; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg18826 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18826
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionzinc finger CCCH domain-containing protein 39-like
Genome locationCarg_Chr08:3709707..3711762
RNA-Seq ExpressionCarg18826
SyntenyCarg18826
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000571 - Zinc finger, CCCH-type
IPR036855 - Zinc finger, CCCH-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593433.1 Zinc finger CCCH domain-containing protein 39, partial [Cucurbita argyrosperma subsp. sororia]3.2e-17799.33Show/hide
Query:  MSDPYPFHQVTPPDHEARGVWPPLRPPPLPPRYTVGRFPSFYQPTMSEIVPSRVMPSNFEIPQWNNVHIGLHDNELEWRYALASNDHTRGWLPSWRGIEF
        MSDPYPFHQVTPPDHEARGVWPPLRPPPLPPRYTVGRFPSFYQPTMSEIVPSRVMPSNFEIPQWNNVHIGLHDNELEWRYALASNDHTRGWLPSWRGIEF
Subjt:  MSDPYPFHQVTPPDHEARGVWPPLRPPPLPPRYTVGRFPSFYQPTMSEIVPSRVMPSNFEIPQWNNVHIGLHDNELEWRYALASNDHTRGWLPSWRGIEF

Query:  HENRLPACPIVNSRTGMSTEMKVCRQFQRRGKCAYGDQCRFLHKIPENTKDFGSSSQNHEVRAVASGHVMDGKSMFDQFEEVRSKVQTKIVARSEIPMPV
        HENRLP CPIVNSRTGMSTEMKVCRQFQRRGKCAYGDQCRFLHKIPENTKDFGSSSQNHE+RAVASGHVMDGKSMFDQFEEVRSKVQTKIVARSEIPMPV
Subjt:  HENRLPACPIVNSRTGMSTEMKVCRQFQRRGKCAYGDQCRFLHKIPENTKDFGSSSQNHEVRAVASGHVMDGKSMFDQFEEVRSKVQTKIVARSEIPMPV

Query:  NCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKLESCSTSERGRVGGASATTKAAAAAGLRCSRGIGTDCKNKGSSRMKQLFKSKEHKKLIGIYADWLEN
        NCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKLESCSTSERGRVGGASATTKAAAAAGLRCSRGIGTDCKNKGSSRMKQLFKSKEHKKLIGIYADWLEN
Subjt:  NCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKLESCSTSERGRVGGASATTKAAAAAGLRCSRGIGTDCKNKGSSRMKQLFKSKEHKKLIGIYADWLEN

KAG7025772.1 Zinc finger CCCH domain-containing protein 39 [Cucurbita argyrosperma subsp. argyrosperma]6.4e-178100Show/hide
Query:  MSDPYPFHQVTPPDHEARGVWPPLRPPPLPPRYTVGRFPSFYQPTMSEIVPSRVMPSNFEIPQWNNVHIGLHDNELEWRYALASNDHTRGWLPSWRGIEF
        MSDPYPFHQVTPPDHEARGVWPPLRPPPLPPRYTVGRFPSFYQPTMSEIVPSRVMPSNFEIPQWNNVHIGLHDNELEWRYALASNDHTRGWLPSWRGIEF
Subjt:  MSDPYPFHQVTPPDHEARGVWPPLRPPPLPPRYTVGRFPSFYQPTMSEIVPSRVMPSNFEIPQWNNVHIGLHDNELEWRYALASNDHTRGWLPSWRGIEF

Query:  HENRLPACPIVNSRTGMSTEMKVCRQFQRRGKCAYGDQCRFLHKIPENTKDFGSSSQNHEVRAVASGHVMDGKSMFDQFEEVRSKVQTKIVARSEIPMPV
        HENRLPACPIVNSRTGMSTEMKVCRQFQRRGKCAYGDQCRFLHKIPENTKDFGSSSQNHEVRAVASGHVMDGKSMFDQFEEVRSKVQTKIVARSEIPMPV
Subjt:  HENRLPACPIVNSRTGMSTEMKVCRQFQRRGKCAYGDQCRFLHKIPENTKDFGSSSQNHEVRAVASGHVMDGKSMFDQFEEVRSKVQTKIVARSEIPMPV

Query:  NCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKLESCSTSERGRVGGASATTKAAAAAGLRCSRGIGTDCKNKGSSRMKQLFKSKEHKKLIGIYADWLEN
        NCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKLESCSTSERGRVGGASATTKAAAAAGLRCSRGIGTDCKNKGSSRMKQLFKSKEHKKLIGIYADWLEN
Subjt:  NCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKLESCSTSERGRVGGASATTKAAAAAGLRCSRGIGTDCKNKGSSRMKQLFKSKEHKKLIGIYADWLEN

