCCTGCCTCTGCCCCTACAGATCTCAACCATTTGGACACTCATTATTTCTGCAAACTTG
GCTGTGCCACTTCTCTCTGCACCAAATTTAGCACCAAGACAGACCCGGCTGAGAAGAAAGTGGAAAGTTGTGTGAACTCGTGCTCTCGAACATGTTTGAAGGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTCCATTGTTGTAATATGCTTCATTCTGAGCTTAGTTGCAGGCAGGTCCACAGCCTCCTTTGGGAAGTGCTACGCCAAGTGCTTCATTGTGTGTGCTATCACACC
AGGCGTCCCTATTGGCACATGCGGCGGAAAGTGCTTGGCTGATTGCCTCTTCCCTGCCTCTGCCCCTACAGATCTCAACCATTTGGACACTCATTATTTCTGCAAACTTG
GCTGTGCCACTTCTCTCTGCACCAAATTTAGCACCAAGACAGACCCGGCTGAGAAGAAAGTGGAAAGTTGTGTGAACTCGTGCTCTCGAACATGTTTGAAGGCTTAAAAC
TGAGAAGGAGCTGGGATTGGCTTTAAAGACAATAAGTGTCGGTGGTGAAAACCAAACACCATTGGACTCTAAGCTTGTCCCATATCTACTAAGCATGTTTTGATATATCT
ATATGCTTTCTAGTTTCTGCATGTACTCGTCCTCATCACTGTCTAATAATCAAGGTTGCTTTTCCATGCT
Protein sequenceShow/hide protein sequence
MKSIVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFPASAPTDLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNSCSRTCLKA