CuGenDBv2

Gene ID	Carg18828
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	late embryogenesis abundant protein 1
Genome location	Carg_Chr08:3704568..3705068
RNA-Seq Expression	Carg18828
Synteny	Carg18828
Gene Ontology terms	NA
InterPro domains	IPR039624 - Stress-induced protein KIN1/KIN2

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6593431.1 hypothetical protein SDJN03_12907, partial [Cucurbita argyrosperma subsp. sororia]

4.1e-19

62.16

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Query:  MASQQDISHSVGEAVGQAQVKKDE------------------------------------------TGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANT
        MASQQDISHSVGEAVGQAQVKKDE                                          TGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANT
Subjt:  MASQQDISHSVGEAVGQAQVKKDE------------------------------------------TGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANT

Query:  NNPTNTPSPTI
        NNPTNTPSPTI
Subjt:  NNPTNTPSPTI

KAG7025770.1 hypothetical protein SDJN02_12268, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.9e-25

100

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Query:  MASQQDISHSVGEAVGQAQVKKDETGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANTNNPTNTPSPTI
        MASQQDISHSVGEAVGQAQVKKDETGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANTNNPTNTPSPTI
Subjt:  MASQQDISHSVGEAVGQAQVKKDETGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANTNNPTNTPSPTI

XP_022964497.1 late embryogenesis abundant protein 1 [Cucurbita moschata]

4.1e-19

62.16

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Query:  MASQQDISHSVGEAVGQAQVKKDE------------------------------------------TGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANT
        MASQQDISHSVGEAVGQAQVKKDE                                          TGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANT
Subjt:  MASQQDISHSVGEAVGQAQVKKDE------------------------------------------TGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANT

Query:  NNPTNTPSPTI
        NNPTNTPSPTI
Subjt:  NNPTNTPSPTI

XP_023000409.1 late embryogenesis abundant protein 1 [Cucurbita maxima]

1.2e-18

61.26

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Query:  MASQQDISHSVGEAVGQAQVKKDE------------------------------------------TGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANT
        MASQQDISHSVGE VGQAQVKKDE                                          TGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANT
Subjt:  MASQQDISHSVGEAVGQAQVKKDE------------------------------------------TGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANT

Query:  NNPTNTPSPTI
        NNPTNTPSPTI
Subjt:  NNPTNTPSPTI

XP_023515217.1 late embryogenesis abundant protein 1-like [Cucurbita pepo subsp. pepo]

2.6e-18

60.36

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Query:  MASQQDISHSVGEAVGQAQVKKDE------------------------------------------TGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANT
        MASQQDISH+VGE VGQAQVKKDE                                          TGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANT
Subjt:  MASQQDISHSVGEAVGQAQVKKDE------------------------------------------TGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANT

Query:  NNPTNTPSPTI
        NNPTNTPSPTI
Subjt:  NNPTNTPSPTI

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CF46 late embryogenesis abundant protein 1

1.3e-10

55.21

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Query:  MASQQD-ISHSVGEAVGQAQVKKDE-----------------------------TGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANTNNPTNTPS
        MAS QD +SH  GE VGQAQVKKDE                             TGEQVKNMAQGAAEAVKNTLGMNTD++SN   N+NNPTN P+
Subjt:  MASQQD-ISHSVGEAVGQAQVKKDE-----------------------------TGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANTNNPTNTPS

A0A5D3CF20 Late embryogenesis abundant protein 1

1.3e-10

55.21

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Query:  MASQQD-ISHSVGEAVGQAQVKKDE-----------------------------TGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANTNNPTNTPS
        MAS QD +SH  GE VGQAQVKKDE                             TGEQVKNMAQGAAEAVKNTLGMNTD++SN   N+NNPTN P+
Subjt:  MASQQD-ISHSVGEAVGQAQVKKDE-----------------------------TGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANTNNPTNTPS

A0A6J1GQ03 late embryogenesis abundant protein 1-like

1.7e-10

52.53

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Query:  MASQQDISHSVGEAVGQAQVKKDE-------------------------------TGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANTNNPTNTPSPT
        MASQQD+S   GE VGQAQVKKDE                               TGEQVK+MAQGAAEAVKNTLGM TD+ +  + N NNPTN PSPT
Subjt:  MASQQDISHSVGEAVGQAQVKKDE-------------------------------TGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANTNNPTNTPSPT

A0A6J1HHY8 late embryogenesis abundant protein 1

2.0e-19

62.16

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Query:  MASQQDISHSVGEAVGQAQVKKDE------------------------------------------TGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANT
        MASQQDISHSVGEAVGQAQVKKDE                                          TGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANT
Subjt:  MASQQDISHSVGEAVGQAQVKKDE------------------------------------------TGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANT

Query:  NNPTNTPSPTI
        NNPTNTPSPTI
Subjt:  NNPTNTPSPTI

A0A6J1KJU5 late embryogenesis abundant protein 1

5.7e-19

61.26

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Query:  MASQQDISHSVGEAVGQAQVKKDE------------------------------------------TGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANT
        MASQQDISHSVGE VGQAQVKKDE                                          TGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANT
Subjt:  MASQQDISHSVGEAVGQAQVKKDE------------------------------------------TGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANT

Query:  NNPTNTPSPTI
        NNPTNTPSPTI
Subjt:  NNPTNTPSPTI

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G15415.1 The protein encoded by this gene was identified as a part of pollen proteome by mass spec analysis. It has weak homology to LEA (late embryo abundant) proteins. Encodes protein phosphatase 2A (PP2A) B'gamma subunit. Targeted to nucleus and cytosol.

4.0e-04

40.91

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Query:  MASQQDISHSV--GEAVGQAQVKKD-------------ETGEQVKNMAQGAAEAVKNTLGMNTDSS----SNAAANTNNPTNTPSPTI
        MAS QD   SV  G+ VGQA VK++             + GE+VK+MA  A+EAVKN LG+N D++    +    +  NP NT SP++
Subjt:  MASQQDISHSV--GEAVGQAQVKKD-------------ETGEQVKNMAQGAAEAVKNTLGMNTDSS----SNAAANTNNPTNTPSPTI

AT1G52680.1 late embryogenesis abundant protein-related / LEA protein-related

1.0e-04

33.63

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Query:  MASQQDISHSVGEAVGQAQVKKDE--------------------------------------------TGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAA
        M+S Q +SHS GE  GQ Q+KK+E                                            TG QVKNMAQGAA+AVKNTLGM+  ++S ++ 
Subjt:  MASQQDISHSVGEAVGQAQVKKDE--------------------------------------------TGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAA

Query:  NTNNPTNTPSPTI
             +N P   I
Subjt:  NTNNPTNTPSPTI

Sequences

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CDS sequence

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ATGGCAAGCCAACAAGACATTAGCCACAGCGTCGGCGAGGCCGTCGGCCAAGCTCAGGTGAAGAAGGATGAGACTGGAGAGCAAGTGAAGAACATGGCTCAAGGAGCAGC
TGAGGCAGTGAAAAACACTCTTGGGATGAACACTGATAGCAGTTCTAACGCCGCCGCCAACACCAACAACCCTACCAACACTCCATCCCCTACAATCTAA

mRNA sequence

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Protein sequence

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MASQQDISHSVGEAVGQAQVKKDETGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANTNNPTNTPSPTI

Carg18828 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome