; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg18835 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18835
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionDynein beta chain, ciliary protein
Genome locationCarg_Chr08:7453790..7456507
RNA-Seq ExpressionCarg18835
SyntenyCarg18835
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013632.1 hypothetical protein SDJN02_23799 [Cucurbita argyrosperma subsp. argyrosperma]9.9e-4668.12Show/hide
Query:  MESVVDWKPPPRAAEKARESGAHDS-VILEMCLRNEIYGLMPCLAIWLVE----TRSKPGSKLEMREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGT
        MESVVD KPPPRAAEKARESGA DS  +L     N +    P     L +     RSKPG KLEM E SVVERYDRPMP+  NTDLKSSKYEDR APPGT
Subjt:  MESVVDWKPPPRAAEKARESGAHDS-VILEMCLRNEIYGLMPCLAIWLVE----TRSKPGSKLEMREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGT

Query:  LNVAKMRHIILLNEGKADDFEGPICVHQIAERYNDVSVHQIQTILQFMSLPPEDSLLERK
        LNVA+MRHIILL+EGKA+D +GP+ V+QIAERYN V V QI+TILQF+SLPPEDSL ++K
Subjt:  LNVAKMRHIILLNEGKADDFEGPICVHQIAERYNDVSVHQIQTILQFMSLPPEDSLLERK

KAG7026303.1 hypothetical protein SDJN02_12804 [Cucurbita argyrosperma subsp. argyrosperma]2.3e-95100Show/hide
Query:  MESVVDWKPPPRAAEKARESGAHDSVILEMCLRNEIYGLMPCLAIWLVETRSKPGSKLEMREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGTLNVAK
        MESVVDWKPPPRAAEKARESGAHDSVILEMCLRNEIYGLMPCLAIWLVETRSKPGSKLEMREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGTLNVAK
Subjt:  MESVVDWKPPPRAAEKARESGAHDSVILEMCLRNEIYGLMPCLAIWLVETRSKPGSKLEMREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGTLNVAK

Query:  MRHIILLNEGKADDFEGPICVHQIAERYNDVSVHQIQTILQFMSLPPEDSLLERKGRILNNRNGAKKTREGALLP
        MRHIILLNEGKADDFEGPICVHQIAERYNDVSVHQIQTILQFMSLPPEDSLLERKGRILNNRNGAKKTREGALLP
Subjt:  MRHIILLNEGKADDFEGPICVHQIAERYNDVSVHQIQTILQFMSLPPEDSLLERKGRILNNRNGAKKTREGALLP

XP_022958820.1 uncharacterized protein LOC111459975 [Cucurbita moschata]2.2e-4567.5Show/hide
Query:  MESVVDWKPPPRAAEKARESGAHDS-VILEMCLRNEIYGLMPCLAIWLVE----TRSKPGSKLEMREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGT
        MESVVD KPPPRAAEKARESGA DS  +L     N +    P     L +     RSKPG KLEM E SVVERYDRPMP+  NTDLKSSKYEDR APPGT
Subjt:  MESVVDWKPPPRAAEKARESGAHDS-VILEMCLRNEIYGLMPCLAIWLVE----TRSKPGSKLEMREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGT

Query:  LNVAKMRHIILLNEGKADDFEGPICVHQIAERYNDVSVHQIQTILQFMSLPPEDSLLERK
        LNVA+MRHI+LL+EGKA+D +GP+ V+QIAERYN V V QI+TILQF+SLPPEDSL ++K
Subjt:  LNVAKMRHIILLNEGKADDFEGPICVHQIAERYNDVSVHQIQTILQFMSLPPEDSLLERK

XP_023000204.1 uncharacterized protein LOC111494494 [Cucurbita maxima]2.6e-6293.08Show/hide
Query:  VILEMCLRNEIYGLMPCLAIWLVETRSKPGSKLEMREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGTLNVAKMRHIILLNEGKADDFEGPICVHQIA
        VILEMCLRNEIYGLMPCLAIW VE RSKPGSKLE+REGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGTLNVA+MRHIILLNEGKADDFEGPICVHQIA
Subjt:  VILEMCLRNEIYGLMPCLAIWLVETRSKPGSKLEMREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGTLNVAKMRHIILLNEGKADDFEGPICVHQIA

Query:  ERYNDVSVHQIQTILQFMSLPPEDSLLERK
        ER N VSVHQIQTILQF+SLPPEDSL E+K
Subjt:  ERYNDVSVHQIQTILQFMSLPPEDSLLERK

XP_023006464.1 uncharacterized protein LOC111499180 [Cucurbita maxima]1.7e-4568.12Show/hide
Query:  MESVVDWKPPPRAAEKARESGAHDS-VILEMCLRNEIYGLMPCLAIWLVE----TRSKPGSKLEMREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGT
        MESVVD KPPPRAAEKARESG+ DS  +L     N +    P     L +     RSKPG KLEM E SVVERY+RPMPK  NTDLKSSKYEDR APPGT
Subjt:  MESVVDWKPPPRAAEKARESGAHDS-VILEMCLRNEIYGLMPCLAIWLVE----TRSKPGSKLEMREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGT

Query:  LNVAKMRHIILLNEGKADDFEGPICVHQIAERYNDVSVHQIQTILQFMSLPPEDSLLERK
        LNVA+MRHIILL+EGKADD +GP+ V+QIAERYN V V QI+TILQF+SLPPEDSL ++K
Subjt:  LNVAKMRHIILLNEGKADDFEGPICVHQIAERYNDVSVHQIQTILQFMSLPPEDSLLERK

TrEMBL top hitse value%identityAlignment
A0A0A0KCC5 Uncharacterized protein1.4e-4263.52Show/hide
Query:  MESVVDWKPPPRAAEKARESGAHDSVILEM-----CLRNEIYGLMPCLAIWLVETRSKPGSKLEMREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGT
        MES+VD KPPPR AEKARESGA DS  +        L          L+  +   +SKPG KLEM E SVVERY RPMPK  +T++ SSKYEDR APPGT
Subjt:  MESVVDWKPPPRAAEKARESGAHDSVILEM-----CLRNEIYGLMPCLAIWLVETRSKPGSKLEMREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGT

Query:  LNVAKMRHIILLNEGKADDFEGPICVHQIAERYNDVSVHQIQTILQFMSLPPEDSLLER
        LNVA+MR IILL+EGKADD +GP+ +HQIAERYN VSV QIQTILQF+SLPPEDSL ++
Subjt:  LNVAKMRHIILLNEGKADDFEGPICVHQIAERYNDVSVHQIQTILQFMSLPPEDSLLER

A0A1S3C957 uncharacterized protein LOC103497865 isoform X11.4e-4264.15Show/hide
Query:  MESVVDWKPPPRAAEKARESGAHDS-VILEMCLRNEIYGLMP----CLAIWLVETRSKPGSKLEMREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGT
        MES+VD KPPPR AEKARESG+ DS  +      N +    P     L+  +   +SKPG KLEM E SVVERY RPMPK  +T++KSSKYEDR APPGT
Subjt:  MESVVDWKPPPRAAEKARESGAHDS-VILEMCLRNEIYGLMP----CLAIWLVETRSKPGSKLEMREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGT

Query:  LNVAKMRHIILLNEGKADDFEGPICVHQIAERYNDVSVHQIQTILQFMSLPPEDSLLER
        LNVA+MR IILL+EGKADD +GP+  HQIAERYN VSV QIQTILQF+SLPPEDSL ++
Subjt:  LNVAKMRHIILLNEGKADDFEGPICVHQIAERYNDVSVHQIQTILQFMSLPPEDSLLER

A0A6J1H4J6 uncharacterized protein LOC1114599751.1e-4567.5Show/hide
Query:  MESVVDWKPPPRAAEKARESGAHDS-VILEMCLRNEIYGLMPCLAIWLVE----TRSKPGSKLEMREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGT
        MESVVD KPPPRAAEKARESGA DS  +L     N +    P     L +     RSKPG KLEM E SVVERYDRPMP+  NTDLKSSKYEDR APPGT
Subjt:  MESVVDWKPPPRAAEKARESGAHDS-VILEMCLRNEIYGLMPCLAIWLVE----TRSKPGSKLEMREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGT

Query:  LNVAKMRHIILLNEGKADDFEGPICVHQIAERYNDVSVHQIQTILQFMSLPPEDSLLERK
        LNVA+MRHI+LL+EGKA+D +GP+ V+QIAERYN V V QI+TILQF+SLPPEDSL ++K
Subjt:  LNVAKMRHIILLNEGKADDFEGPICVHQIAERYNDVSVHQIQTILQFMSLPPEDSLLERK

A0A6J1KJ83 uncharacterized protein LOC1114944941.3e-6293.08Show/hide
Query:  VILEMCLRNEIYGLMPCLAIWLVETRSKPGSKLEMREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGTLNVAKMRHIILLNEGKADDFEGPICVHQIA
        VILEMCLRNEIYGLMPCLAIW VE RSKPGSKLE+REGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGTLNVA+MRHIILLNEGKADDFEGPICVHQIA
Subjt:  VILEMCLRNEIYGLMPCLAIWLVETRSKPGSKLEMREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGTLNVAKMRHIILLNEGKADDFEGPICVHQIA

Query:  ERYNDVSVHQIQTILQFMSLPPEDSLLERK
        ER N VSVHQIQTILQF+SLPPEDSL E+K
Subjt:  ERYNDVSVHQIQTILQFMSLPPEDSLLERK

A0A6J1L288 uncharacterized protein LOC1114991808.2e-4668.12Show/hide
Query:  MESVVDWKPPPRAAEKARESGAHDS-VILEMCLRNEIYGLMPCLAIWLVE----TRSKPGSKLEMREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGT
        MESVVD KPPPRAAEKARESG+ DS  +L     N +    P     L +     RSKPG KLEM E SVVERY+RPMPK  NTDLKSSKYEDR APPGT
Subjt:  MESVVDWKPPPRAAEKARESGAHDS-VILEMCLRNEIYGLMPCLAIWLVE----TRSKPGSKLEMREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGT

Query:  LNVAKMRHIILLNEGKADDFEGPICVHQIAERYNDVSVHQIQTILQFMSLPPEDSLLERK
        LNVA+MRHIILL+EGKADD +GP+ V+QIAERYN V V QI+TILQF+SLPPEDSL ++K
Subjt:  LNVAKMRHIILLNEGKADDFEGPICVHQIAERYNDVSVHQIQTILQFMSLPPEDSLLERK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G21400.1 unknown protein8.7e-2441.67Show/hide
Query:  SVVDWKPPPRAAEKARESG---AHDSVILEMCLRNEIYGLMPCLAIWLVETRSKPGSKLEMREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGTLNVA
        S V   P   A +   + G   + D+V+ E   R+  Y  M  L   +   ++KPG K EM E SVVE   RP+PK  NT  +S++YE+   P GTLNVA
Subjt:  SVVDWKPPPRAAEKARESG---AHDSVILEMCLRNEIYGLMPCLAIWLVETRSKPGSKLEMREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGTLNVA

Query:  KMRHIILLNEGKADDFEGPICVHQIAERYNDVSVHQIQTILQFMSLPPEDSLLERK
        ++RHI+LL +GK+ D  GP+ V++IAE+Y  + V Q+Q I QF+SLP E +  ++K
Subjt:  KMRHIILLNEGKADDFEGPICVHQIAERYNDVSVHQIQTILQFMSLPPEDSLLERK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGTGTCGTCGATTGGAAACCTCCGCCGCGTGCGGCCGAGAAGGCTCGGGAGAGCGGCGCTCATGATTCTGTAATTCTGGAAATGTGCTTGAGGAACGAGATCTA
CGGTTTGATGCCATGCTTAGCCATATGGTTGGTCGAAACTAGATCAAAGCCTGGATCAAAACTTGAGATGAGGGAGGGCTCTGTGGTGGAGAGGTATGACAGGCCAATGC
CAAAGCAAATAAATACAGATCTAAAATCCAGTAAATACGAGGATCGCACAGCCCCACCAGGAACTTTAAATGTAGCAAAGATGCGCCACATAATCCTCCTAAATGAAGGA
AAGGCTGATGACTTCGAGGGGCCAATATGCGTTCACCAAATTGCTGAAAGGTATAATGATGTCAGCGTCCATCAAATACAGACGATTTTGCAGTTTATGTCTCTGCCACC
AGAGGACAGTCTTTTAGAGAGAAAAGGAAGGATCCTTAATAACAGGAATGGAGCCAAGAAAACGAGGGAAGGGGCGTTGCTCCCCTAA
mRNA sequenceShow/hide mRNA sequence
ACGTTCGCCCTCCAACTTGCTTTCATTTCAGGAACTTCGAAGCGGCTCGAGTTCGCAACTCAGTAAAATCGAGTCGCGACTCACCGATTCATTTCAATTTTCGTCTCCAT
TTCTCCGGAAAATTTAGTCGTTAAACCCTCCCACGCGTAGGGTTCTTGATTCTTACGCTGGTTCTGCGACAAATTTCGAATGATTCTGAATCTCCGATTCCAGTTCGTTC
AGTAAGATCGCTTCTAGTTTTGAACAAGGAAGCGATGGGATAGGTATTTCGTCGAGCGGCGGAAAGAATCAAGCCGGCTTGGAGCGTGGATTCCACTGCCTCTTCGTTGA
AAATGGAGAGTGTCGTCGATTGGAAACCTCCGCCGCGTGCGGCCGAGAAGGCTCGGGAGAGCGGCGCTCATGATTCTGTAATTCTGGAAATGTGCTTGAGGAACGAGATC
TACGGTTTGATGCCATGCTTAGCCATATGGTTGGTCGAAACTAGATCAAAGCCTGGATCAAAACTTGAGATGAGGGAGGGCTCTGTGGTGGAGAGGTATGACAGGCCAAT
GCCAAAGCAAATAAATACAGATCTAAAATCCAGTAAATACGAGGATCGCACAGCCCCACCAGGAACTTTAAATGTAGCAAAGATGCGCCACATAATCCTCCTAAATGAAG
GAAAGGCTGATGACTTCGAGGGGCCAATATGCGTTCACCAAATTGCTGAAAGGTATAATGATGTCAGCGTCCATCAAATACAGACGATTTTGCAGTTTATGTCTCTGCCA
CCAGAGGACAGTCTTTTAGAGAGAAAAGGAAGGATCCTTAATAACAGGAATGGAGCCAAGAAAACGAGGGAAGGGGCGTTGCTCCCCTAA
Protein sequenceShow/hide protein sequence
MESVVDWKPPPRAAEKARESGAHDSVILEMCLRNEIYGLMPCLAIWLVETRSKPGSKLEMREGSVVERYDRPMPKQINTDLKSSKYEDRTAPPGTLNVAKMRHIILLNEG
KADDFEGPICVHQIAERYNDVSVHQIQTILQFMSLPPEDSLLERKGRILNNRNGAKKTREGALLP