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Carg18838 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18838
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionflowering-promoting factor 1-like protein 1
Genome locationCarg_Chr08:7468151..7468486
RNA-Seq ExpressionCarg18838
SyntenyCarg18838
Gene Ontology termsGO:0009909 - regulation of flower development (biological process)
InterPro domainsIPR039274 - Flowering-promoting factor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593965.1 Flowering-promoting factor 1-like protein 1, partial [Cucurbita argyrosperma subsp. sororia]6.7e-5699.1Show/hide
Query:  MSGVWVFKNGVVRLVEDAGVDKANGGQRSTYRRKVLVYSPTEEVMTSYAELEQKLMALGWERYYDDPDLLQFHKRSTVHLISLPKEFAKFKSMHMYDIVV
        MSGVWVFKNGVVRLVEDAGVDKANGGQRSTYRRKVLVYSPTEEVMTSYAELEQ LMALGWERYYDDPDLLQFHKRSTVHLISLPKEFAKFKSMHMYDIVV
Subjt:  MSGVWVFKNGVVRLVEDAGVDKANGGQRSTYRRKVLVYSPTEEVMTSYAELEQKLMALGWERYYDDPDLLQFHKRSTVHLISLPKEFAKFKSMHMYDIVV

Query:  KNRNHFEVKDA
        KNRNHFEVKDA
Subjt:  KNRNHFEVKDA

KAG7026306.1 Flowering-promoting factor 1-like protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-56100Show/hide
Query:  MSGVWVFKNGVVRLVEDAGVDKANGGQRSTYRRKVLVYSPTEEVMTSYAELEQKLMALGWERYYDDPDLLQFHKRSTVHLISLPKEFAKFKSMHMYDIVV
        MSGVWVFKNGVVRLVEDAGVDKANGGQRSTYRRKVLVYSPTEEVMTSYAELEQKLMALGWERYYDDPDLLQFHKRSTVHLISLPKEFAKFKSMHMYDIVV
Subjt:  MSGVWVFKNGVVRLVEDAGVDKANGGQRSTYRRKVLVYSPTEEVMTSYAELEQKLMALGWERYYDDPDLLQFHKRSTVHLISLPKEFAKFKSMHMYDIVV

Query:  KNRNHFEVKDA
        KNRNHFEVKDA
Subjt:  KNRNHFEVKDA

XP_022930476.1 flowering-promoting factor 1-like protein 1 [Cucurbita moschata]1.1e-5598.2Show/hide
Query:  MSGVWVFKNGVVRLVEDAGVDKANGGQRSTYRRKVLVYSPTEEVMTSYAELEQKLMALGWERYYDDPDLLQFHKRSTVHLISLPKEFAKFKSMHMYDIVV
        MSGVWVFKNGVVRLVEDAGVDK NGGQRSTYRRKVLVYSPTEEVMTSYAELEQKLMALGWERYYDDPDLLQFHKRSTVHLISLPKEFAKF+SMHMYDIVV
Subjt:  MSGVWVFKNGVVRLVEDAGVDKANGGQRSTYRRKVLVYSPTEEVMTSYAELEQKLMALGWERYYDDPDLLQFHKRSTVHLISLPKEFAKFKSMHMYDIVV

Query:  KNRNHFEVKDA
        KNRNHFEVKDA
Subjt:  KNRNHFEVKDA

XP_022959407.1 flowering-promoting factor 1-like protein 3 [Cucurbita moschata]1.4e-4583.64Show/hide
Query:  MSGVWVFKNGVVRLVEDAGVDKANGGQRSTYRRKVLVYSPTEEVMTSYAELEQKLMALGWERYYDDPDLLQFHKRSTVHLISLPKEFAKFKSMHMYDIVV
        M+GVWVFKNGVVRLVE+AG D ++GGQRS  RRKVLV+  T EVMTSYA LEQKLM LGWERYYDDP+LLQFHKRSTVHLISLPK+FAKFKSMHMYDIVV
Subjt:  MSGVWVFKNGVVRLVEDAGVDKANGGQRSTYRRKVLVYSPTEEVMTSYAELEQKLMALGWERYYDDPDLLQFHKRSTVHLISLPKEFAKFKSMHMYDIVV

