; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg18854 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18854
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr08:7556403..7557063
RNA-Seq ExpressionCarg18854
SyntenyCarg18854
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593981.1 hypothetical protein SDJN03_13457, partial [Cucurbita argyrosperma subsp. sororia]2.4e-9598.89Show/hide
Query:  MSSKSPVFPFPEPQHYSDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDSIKTKKKKRWWKNALLFFKWKWVQHQNDAVFTHHHDVHQA
        MSSKSPVFPFPEPQHYSDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDS KTKKKKRWWKNALLFFKWKWVQHQNDAVFTHHHDVHQA
Subjt:  MSSKSPVFPFPEPQHYSDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDSIKTKKKKRWWKNALLFFKWKWVQHQNDAVFTHHHDVHQA

Query:  RARAFRASISGPVYVTESRSASNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT
        RARAFRASISGPVYVTESRS SNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT
Subjt:  RARAFRASISGPVYVTESRSASNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT

KAG7026322.1 hypothetical protein SDJN02_12823, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-96100Show/hide
Query:  MSSKSPVFPFPEPQHYSDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDSIKTKKKKRWWKNALLFFKWKWVQHQNDAVFTHHHDVHQA
        MSSKSPVFPFPEPQHYSDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDSIKTKKKKRWWKNALLFFKWKWVQHQNDAVFTHHHDVHQA
Subjt:  MSSKSPVFPFPEPQHYSDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDSIKTKKKKRWWKNALLFFKWKWVQHQNDAVFTHHHDVHQA

Query:  RARAFRASISGPVYVTESRSASNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT
        RARAFRASISGPVYVTESRSASNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT
Subjt:  RARAFRASISGPVYVTESRSASNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT

XP_022930362.1 uncharacterized protein LOC111436831 [Cucurbita moschata]5.3e-9598.33Show/hide
Query:  MSSKSPVFPFPEPQHYSDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDSIKTKKKKRWWKNALLFFKWKWVQHQNDAVFTHHHDVHQA
        MSSKSPVFPFPEPQH+SDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDSIKTKKKKRWWKNALLFFKWKWV HQNDAVFTHHHDVHQA
Subjt:  MSSKSPVFPFPEPQHYSDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDSIKTKKKKRWWKNALLFFKWKWVQHQNDAVFTHHHDVHQA

Query:  RARAFRASISGPVYVTESRSASNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT
        RARAFRASISGPVYVTESRS SNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT
Subjt:  RARAFRASISGPVYVTESRSASNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT

XP_023000154.1 uncharacterized protein LOC111494438 [Cucurbita maxima]2.6e-9496.67Show/hide
Query:  MSSKSPVFPFPEPQHYSDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDSIKTKKKKRWWKNALLFFKWKWVQHQNDAVFTHHHDVHQA
        MSSKSPVFPFPEPQH+SDYGFDPQ+DYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDSIKTKKKKRWWKNALLFFKWKW+ HQNDAVFTHHHDVHQA
Subjt:  MSSKSPVFPFPEPQHYSDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDSIKTKKKKRWWKNALLFFKWKWVQHQNDAVFTHHHDVHQA

Query:  RARAFRASISGPVYVTESRSASNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT
        RARAFRASISGPVYVTESRS SNTPLRSTTRPTSGPLAGTLTPTRK+DIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT
Subjt:  RARAFRASISGPVYVTESRSASNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT

XP_038875477.1 uncharacterized protein LOC120067919 [Benincasa hispida]3.1e-7985.87Show/hide
Query:  MSSKSPVFPFP-EPQHYSDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDSIKT--KKKKRWWKNALLFFKWKWV-QHQNDAVFTHHHD
        MS+KSPVFPFP EPQH+SDYGFDPQ+DYFQVLEEARKHRRE SRSIDSIHFKLQKPISKDDS     KKKKRWWKNA LFFKWKW+  HQNDA F HH D
Subjt:  MSSKSPVFPFP-EPQHYSDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDSIKT--KKKKRWWKNALLFFKWKWV-QHQNDAVFTHHHD

Query:  VHQARARAFRASISGPVYVTESRSASNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT
        VHQARARAFRASISGPVY+TESRS S TP RSTTRP+SGPLAGTLTPTRK D+QIPYLSLRELNMEQQQYR STSA MPIYLVT
Subjt:  VHQARARAFRASISGPVYVTESRSASNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT

TrEMBL top hitse value%identityAlignment
A0A0A0KCH6 Uncharacterized protein3.8e-7883.87Show/hide
Query:  MSSKSPVFPFP-EPQHYSDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDS--IKTKKKKRWWKNALLFFKWKW--VQHQNDAV-FTHH
        MS+KSPVFPFP EPQH+SDYGFDPQ+DYFQVLEEARKHRRE SRSIDS+HFKLQKPISKDDS  I  KKKKRWWKNA LFFKWKW  + HQNDA  F H 
Subjt:  MSSKSPVFPFP-EPQHYSDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDS--IKTKKKKRWWKNALLFFKWKW--VQHQNDAV-FTHH

Query:  HDVHQARARAFRASISGPVYVTESRSASNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT
         DVHQARARAFRASISGPVYVTESRS S+TP RSTTRP+SGPLAGTLTPTRK D++IPYLSLRELNMEQQQYR S+SA MPIYLVT
Subjt:  HDVHQARARAFRASISGPVYVTESRSASNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT

A0A1S3C7T3 uncharacterized protein LOC1034978357.6e-7984.86Show/hide
Query:  MSSKSPVFPFP-EPQHYSDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDS--IKTKKKKRWWKNALLFFKWKW--VQHQNDAVFTHHH
        MS+KSPVFPFP EPQH+SDYGFDPQ+DYFQVLEEARKHRRE SRSIDSIHFKLQKPISKDDS  I  KKKKRWWKNALLFFKWKW  + HQNDA    H 
Subjt:  MSSKSPVFPFP-EPQHYSDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDS--IKTKKKKRWWKNALLFFKWKW--VQHQNDAVFTHHH

Query:  DVHQARARAFRASISGPVYVTESRSASNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT
        DVHQARARAFRASISGPVYVTESRS S+TP RSTTRP+SGPLAGTLTPTRK D++IPYLSLRELNMEQQQYR S+SA MPIYLVT
Subjt:  DVHQARARAFRASISGPVYVTESRSASNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT

A0A6J1EQ93 uncharacterized protein LOC1114368312.6e-9598.33Show/hide
Query:  MSSKSPVFPFPEPQHYSDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDSIKTKKKKRWWKNALLFFKWKWVQHQNDAVFTHHHDVHQA
        MSSKSPVFPFPEPQH+SDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDSIKTKKKKRWWKNALLFFKWKWV HQNDAVFTHHHDVHQA
Subjt:  MSSKSPVFPFPEPQHYSDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDSIKTKKKKRWWKNALLFFKWKWVQHQNDAVFTHHHDVHQA

Query:  RARAFRASISGPVYVTESRSASNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT
        RARAFRASISGPVYVTESRS SNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT
Subjt:  RARAFRASISGPVYVTESRSASNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT

A0A6J1KJ37 uncharacterized protein LOC1114944381.3e-9496.67Show/hide
Query:  MSSKSPVFPFPEPQHYSDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDSIKTKKKKRWWKNALLFFKWKWVQHQNDAVFTHHHDVHQA
        MSSKSPVFPFPEPQH+SDYGFDPQ+DYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDSIKTKKKKRWWKNALLFFKWKW+ HQNDAVFTHHHDVHQA
Subjt:  MSSKSPVFPFPEPQHYSDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDSIKTKKKKRWWKNALLFFKWKWVQHQNDAVFTHHHDVHQA

Query:  RARAFRASISGPVYVTESRSASNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT
        RARAFRASISGPVYVTESRS SNTPLRSTTRPTSGPLAGTLTPTRK+DIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT
Subjt:  RARAFRASISGPVYVTESRSASNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT

A0A7J7E0Q9 Uncharacterized protein1.9e-6971.13Show/hide
Query:  MSSKSPVFPFPEPQHYSDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDSIKT--KKKKRWWKNALLFFKWKWVQ-HQNDAVFTHHH--
        MS+KSP+FP P+ +H+SDYGFDPQ+DYFQVLEEARKH+R+ SRSIDS+HFKLQKPISKD+S +T   KKK WW+NALLFFKWKW   H +     HHH  
Subjt:  MSSKSPVFPFPEPQHYSDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDSIKT--KKKKRWWKNALLFFKWKWVQ-HQNDAVFTHHH--

Query:  ---------DVHQARARAFRASISGPVYVTESRSASNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT
                 DVH+ARA+AFRASISGPVY+TESRS S+TP RST+RP+SGPLAGTLTP+R  D++IPYLSLRELNMEQQQ+R STSAAMPIYLVT
Subjt:  ---------DVHQARARAFRASISGPVYVTESRSASNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G06840.1 unknown protein5.1e-4355.5Show/hide
Query:  MSSKSPVFPFPEPQHYSDYGFDPQLDYFQVLEEARKHRREGSRS--IDSIHFKLQKPISKDDSIKT------KKKKRWWKNALLFFKW-KWVQHQNDAVF
        MS+ SP+F     QH+SDYGFDPQL YFQV+EEARKH+RE S     + + FK+QKPISKD+  ++      KKK+ WWK AL FFKW KW    +    
Subjt:  MSSKSPVFPFPEPQHYSDYGFDPQLDYFQVLEEARKHRREGSRS--IDSIHFKLQKPISKDDSIKT------KKKKRWWKNALLFFKW-KWVQHQNDAVF