XP_022964047.1 zinc finger CCCH domain-containing protein 39-like [Cucurbita moschata]2.4e-17799.67Show/hide
Query:  MSDPYPFHQVTPPDHEARGVWPPLRPPPLPPRYTVGRFPSFYQPTMSEIVPSRVMPSNFEIPQWNNVHIGLHDNELEWRYALASNDHTRGWLPSWRGIEF
        MSDPYPFHQVTPPDHEARGVWPPLRPPPLPPRYTVGRFPSFYQPTMSEIVPSRVMPSNFEIPQWNNVHIGLHDNELEWRYALASNDHTRGWLPSWRGIEF
Subjt:  MSDPYPFHQVTPPDHEARGVWPPLRPPPLPPRYTVGRFPSFYQPTMSEIVPSRVMPSNFEIPQWNNVHIGLHDNELEWRYALASNDHTRGWLPSWRGIEF

Query:  HENRLPACPIVNSRTGMSTEMKVCRQFQRRGKCAYGDQCRFLHKIPENTKDFGSSSQNHEVRAVASGHVMDGKSMFDQFEEVRSKVQTKIVARSEIPMPV
        HENRLP CPIVNSRTGMSTEMKVCRQFQRRGKCAYGDQCRFLHKIPENTKDFGSSSQNHEVRAVASGHVMDGKSMFDQFEEVRSKVQTKIVARSEIPMPV
Subjt:  HENRLPACPIVNSRTGMSTEMKVCRQFQRRGKCAYGDQCRFLHKIPENTKDFGSSSQNHEVRAVASGHVMDGKSMFDQFEEVRSKVQTKIVARSEIPMPV

Query:  NCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKLESCSTSERGRVGGASATTKAAAAAGLRCSRGIGTDCKNKGSSRMKQLFKSKEHKKLIGIYADWLEN
        NCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKLESCSTSERGRVGGASATTKAAAAAGLRCSRGIGTDCKNKGSSRMKQLFKSKEHKKLIGIYADWLEN
Subjt:  NCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKLESCSTSERGRVGGASATTKAAAAAGLRCSRGIGTDCKNKGSSRMKQLFKSKEHKKLIGIYADWLEN

XP_023000378.1 zinc finger CCCH domain-containing protein 39-like [Cucurbita maxima]1.0e-16795.02Show/hide
Query:  MSDPYPFHQVTPPDHEARGVWPPLRPPPLPPRYTVGRFPSFYQPTMSEIVPSRVMPSNFEIPQWNNVHIGLHDNELEWRYALASNDHTRGWLPSWRGIEF
        MSDPYPFHQVTP DHEARGVWPPLRPPP PPRY++GRFPSFYQPTMSE+VPSRVMPSNFEIPQWNNV+IGLHDNELEWRYALASNDHTRGWLPSWRGIEF
Subjt:  MSDPYPFHQVTPPDHEARGVWPPLRPPPLPPRYTVGRFPSFYQPTMSEIVPSRVMPSNFEIPQWNNVHIGLHDNELEWRYALASNDHTRGWLPSWRGIEF

Query:  HENRLPACPIVNSRTGMSTEMKVCRQFQRRGKCAYGDQCRFLHKIPENTKDFGSSSQNHEVRAVASGHVMDGKSMFDQFEEVRSKVQTKIVARSEIPMPV
        HENRLP CPIVNSRTGM+TEMKVCRQFQRRGKCAYGDQCRFLHKIPENTKDFG SSQNHEVRAVASGHVMD KSMFDQFEEVRSKVQTKIVARSEIP+PV
Subjt:  HENRLPACPIVNSRTGMSTEMKVCRQFQRRGKCAYGDQCRFLHKIPENTKDFGSSSQNHEVRAVASGHVMDGKSMFDQFEEVRSKVQTKIVARSEIPMPV

Query:  NCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKLESCSTSERGRVGGASATTKAAAAAGLRCSRGIGTDCKNKGSSRMKQLFKSKEH-KKLIGIYADWLE
        +CKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKLESCS SERGRVGGASATTKAAAAAGLRCSRGIGTD KNKGSSRMKQLFKSKEH KKLIGIYADWLE
Subjt:  NCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKLESCSTSERGRVGGASATTKAAAAAGLRCSRGIGTDCKNKGSSRMKQLFKSKEH-KKLIGIYADWLE

Query:  N
        N
Subjt:  N

XP_023513806.1 zinc finger CCCH domain-containing protein 39-like [Cucurbita pepo subsp. pepo]2.1e-16895Show/hide
Query:  MSDPYPFHQVTPPDHEARGVWPPLRPPPLPPRYTVGRFPSFYQPTMSEIVPSRVMPSNFEIPQWNNVHIGLHDNELEWRYALASNDHTRGWLPSWRGIEF
        MSDPYPFHQVTPPDHEARGVW     PPLPPRYTVGRFPSFY+PTMSE+VPSRVMPSNFEIPQWNNV+IGLHDNELEWRYALASNDHTRGWLPSWRGI+F
Subjt:  MSDPYPFHQVTPPDHEARGVWPPLRPPPLPPRYTVGRFPSFYQPTMSEIVPSRVMPSNFEIPQWNNVHIGLHDNELEWRYALASNDHTRGWLPSWRGIEF

Query:  HENRLPACPIVNSRTGMSTEMKVCRQFQRRGKCAYGDQCRFLHKIPENTKDFGSSSQNHEVRAVASGHVMDGKSMFDQFEEVRSKVQTKIVARSEIPMPV
        HENRLP CPI+N+RTGMSTEMKVCRQFQRRGKCAYGDQCRFLHKIPENTKDFG S+QNHEVRAVASGHVMDGKSMFDQFEEVRSKVQTKIVARSEIPMPV
Subjt:  HENRLPACPIVNSRTGMSTEMKVCRQFQRRGKCAYGDQCRFLHKIPENTKDFGSSSQNHEVRAVASGHVMDGKSMFDQFEEVRSKVQTKIVARSEIPMPV

Query:  NCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKLESCSTSERGRVGGASATTKAAAAAGLRCSRGIGTDCKNKGSSRMKQLFKSKEHKKLIGIYADWLEN
        NCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKLESCS SERGRVGGASATTKAAAAAGLRCSRGIGTDCKNKGSSRMKQLFKSKEHKKLIGIYADWLEN
Subjt:  NCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKLESCSTSERGRVGGASATTKAAAAAGLRCSRGIGTDCKNKGSSRMKQLFKSKEHKKLIGIYADWLEN

TrEMBL top hitse value%identityAlignment
A0A0A0KBW4 Uncharacterized protein4.0e-8563.76Show/hide
Query:  EARGVWPPLRPPPLPPRYTVGRFPSFYQPTMSEIVPSRVMPSNFEIPQWNNVHIGLHDNELEWRYALASNDHTRGWLPSWRGIEFHENRLPACPIVNSRT
        EARG W PL PPP P      R  SFY+PTMS +V S  MPSNF IP WNN +IG +++E    Y    ND TR  LPS  GIEF E +L     V++  
Subjt:  EARGVWPPLRPPPLPPRYTVGRFPSFYQPTMSEIVPSRVMPSNFEIPQWNNVHIGLHDNELEWRYALASNDHTRGWLPSWRGIEFHENRLPACPIVNSRT

Query:  GMSTEMKVCRQFQRRGKCAYGDQCRFLHKIPENTKDFGSSSQNHEVRAVASGHVMDGKSMFDQFEEVRSKVQTKIVARSEIPMPVNCKTRLCYLWQTTGH
          S EMKVCR FQRR KCAYGDQCRFLH+IP+ T+D GSSSQN+EV  VA GHVMD  S FDQ EEVRSKVQTK+V R EIP P+  K+R CY WQTTG 
Subjt:  GMSTEMKVCRQFQRRGKCAYGDQCRFLHKIPENTKDFGSSSQNHEVRAVASGHVMDGKSMFDQFEEVRSKVQTKIVARSEIPMPVNCKTRLCYLWQTTGH

Query:  CSYGEVCRFAHGEAELQKLESCSTSERGRVGGAS--ATTKAAAAAGLRCSRGIGTDCKNKGSSRMKQLFKSKEHKKLIGIYADWLEN
        C YG  CRFAHGEAELQKLE C+ S+RG VGG S  ATT AA  AGLR SR IGTDCKNKG  R+ Q F+SKE KKLIGIYADWLE+
Subjt:  CSYGEVCRFAHGEAELQKLESCSTSERGRVGGAS--ATTKAAAAAGLRCSRGIGTDCKNKGSSRMKQLFKSKEHKKLIGIYADWLEN

A0A1S4E329 zinc finger CCCH domain-containing protein 39-like2.1e-7861.67Show/hide
Query:  EARGVWPPLRPPPLPPRYTVGRFPSFYQPTMSEIVPSRVMPSNFEIPQWNNVHIGLHDNELEWRYALASNDHTRGWLPSWRGIEFHENRLPACPIVNSRT
        EARG W PL PPP P      R  SFY+ TMS  V S  MPSNF IP WNN +IG +++EL   Y    ND T   LPS  GIEFHE +L     V+   
Subjt:  EARGVWPPLRPPPLPPRYTVGRFPSFYQPTMSEIVPSRVMPSNFEIPQWNNVHIGLHDNELEWRYALASNDHTRGWLPSWRGIEFHENRLPACPIVNSRT

Query:  GMSTEMKVCRQFQRRGKCAYGDQCRFLHKIPENTKDFGSSSQNHEVRAVASGHVMDGKSMFDQFEEVRSKVQTKIVARSEIPMPVNCKTRLCYLWQTTGH
          S EMKVCR FQRR KCAYGDQCRFLH+IPE T+D GSSSQN+EVR          +S FDQ EEVRSKVQTK+V R EIP P+  K R CY WQTTG 
Subjt:  GMSTEMKVCRQFQRRGKCAYGDQCRFLHKIPENTKDFGSSSQNHEVRAVASGHVMDGKSMFDQFEEVRSKVQTKIVARSEIPMPVNCKTRLCYLWQTTGH