Query:  KNRNHFEVKD
        KNR+HFEV+D
Subjt:  KNRNHFEVKD

XP_023515130.1 flowering-promoting factor 1-like protein 1 [Cucurbita pepo subsp. pepo]3.3e-5598.2Show/hide
Query:  MSGVWVFKNGVVRLVEDAGVDKANGGQRSTYRRKVLVYSPTEEVMTSYAELEQKLMALGWERYYDDPDLLQFHKRSTVHLISLPKEFAKFKSMHMYDIVV
        MSGVWVFKNGVVRLVEDAGVDKA+GGQRSTYRRKVLVYSPTEEVMTSYAELEQKL ALGWERYYDDPDLLQFHKRSTVHLISLPKEFAKFKSMHMYDIVV
Subjt:  MSGVWVFKNGVVRLVEDAGVDKANGGQRSTYRRKVLVYSPTEEVMTSYAELEQKLMALGWERYYDDPDLLQFHKRSTVHLISLPKEFAKFKSMHMYDIVV

Query:  KNRNHFEVKDA
        KNRNHFEVKDA
Subjt:  KNRNHFEVKDA

TrEMBL top hitse value%identityAlignment
A0A1S3C8H5 flowering-promoting factor 1-like protein 12.4e-4380Show/hide
Query:  MSGVWVFKNGVVRLVEDAGVDKANGGQRSTYRRKVLVYSPTEEVMTSYAELEQKLMALGWERYYDDPDLLQFHKRSTVHLISLPKEFAKFKSMHMYDIVV
        MSGVWVF+NGVVRL+E+ G   A GGQ+S  RRK LV+SPT EVMTSY  LE+KL+ LGWERYYDDP+LLQFHKRSTVHLISLPK+FAKFKSMHMYDIVV
Subjt:  MSGVWVFKNGVVRLVEDAGVDKANGGQRSTYRRKVLVYSPTEEVMTSYAELEQKLMALGWERYYDDPDLLQFHKRSTVHLISLPKEFAKFKSMHMYDIVV

Query:  KNRNHFEVKD
        KNRNHFEV D
Subjt:  KNRNHFEVKD

A0A6J1CAV7 flowering-promoting factor 1-like protein 15.4e-4382.14Show/hide
Query:  MSGVWVFKNGVVRLVEDAGVDKANGGQRST-YRRKVLVYSPTEEVMTSYAELEQKLMALGWERYYDDPDLLQFHKRSTVHLISLPKEFAKFKSMHMYDIV
        MSGVWVFKNGVVRLV+    + A+GGQR+   RRKVLVY PT EVMTSYA LEQKLM LGWERYYDDP++LQFHKRSTVHLISLPK+FAKFKSMHMYDIV
Subjt:  MSGVWVFKNGVVRLVEDAGVDKANGGQRST-YRRKVLVYSPTEEVMTSYAELEQKLMALGWERYYDDPDLLQFHKRSTVHLISLPKEFAKFKSMHMYDIV

Query:  VKNRNHFEVKDA
        VKNR+HFEVKDA
Subjt:  VKNRNHFEVKDA

A0A6J1ER18 flowering-promoting factor 1-like protein 15.5e-5698.2Show/hide
Query:  MSGVWVFKNGVVRLVEDAGVDKANGGQRSTYRRKVLVYSPTEEVMTSYAELEQKLMALGWERYYDDPDLLQFHKRSTVHLISLPKEFAKFKSMHMYDIVV
        MSGVWVFKNGVVRLVEDAGVDK NGGQRSTYRRKVLVYSPTEEVMTSYAELEQKLMALGWERYYDDPDLLQFHKRSTVHLISLPKEFAKF+SMHMYDIVV
Subjt:  MSGVWVFKNGVVRLVEDAGVDKANGGQRSTYRRKVLVYSPTEEVMTSYAELEQKLMALGWERYYDDPDLLQFHKRSTVHLISLPKEFAKFKSMHMYDIVV