Query:  THHHDVHQARARAFRASISGPVYVTESR-SASNTPLRSTT-RPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT
             V   R+     S+SGP+Y TES  S SNTP R+TT +P+SGP+AGTLTP RK D+ IPYLSLRELNMEQ Q R S S++ PIYLVT
Subjt:  THHHDVHQARARAFRASISGPVYVTESR-SASNTPLRSTT-RPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT

AT5G49170.1 unknown protein2.0e-3954.15Show/hide
Query:  MSSK--SPVFPFPEPQHYSDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDSIKT------KKKKRW-W-KNALLFFKW-KWV------
        MS+K  SP+FP  + QH+SDYGFDPQ+ YFQVLEEA+KH+   S SID+  FKLQKPISKDD I+T      K KKRW W KNAL FFKW KW       
Subjt:  MSSK--SPVFPFPEPQHYSDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDSIKT------KKKKRW-W-KNALLFFKW-KWV------

Query:  -----QHQNDAVFTHHHDVHQARARAFRA-SISGPVYVTESRSASNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAM--P
             ++  D  F    DVH ARAR FRA SISGPVYVTES S S+TP R  T  ++                + YLSLRELNME+QQ R +TS++M  P
Subjt:  -----QHQNDAVFTHHHDVHQARARAFRA-SISGPVYVTESRSASNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAM--P

Query:  IYLVT
        IYLVT
Subjt:  IYLVT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCTCCAAATCCCCTGTATTTCCCTTCCCTGAACCTCAACACTACAGCGACTATGGCTTCGATCCTCAACTCGACTATTTTCAGGTTTTGGAAGAAGCAAGGAAACA
CAGACGCGAGGGTTCGAGATCCATTGACTCCATTCATTTCAAGCTCCAAAAGCCTATTTCCAAAGACGATTCTATCAAAACCAAGAAGAAAAAACGGTGGTGGAAAAACG
CTCTTCTCTTCTTCAAATGGAAATGGGTTCAACACCAAAACGACGCTGTTTTCACCCACCACCACGACGTTCACCAAGCCAGAGCACGAGCTTTCCGCGCCTCCATCTCC
GGTCCGGTTTACGTAACTGAAAGCCGTAGCGCTTCCAACACGCCGTTACGTTCCACCACCCGACCGACATCCGGTCCACTCGCTGGAACGCTAACGCCGACGAGAAAATC
CGACATCCAAATTCCGTATCTCAGCCTCCGAGAACTGAACATGGAGCAACAACAATACAGAAATTCCACGTCAGCAGCCATGCCCATTTACTTAGTCACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCTCCAAATCCCCTGTATTTCCCTTCCCTGAACCTCAACACTACAGCGACTATGGCTTCGATCCTCAACTCGACTATTTTCAGGTTTTGGAAGAAGCAAGGAAACA
CAGACGCGAGGGTTCGAGATCCATTGACTCCATTCATTTCAAGCTCCAAAAGCCTATTTCCAAAGACGATTCTATCAAAACCAAGAAGAAAAAACGGTGGTGGAAAAACG
CTCTTCTCTTCTTCAAATGGAAATGGGTTCAACACCAAAACGACGCTGTTTTCACCCACCACCACGACGTTCACCAAGCCAGAGCACGAGCTTTCCGCGCCTCCATCTCC
GGTCCGGTTTACGTAACTGAAAGCCGTAGCGCTTCCAACACGCCGTTACGTTCCACCACCCGACCGACATCCGGTCCACTCGCTGGAACGCTAACGCCGACGAGAAAATC
CGACATCCAAATTCCGTATCTCAGCCTCCGAGAACTGAACATGGAGCAACAACAATACAGAAATTCCACGTCAGCAGCCATGCCCATTTACTTAGTCACTTGA
Protein sequenceShow/hide protein sequence
MSSKSPVFPFPEPQHYSDYGFDPQLDYFQVLEEARKHRREGSRSIDSIHFKLQKPISKDDSIKTKKKKRWWKNALLFFKWKWVQHQNDAVFTHHHDVHQARARAFRASIS
GPVYVTESRSASNTPLRSTTRPTSGPLAGTLTPTRKSDIQIPYLSLRELNMEQQQYRNSTSAAMPIYLVT