Query:  CSYGEVCRFAHGEAELQKLESCSTSERGRVGG--ASATTKAAAAAGLRCSRGIGTDCKNKGSSRMKQLFKSKEHKKLIGIYADWLEN
        C YG  CRFAHGEAELQKLE CS S+RG VGG  A+ATT A   AGLR S+ IGTDCKNKG  R+ Q F+SKE KKLIGIYADWLE+
Subjt:  CSYGEVCRFAHGEAELQKLESCSTSERGRVGG--ASATTKAAAAAGLRCSRGIGTDCKNKGSSRMKQLFKSKEHKKLIGIYADWLEN

A0A5A7UUP3 Zinc finger CCCH domain-containing protein 39-like2.1e-7861.67Show/hide
Query:  EARGVWPPLRPPPLPPRYTVGRFPSFYQPTMSEIVPSRVMPSNFEIPQWNNVHIGLHDNELEWRYALASNDHTRGWLPSWRGIEFHENRLPACPIVNSRT
        EARG W PL PPP P      R  SFY+ TMS  V S  MPSNF IP WNN +IG +++EL   Y    ND T   LPS  GIEFHE +L     V+   
Subjt:  EARGVWPPLRPPPLPPRYTVGRFPSFYQPTMSEIVPSRVMPSNFEIPQWNNVHIGLHDNELEWRYALASNDHTRGWLPSWRGIEFHENRLPACPIVNSRT

Query:  GMSTEMKVCRQFQRRGKCAYGDQCRFLHKIPENTKDFGSSSQNHEVRAVASGHVMDGKSMFDQFEEVRSKVQTKIVARSEIPMPVNCKTRLCYLWQTTGH
          S EMKVCR FQRR KCAYGDQCRFLH+IPE T+D GSSSQN+EVR          +S FDQ EEVRSKVQTK+V R EIP P+  K R CY WQTTG 
Subjt:  GMSTEMKVCRQFQRRGKCAYGDQCRFLHKIPENTKDFGSSSQNHEVRAVASGHVMDGKSMFDQFEEVRSKVQTKIVARSEIPMPVNCKTRLCYLWQTTGH

Query:  CSYGEVCRFAHGEAELQKLESCSTSERGRVGG--ASATTKAAAAAGLRCSRGIGTDCKNKGSSRMKQLFKSKEHKKLIGIYADWLEN
        C YG  CRFAHGEAELQKLE CS S+RG VGG  A+ATT A   AGLR S+ IGTDCKNKG  R+ Q F+SKE KKLIGIYADWLE+
Subjt:  CSYGEVCRFAHGEAELQKLESCSTSERGRVGG--ASATTKAAAAAGLRCSRGIGTDCKNKGSSRMKQLFKSKEHKKLIGIYADWLEN

A0A6J1HGS0 zinc finger CCCH domain-containing protein 39-like1.2e-17799.67Show/hide
Query:  MSDPYPFHQVTPPDHEARGVWPPLRPPPLPPRYTVGRFPSFYQPTMSEIVPSRVMPSNFEIPQWNNVHIGLHDNELEWRYALASNDHTRGWLPSWRGIEF
        MSDPYPFHQVTPPDHEARGVWPPLRPPPLPPRYTVGRFPSFYQPTMSEIVPSRVMPSNFEIPQWNNVHIGLHDNELEWRYALASNDHTRGWLPSWRGIEF
Subjt:  MSDPYPFHQVTPPDHEARGVWPPLRPPPLPPRYTVGRFPSFYQPTMSEIVPSRVMPSNFEIPQWNNVHIGLHDNELEWRYALASNDHTRGWLPSWRGIEF

Query:  HENRLPACPIVNSRTGMSTEMKVCRQFQRRGKCAYGDQCRFLHKIPENTKDFGSSSQNHEVRAVASGHVMDGKSMFDQFEEVRSKVQTKIVARSEIPMPV
        HENRLP CPIVNSRTGMSTEMKVCRQFQRRGKCAYGDQCRFLHKIPENTKDFGSSSQNHEVRAVASGHVMDGKSMFDQFEEVRSKVQTKIVARSEIPMPV
Subjt:  HENRLPACPIVNSRTGMSTEMKVCRQFQRRGKCAYGDQCRFLHKIPENTKDFGSSSQNHEVRAVASGHVMDGKSMFDQFEEVRSKVQTKIVARSEIPMPV

Query:  NCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKLESCSTSERGRVGGASATTKAAAAAGLRCSRGIGTDCKNKGSSRMKQLFKSKEHKKLIGIYADWLEN
        NCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKLESCSTSERGRVGGASATTKAAAAAGLRCSRGIGTDCKNKGSSRMKQLFKSKEHKKLIGIYADWLEN
Subjt:  NCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKLESCSTSERGRVGGASATTKAAAAAGLRCSRGIGTDCKNKGSSRMKQLFKSKEHKKLIGIYADWLEN