Query:  KNRNHFEVKDA
        KNRNHFEVKDA
Subjt:  KNRNHFEVKDA

A0A6J1H4F8 flowering-promoting factor 1-like protein 36.8e-4683.64Show/hide
Query:  MSGVWVFKNGVVRLVEDAGVDKANGGQRSTYRRKVLVYSPTEEVMTSYAELEQKLMALGWERYYDDPDLLQFHKRSTVHLISLPKEFAKFKSMHMYDIVV
        M+GVWVFKNGVVRLVE+AG D ++GGQRS  RRKVLV+  T EVMTSYA LEQKLM LGWERYYDDP+LLQFHKRSTVHLISLPK+FAKFKSMHMYDIVV
Subjt:  MSGVWVFKNGVVRLVEDAGVDKANGGQRSTYRRKVLVYSPTEEVMTSYAELEQKLMALGWERYYDDPDLLQFHKRSTVHLISLPKEFAKFKSMHMYDIVV

Query:  KNRNHFEVKD
        KNR+HFEV+D
Subjt:  KNRNHFEVKD

A0A6J1KVW8 flowering-promoting factor 1-like protein 32.0e-4582.73Show/hide
Query:  MSGVWVFKNGVVRLVEDAGVDKANGGQRSTYRRKVLVYSPTEEVMTSYAELEQKLMALGWERYYDDPDLLQFHKRSTVHLISLPKEFAKFKSMHMYDIVV
        M+GVWVFKNGVVRLVE+ G D ++GGQRS  RRKVLV+  T EVMTSYA LEQKLM LGWERYYDDP+LLQFHKRSTVHLISLPK+FAKFKSMHMYDIVV
Subjt:  MSGVWVFKNGVVRLVEDAGVDKANGGQRSTYRRKVLVYSPTEEVMTSYAELEQKLMALGWERYYDDPDLLQFHKRSTVHLISLPKEFAKFKSMHMYDIVV

Query:  KNRNHFEVKD
        KNR+HFEV+D
Subjt:  KNRNHFEVKD

SwissProt top hitse value%identityAlignment
O23624 Flowering-promoting factor 15.4e-3261.06Show/hide
Query:  MSGVWVFKNGVVRLVEDAGVDKANGGQRSTYRRKVLVYSPTEEVMTSYAELEQKLMALGWERYY--DDPDLLQFHKRSTVHLISLPKEFAKFKSMHMYDI
        MSGVWVFKNGV+RLVE+        G  +  RRKV+VY PT EV++SY+ LEQ L +LGWERY+   D DLLQFHKRS++ LISLP++F KF S++MYDI
Subjt:  MSGVWVFKNGVVRLVEDAGVDKANGGQRSTYRRKVLVYSPTEEVMTSYAELEQKLMALGWERYY--DDPDLLQFHKRSTVHLISLPKEFAKFKSMHMYDI

Query:  VVKNRNHFEVKDA
        VVKN N+F V+D+
Subjt:  VVKNRNHFEVKDA

O24340 Flowering-promoting factor 13.2e-3262.83Show/hide
Query:  MSGVWVFKNGVVRLVEDAGVDKANGGQRSTYRRKVLVYSPTEEVMTSYAELEQKLMALGWERYY--DDPDLLQFHKRSTVHLISLPKEFAKFKSMHMYDI
        MSGVWVFKNGV+RLVE+      +GG  ++ RRKV+VY PT EV++SY+ LEQ L +LGWERY+   D DLLQFHKRS++ LISLPK+F KF S++MYDI
Subjt:  MSGVWVFKNGVVRLVEDAGVDKANGGQRSTYRRKVLVYSPTEEVMTSYAELEQKLMALGWERYY--DDPDLLQFHKRSTVHLISLPKEFAKFKSMHMYDI