A0A6J1KMG0 zinc finger CCCH domain-containing protein 39-like5.0e-16895.02Show/hide
Query:  MSDPYPFHQVTPPDHEARGVWPPLRPPPLPPRYTVGRFPSFYQPTMSEIVPSRVMPSNFEIPQWNNVHIGLHDNELEWRYALASNDHTRGWLPSWRGIEF
        MSDPYPFHQVTP DHEARGVWPPLRPPP PPRY++GRFPSFYQPTMSE+VPSRVMPSNFEIPQWNNV+IGLHDNELEWRYALASNDHTRGWLPSWRGIEF
Subjt:  MSDPYPFHQVTPPDHEARGVWPPLRPPPLPPRYTVGRFPSFYQPTMSEIVPSRVMPSNFEIPQWNNVHIGLHDNELEWRYALASNDHTRGWLPSWRGIEF

Query:  HENRLPACPIVNSRTGMSTEMKVCRQFQRRGKCAYGDQCRFLHKIPENTKDFGSSSQNHEVRAVASGHVMDGKSMFDQFEEVRSKVQTKIVARSEIPMPV
        HENRLP CPIVNSRTGM+TEMKVCRQFQRRGKCAYGDQCRFLHKIPENTKDFG SSQNHEVRAVASGHVMD KSMFDQFEEVRSKVQTKIVARSEIP+PV
Subjt:  HENRLPACPIVNSRTGMSTEMKVCRQFQRRGKCAYGDQCRFLHKIPENTKDFGSSSQNHEVRAVASGHVMDGKSMFDQFEEVRSKVQTKIVARSEIPMPV

Query:  NCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKLESCSTSERGRVGGASATTKAAAAAGLRCSRGIGTDCKNKGSSRMKQLFKSKEH-KKLIGIYADWLE
        +CKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKLESCS SERGRVGGASATTKAAAAAGLRCSRGIGTD KNKGSSRMKQLFKSKEH KKLIGIYADWLE
Subjt:  NCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKLESCSTSERGRVGGASATTKAAAAAGLRCSRGIGTDCKNKGSSRMKQLFKSKEH-KKLIGIYADWLE

Query:  N
        N
Subjt:  N

SwissProt top hitse value%identityAlignment
Q5PP65 Zinc finger CCCH domain-containing protein 284.3e-0724.19Show/hide
Query:  NDHTRGWLPSWRGIEFHENRLPACPIVNSRTGMSTEM-------KVCRQFQRRGKCAY-GDQCRFLHKI----------PENTKDFGSSSQNHEVRAVAS
        +D++R W  +  G E         P   +R+  S+E+       K+C +F R G C Y    C F H            P   +    +S+N E  AV+ 
Subjt:  NDHTRGWLPSWRGIEFHENRLPACPIVNSRTGMSTEM-------KVCRQFQRRGKCAY-GDQCRFLHKI----------PENTKDFGSSSQNHEVRAVAS

Query:  GHVMDGKSMFDQFEEVRSKVQTKIVARSEIPMPVNCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKL--------------ESCSTSERGRVGGASATT
        G               R  V   + +        N KTR+C  WQTTG+C +G  C FAHG +EL                  +  T +RG+V     T 
Subjt:  GHVMDGKSMFDQFEEVRSKVQTKIVARSEIPMPVNCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKL--------------ESCSTSERGRVGGASATT

Query:  KAAAAAGLRCSRGIGTDCKNKGSSRMKQLFKSKEHKKLIGIYADWLEN
         +  + G+   R      +     R ++ +K  +  K+  +Y DW+++
Subjt:  KAAAAAGLRCSRGIGTDCKNKGSSRMKQLFKSKEHKKLIGIYADWLEN

Q69XQ3 Zinc finger CCCH domain-containing protein 443.6e-0628.23Show/hide
Query:  NSRTGMSTEMKVCRQFQRRGKCAYGDQCRFLHKIPENTKDFGSSSQNHEVRAVAS--GHVMDGKSMFDQFEEVRSKVQTKIVARSEIPMPVNCKTRLCYL
        +S+ G+ +++K C +F     C +G  C FLH  P   +   +   +H   AVA+  G +  G                        P   + KTR+C  
Subjt:  NSRTGMSTEMKVCRQFQRRGKCAYGDQCRFLHKIPENTKDFGSSSQNHEVRAVAS--GHVMDGKSMFDQFEEVRSKVQTKIVARSEIPMPVNCKTRLCYL

Query:  WQTTGHCSYGEVCRFAHGEAELQK
        + T   C +G  C FAHGE EL K
Subjt:  WQTTGHCSYGEVCRFAHGEAELQK

Q84UQ3 Zinc finger CCCH domain-containing protein 567.0e-1025.71Show/hide
Query:  TGMSTEMKVCRQFQRRGKCAYGDQCRFLHKIPENTKDFGSSSQNHEVRAVASGHVMDGKSMFDQFEEVRSKVQTKIVARSEIPM--PVNCKTRLCYLWQT
        +G + + + C++F     C YGD C FLH            S+  E  A++    + G      +    +   +   A    PM  P N KTR+C  W+ 
Subjt:  TGMSTEMKVCRQFQRRGKCAYGDQCRFLHKIPENTKDFGSSSQNHEVRAVASGHVMDGKSMFDQFEEVRSKVQTKIVARSEIPM--PVNCKTRLCYLWQT

Query:  TGHCSYGEVCRFAHGEAELQKL-----------ESCSTSERGRVGGASATTKAAAAA------------GLRCSRGIGTDCKNKGSSRMKQLFKSKEHKK
        TG+C +G  C FAHG AEL K             + +   +  V  A A  + AAA+            G++  R   T    +     + + K K   K
Subjt:  TGHCSYGEVCRFAHGEAELQKL-----------ESCSTSERGRVGGASATTKAAAAA------------GLRCSRGIGTDCKNKGSSRMKQLFKSKEHKK

Query:  LIGIYADWLE
        +  IY DW++
Subjt:  LIGIYADWLE

Q9LQM3 Zinc finger CCCH domain-containing protein 122.4e-1024.58Show/hide
Query:  WRYALASNDHTRG---WLPSWRGIEF--HENRLPACPIVNSRTGMSTEMKVCRQFQRRGKCAYGDQCRFLHKIPENTKD-----FGSSSQNHEVRAVASG
        W+  +A+++  R      P+   +E    E ++P+     + +G S + + C++F     C YG+ C FLH      ++      G           + G
Subjt:  WRYALASNDHTRG---WLPSWRGIEF--HENRLPACPIVNSRTGMSTEMKVCRQFQRRGKCAYGDQCRFLHKIPENTKD-----FGSSSQNHEVRAVASG

Query:  HVMDGKSMFDQFEEVRSKVQTKIVARSEIPMPVNCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKLESCSTSERGRVG
          + G         +     +   +  +I  P N KTR+C  W+ TG+C +G  C FAHG AEL +       E G+ G
Subjt:  HVMDGKSMFDQFEEVRSKVQTKIVARSEIPMPVNCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKLESCSTSERGRVG

Q9LT81 Zinc finger CCCH domain-containing protein 393.4e-1228.82Show/hide
Query:  EFHENRLPACPIVNSR----TGMSTEMKVCRQFQRRGKCAYGDQCRFLHKIPENTKDFGSSSQNHEVRAVASGHVMDGKSMFDQFEEVRSKVQTKIVARS
        E    R    P+VN+       +   MK+CR+F    +C YGD+C F+H   E+   F   S      +V S     G +  DQ  +  S +  ++  + 
Subjt:  EFHENRLPACPIVNSR----TGMSTEMKVCRQFQRRGKCAYGDQCRFLHKIPENTKDFGSSSQNHEVRAVASGHVMDGKSMFDQFEEVRSKVQTKIVARS

Query:  EIPMP-----------VNCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKLESCSTSERGRVGGAS----------ATTKAAAAAGLRCSRGIGTDCK--
         IP+P           V  KTRLC  +  TG C +G+ C FAHG+AEL        +  GRV G +          A   A  A  ++    +  D    
Subjt:  EIPMP-----------VNCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKLESCSTSERGRVGGAS----------ATTKAAAAAGLRCSRGIGTDCK--

Query:  NKGSSRMKQLFKSKEHKKLIGIYADWLEN
        N+   R K L K  + KK+  IY DW+++
Subjt:  NKGSSRMKQLFKSKEHKKLIGIYADWLEN

Arabidopsis top hitse value%identityAlignment
AT1G32360.1 Zinc finger (CCCH-type) family protein1.7e-1124.58Show/hide
Query:  WRYALASNDHTRG---WLPSWRGIEF--HENRLPACPIVNSRTGMSTEMKVCRQFQRRGKCAYGDQCRFLHKIPENTKD-----FGSSSQNHEVRAVASG
        W+  +A+++  R      P+   +E    E ++P+     + +G S + + C++F     C YG+ C FLH      ++      G           + G
Subjt:  WRYALASNDHTRG---WLPSWRGIEF--HENRLPACPIVNSRTGMSTEMKVCRQFQRRGKCAYGDQCRFLHKIPENTKD-----FGSSSQNHEVRAVASG

Query:  HVMDGKSMFDQFEEVRSKVQTKIVARSEIPMPVNCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKLESCSTSERGRVG
          + G         +     +   +  +I  P N KTR+C  W+ TG+C +G  C FAHG AEL +       E G+ G
Subjt:  HVMDGKSMFDQFEEVRSKVQTKIVARSEIPMPVNCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKLESCSTSERGRVG

AT1G68200.1 Zinc finger C-x8-C-x5-C-x3-H type family protein5.3e-0535.62Show/hide
Query:  EVRAVASGHVMDGKSMFDQFEEVRSKVQTKIVARSEIPMPVNCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQ
        +V      +V  G    DQ EE+  +V  + +           KT LC  WQ TG C YG+ C+FAHG  EL+
Subjt:  EVRAVASGHVMDGKSMFDQFEEVRSKVQTKIVARSEIPMPVNCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQ

AT1G68200.2 Zinc finger C-x8-C-x5-C-x3-H type family protein7.0e-0538.46Show/hide
Query:  HVMDGKSMFDQFEEVRSKVQTKIVARSEIPMPVNCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQ
        +V  G    DQ EE+  +V  + +           KT LC  WQ TG C YG+ C+FAHG  EL+
Subjt:  HVMDGKSMFDQFEEVRSKVQTKIVARSEIPMPVNCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQ

AT2G35430.1 Zinc finger C-x8-C-x5-C-x3-H type family protein3.0e-0824.19Show/hide
Query:  NDHTRGWLPSWRGIEFHENRLPACPIVNSRTGMSTEM-------KVCRQFQRRGKCAY-GDQCRFLHKI----------PENTKDFGSSSQNHEVRAVAS
        +D++R W  +  G E         P   +R+  S+E+       K+C +F R G C Y    C F H            P   +    +S+N E  AV+ 
Subjt:  NDHTRGWLPSWRGIEFHENRLPACPIVNSRTGMSTEM-------KVCRQFQRRGKCAY-GDQCRFLHKI----------PENTKDFGSSSQNHEVRAVAS

Query:  GHVMDGKSMFDQFEEVRSKVQTKIVARSEIPMPVNCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKL--------------ESCSTSERGRVGGASATT
        G               R  V   + +        N KTR+C  WQTTG+C +G  C FAHG +EL                  +  T +RG+V     T 
Subjt:  GHVMDGKSMFDQFEEVRSKVQTKIVARSEIPMPVNCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKL--------------ESCSTSERGRVGGASATT

Query:  KAAAAAGLRCSRGIGTDCKNKGSSRMKQLFKSKEHKKLIGIYADWLEN
         +  + G+   R      +     R ++ +K  +  K+  +Y DW+++
Subjt:  KAAAAAGLRCSRGIGTDCKNKGSSRMKQLFKSKEHKKLIGIYADWLEN

AT3G19360.1 Zinc finger (CCCH-type) family protein2.4e-1328.82Show/hide
Query:  EFHENRLPACPIVNSR----TGMSTEMKVCRQFQRRGKCAYGDQCRFLHKIPENTKDFGSSSQNHEVRAVASGHVMDGKSMFDQFEEVRSKVQTKIVARS
        E    R    P+VN+       +   MK+CR+F    +C YGD+C F+H   E+   F   S      +V S     G +  DQ  +  S +  ++  + 
Subjt:  EFHENRLPACPIVNSR----TGMSTEMKVCRQFQRRGKCAYGDQCRFLHKIPENTKDFGSSSQNHEVRAVASGHVMDGKSMFDQFEEVRSKVQTKIVARS

Query:  EIPMP-----------VNCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKLESCSTSERGRVGGAS----------ATTKAAAAAGLRCSRGIGTDCK--
         IP+P           V  KTRLC  +  TG C +G+ C FAHG+AEL        +  GRV G +          A   A  A  ++    +  D    
Subjt:  EIPMP-----------VNCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKLESCSTSERGRVGGAS----------ATTKAAAAAGLRCSRGIGTDCK--

Query:  NKGSSRMKQLFKSKEHKKLIGIYADWLEN
        N+   R K L K  + KK+  IY DW+++
Subjt:  NKGSSRMKQLFKSKEHKKLIGIYADWLEN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGATCCTTATCCTTTTCACCAAGTTACTCCTCCAGACCATGAGGCTCGTGGCGTTTGGCCGCCATTGCGTCCTCCGCCATTGCCTCCTCGATATACTGTTGGTCG
ATTCCCATCATTTTATCAGCCTACGATGTCGGAAATTGTACCGAGTAGGGTAATGCCTTCAAATTTTGAGATTCCACAATGGAACAATGTGCACATTGGATTACATGACA
ATGAGTTGGAGTGGAGATATGCACTTGCTTCTAATGATCATACTCGTGGATGGTTACCTTCTTGGCGAGGAATTGAATTCCATGAAAATCGATTACCAGCGTGTCCGATT
GTTAACAGTCGGACTGGAATGTCGACTGAAATGAAAGTTTGCAGACAATTCCAACGTAGGGGGAAATGTGCATATGGTGATCAGTGTCGTTTCCTTCATAAAATTCCTGA
GAACACTAAGGATTTTGGCTCCTCCAGCCAGAACCATGAGGTTAGAGCAGTAGCTTCTGGTCATGTTATGGATGGAAAAAGTATGTTTGATCAATTTGAAGAAGTCAGAT
CAAAAGTACAAACGAAAATTGTTGCCCGCAGTGAGATTCCAATGCCTGTAAATTGCAAAACAAGGCTCTGTTACCTCTGGCAGACAACTGGTCACTGCTCATATGGGGAG
GTTTGTCGCTTCGCTCATGGAGAAGCAGAATTACAGAAGCTCGAGTCGTGCAGTACATCAGAACGTGGCAGAGTAGGTGGAGCCTCTGCAACAACGAAAGCTGCTGCCGC
GGCTGGATTAAGGTGCAGCAGAGGAATTGGAACCGACTGTAAGAATAAAGGATCATCAAGAATGAAGCAACTCTTTAAATCAAAGGAGCATAAGAAGTTGATTGGCATTT
ACGCTGACTGGCTTGAGAATTGA
mRNA sequenceShow/hide mRNA sequence
ATCTTCTCCGCTGTGGTTTCCGATCAACGCCTAGGGTTTAACTCTGTAAATATTGTACAAATGTCTCTTATACCTGTCAATTAATTGGATGTATCATTTGCCATTTCAAA
TTTCATCGATTTCTTCAAAACTTGTGGACTTGGGGCTTGGTGTCTCTTCTGGAAGTTTTGGACAGTTCTTCATCAGGTATCTCTCTGAGTTTTCCATTCTTTTGCGCCAA
ATTTGGACTCCTCAACTTTAGCTGCATGTGTCAATTTTTTATTCGCTTCCGATTTGAAGATATTGACAATGTACAGAGATTTAAGCGATTTGTCTATTGTTACTTTTGGA
AAAGAAATGTTGCTTAGAACCTACTGTTTTTATCAGTTCAAAGAATTTGAAACTTGAAATTGGATGGTTTGGCCCTTGAAATGAGTGATCCTTATCCTTTTCACCAAGTT
ACTCCTCCAGACCATGAGGCTCGTGGCGTTTGGCCGCCATTGCGTCCTCCGCCATTGCCTCCTCGATATACTGTTGGTCGATTCCCATCATTTTATCAGCCTACGATGTC
GGAAATTGTACCGAGTAGGGTAATGCCTTCAAATTTTGAGATTCCACAATGGAACAATGTGCACATTGGATTACATGACAATGAGTTGGAGTGGAGATATGCACTTGCTT
CTAATGATCATACTCGTGGATGGTTACCTTCTTGGCGAGGAATTGAATTCCATGAAAATCGATTACCAGCGTGTCCGATTGTTAACAGTCGGACTGGAATGTCGACTGAA
ATGAAAGTTTGCAGACAATTCCAACGTAGGGGGAAATGTGCATATGGTGATCAGTGTCGTTTCCTTCATAAAATTCCTGAGAACACTAAGGATTTTGGCTCCTCCAGCCA
GAACCATGAGGTTAGAGCAGTAGCTTCTGGTCATGTTATGGATGGAAAAAGTATGTTTGATCAATTTGAAGAAGTCAGATCAAAAGTACAAACGAAAATTGTTGCCCGCA
GTGAGATTCCAATGCCTGTAAATTGCAAAACAAGGCTCTGTTACCTCTGGCAGACAACTGGTCACTGCTCATATGGGGAGGTTTGTCGCTTCGCTCATGGAGAAGCAGAA
TTACAGAAGCTCGAGTCGTGCAGTACATCAGAACGTGGCAGAGTAGGTGGAGCCTCTGCAACAACGAAAGCTGCTGCCGCGGCTGGATTAAGGTGCAGCAGAGGAATTGG
AACCGACTGTAAGAATAAAGGATCATCAAGAATGAAGCAACTCTTTAAATCAAAGGAGCATAAGAAGTTGATTGGCATTTACGCTGACTGGCTTGAGAATTGAGTATTCT
GCATGACTTGCAGTACAAAGATTTGACCAAATACTACTGGGGCGTGTTCCAATTCTCACAAGTGGCTGAGAACATTAAGGTTCTTCTAGAACCCCCCAAGTGCATTTTGA
CATTTAAATGAATATAGGAAAATAGATATTGTTCTTAACAAGAATATGATTTTTTTTTTTTTT
Protein sequenceShow/hide protein sequence
MSDPYPFHQVTPPDHEARGVWPPLRPPPLPPRYTVGRFPSFYQPTMSEIVPSRVMPSNFEIPQWNNVHIGLHDNELEWRYALASNDHTRGWLPSWRGIEFHENRLPACPI
VNSRTGMSTEMKVCRQFQRRGKCAYGDQCRFLHKIPENTKDFGSSSQNHEVRAVASGHVMDGKSMFDQFEEVRSKVQTKIVARSEIPMPVNCKTRLCYLWQTTGHCSYGE
VCRFAHGEAELQKLESCSTSERGRVGGASATTKAAAAAGLRCSRGIGTDCKNKGSSRMKQLFKSKEHKKLIGIYADWLEN