Query:  VVKNRNHFEVKDA
        VVKN N+F V+D+
Subjt:  VVKNRNHFEVKDA

Q0E1D7 Flowering-promoting factor 1-like protein 32.4e-3261.06Show/hide
Query:  MSGVWVFKNGVVRLVEDAGVDKAN--GGQRSTYRRKVLVYSPTEEVMTSYAELEQKLMALGWERYYDDPDLLQFHKRSTVHLISLPKEFAKFKSMHMYDI
        M+GVWVFK+G+VR VE+ G ++++  G      RRKVLV+ P+ EV+ SY  LE++L  LGWERY  DP LLQFH+RSTVHLIS+P++F+KFK +HMYDI
Subjt:  MSGVWVFKNGVVRLVEDAGVDKAN--GGQRSTYRRKVLVYSPTEEVMTSYAELEQKLMALGWERYYDDPDLLQFHKRSTVHLISLPKEFAKFKSMHMYDI

Query:  VVKNRNHFEVKDA
        VVK RN FEV+DA
Subjt:  VVKNRNHFEVKDA

Q9LGE3 Flowering-promoting factor 1-like protein 19.2e-3261.74Show/hide
Query:  MSGVWVFKNGVVRLVE----DAGVDKANGGQRSTYRRKVLVYSPTEEVMTSYAELEQKLMALGWERYYDDPDLLQFHKRSTVHLISLPKEFAKFKSMHMY
        MSGVWVFKNGVVRLVE     AG   A G      RRK LV++P+ +V++SYA LE +L ALGWERYY+DP L QFHKR ++ LISLP +F+ F S+HMY
Subjt:  MSGVWVFKNGVVRLVE----DAGVDKANGGQRSTYRRKVLVYSPTEEVMTSYAELEQKLMALGWERYYDDPDLLQFHKRSTVHLISLPKEFAKFKSMHMY

Query:  DIVVKNRNHFEVKDA
        DIVVKNR+ F V DA
Subjt:  DIVVKNRNHFEVKDA

Q9LXB5 Flowering-promoting factor 1-like protein 21.5e-2958.56Show/hide
Query:  MSGVWVFKNGVVRLVEDAGVDKANGGQRSTYRRKVLVYSPTEEVMTSYAELEQKLMALGWERYYD-DPDLLQFHKRSTVHLISLPKEFAKFKSMHMYDIV
        MSGVWVF NGV+RLVE+          +S  RR VLVY PT E ++SY+ LEQ L +LGWERY+  D DL+Q+HKRS++ LISLP++F+KF S++MYDIV
Subjt:  MSGVWVFKNGVVRLVEDAGVDKANGGQRSTYRRKVLVYSPTEEVMTSYAELEQKLMALGWERYYD-DPDLLQFHKRSTVHLISLPKEFAKFKSMHMYDIV

Query:  VKNRNHFEVKD
        VKN N F V+D
Subjt:  VKNRNHFEVKD

Arabidopsis top hitse value%identityAlignment
AT4G31380.1 FPF1-like protein 11.5e-2956.91Show/hide
Query:  MSGVWVF-KNGVVRLVE--------DAGVDKANGG-QRSTYRRKVLVYSPTEEVMTSYAELEQKLMALGWERYY--DDPD-LLQFHKRSTVHLISLPKEF
        MSGVWVF KNGV+RLVE        D+    ++GG Q+   RRK+LV+ P+ EV++SY  LE+ L  LGWERYY  D+ D LLQFHKR+++ LISLP++F
Subjt:  MSGVWVF-KNGVVRLVE--------DAGVDKANGG-QRSTYRRKVLVYSPTEEVMTSYAELEQKLMALGWERYY--DDPD-LLQFHKRSTVHLISLPKEF

Query:  AKFKSMHMYDIVVKNRNHFEVKD
        +KF S+HMYDIVVKN N F V+D
Subjt:  AKFKSMHMYDIVVKNRNHFEVKD

AT5G10625.1 BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:AT5G24860.1)1.0e-3058.56Show/hide
Query:  MSGVWVFKNGVVRLVEDAGVDKANGGQRSTYRRKVLVYSPTEEVMTSYAELEQKLMALGWERYYD-DPDLLQFHKRSTVHLISLPKEFAKFKSMHMYDIV
        MSGVWVF NGV+RLVE+          +S  RR VLVY PT E ++SY+ LEQ L +LGWERY+  D DL+Q+HKRS++ LISLP++F+KF S++MYDIV
Subjt:  MSGVWVFKNGVVRLVEDAGVDKANGGQRSTYRRKVLVYSPTEEVMTSYAELEQKLMALGWERYYD-DPDLLQFHKRSTVHLISLPKEFAKFKSMHMYDIV

Query:  VKNRNHFEVKD
        VKN N F V+D
Subjt:  VKNRNHFEVKD

AT5G24860.1 flowering promoting factor 13.8e-3361.06Show/hide
Query:  MSGVWVFKNGVVRLVEDAGVDKANGGQRSTYRRKVLVYSPTEEVMTSYAELEQKLMALGWERYY--DDPDLLQFHKRSTVHLISLPKEFAKFKSMHMYDI
        MSGVWVFKNGV+RLVE+        G  +  RRKV+VY PT EV++SY+ LEQ L +LGWERY+   D DLLQFHKRS++ LISLP++F KF S++MYDI
Subjt:  MSGVWVFKNGVVRLVEDAGVDKANGGQRSTYRRKVLVYSPTEEVMTSYAELEQKLMALGWERYY--DDPDLLQFHKRSTVHLISLPKEFAKFKSMHMYDI

Query:  VVKNRNHFEVKDA
        VVKN N+F V+D+
Subjt:  VVKNRNHFEVKDA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGGCGTTTGGGTGTTCAAAAACGGCGTCGTTCGTCTGGTGGAGGACGCCGGAGTGGATAAGGCGAATGGCGGGCAGAGGTCGACGTATCGCCGGAAAGTGCTGGT
GTACAGTCCGACGGAGGAGGTGATGACGTCATATGCGGAGCTGGAACAGAAACTGATGGCGTTGGGTTGGGAACGTTATTACGACGATCCAGATCTGCTGCAATTTCACA
AGAGATCGACTGTCCATCTCATTTCTCTGCCCAAAGAATTCGCCAAGTTCAAATCCATGCACATGTACGACATCGTAGTTAAAAATCGAAACCATTTCGAAGTTAAAGAT
GCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGGCGTTTGGGTGTTCAAAAACGGCGTCGTTCGTCTGGTGGAGGACGCCGGAGTGGATAAGGCGAATGGCGGGCAGAGGTCGACGTATCGCCGGAAAGTGCTGGT
GTACAGTCCGACGGAGGAGGTGATGACGTCATATGCGGAGCTGGAACAGAAACTGATGGCGTTGGGTTGGGAACGTTATTACGACGATCCAGATCTGCTGCAATTTCACA
AGAGATCGACTGTCCATCTCATTTCTCTGCCCAAAGAATTCGCCAAGTTCAAATCCATGCACATGTACGACATCGTAGTTAAAAATCGAAACCATTTCGAAGTTAAAGAT
GCCTAA
Protein sequenceShow/hide protein sequence
MSGVWVFKNGVVRLVEDAGVDKANGGQRSTYRRKVLVYSPTEEVMTSYAELEQKLMALGWERYYDDPDLLQFHKRSTVHLISLPKEFAKFKSMHMYDIVVKNRNHFEVKD
A