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Carg18856 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18856
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr08:7562358..7563486
RNA-Seq ExpressionCarg18856
SyntenyCarg18856
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593984.1 Multiple organellar RNA editing factor 3, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]8.8e-1197.37Show/hide
Query:  MSLRDGEIKAPQADQVAATAKPSGTAEQPPWKMRENPV
        MSLRDGEIKAPQADQVAA AKPSGTAEQPPWKMRENPV
Subjt:  MSLRDGEIKAPQADQVAATAKPSGTAEQPPWKMRENPV

KAG7026324.1 hypothetical protein SDJN02_12825, partial [Cucurbita argyrosperma subsp. argyrosperma]4.3e-58100Show/hide
Query:  MSLRDGEIKAPQADQVAATAKPSGTAEQPPWKMRENPVVIVNRCPVVSPSGQKIYRIPIKGELKFDHYLIHSIFRFDLKLGGPDAPHSTILLPTGSIDLQ
        MSLRDGEIKAPQADQVAATAKPSGTAEQPPWKMRENPVVIVNRCPVVSPSGQKIYRIPIKGELKFDHYLIHSIFRFDLKLGGPDAPHSTILLPTGSIDLQ
Subjt:  MSLRDGEIKAPQADQVAATAKPSGTAEQPPWKMRENPVVIVNRCPVVSPSGQKIYRIPIKGELKFDHYLIHSIFRFDLKLGGPDAPHSTILLPTGSIDLQ

Query:  KRRYSLMAANTSTG
        KRRYSLMAANTSTG
Subjt:  KRRYSLMAANTSTG

XP_023514439.1 multiple organellar RNA editing factor 3, mitochondrial-like [Cucurbita pepo subsp. pepo]4.0e-1998.04Show/hide
Query:  MSLRDGEIKAPQADQVAATAKPSGTAEQPPWKMRENPVVIVNRCPVVSPSG
        MSLRDGEIKAPQADQ AATAKPSGTAEQPPWKMRENPVVIVNRCPVVSPSG
Subjt:  MSLRDGEIKAPQADQVAATAKPSGTAEQPPWKMRENPVVIVNRCPVVSPSG

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCTGAGAGATGGAGAAATTAAGGCTCCTCAAGCTGACCAGGTGGCGGCTACCGCGAAGCCATCGGGTACGGCGGAGCAACCACCGTGGAAGATGAGAGAAAATCC
GGTGGTGATCGTGAACCGCTGTCCCGTCGTCTCACCCTCCGGCCAAAAGATTTACCGAATCCCGATAAAGGGAGAACTAAAGTTTGATCACTACTTAATCCATTCAATCT
TCCGGTTCGATTTAAAACTTGGGGGTCCGGATGCTCCCCACTCAACGATCCTTCTCCCAACTGGATCAATCGACCTCCAAAAGAGACGATACTCCTTGATGGCTGCGAAT
ACGAGCACAGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCTGAGAGATGGAGAAATTAAGGCTCCTCAAGCTGACCAGGTGGCGGCTACCGCGAAGCCATCGGGTACGGCGGAGCAACCACCGTGGAAGATGAGAGAAAATCC
GGTGGTGATCGTGAACCGCTGTCCCGTCGTCTCACCCTCCGGCCAAAAGATTTACCGAATCCCGATAAAGGGAGAACTAAAGTTTGATCACTACTTAATCCATTCAATCT
TCCGGTTCGATTTAAAACTTGGGGGTCCGGATGCTCCCCACTCAACGATCCTTCTCCCAACTGGATCAATCGACCTCCAAAAGAGACGATACTCCTTGATGGCTGCGAAT
ACGAGCACAGGCTGA
Protein sequenceShow/hide protein sequence
MSLRDGEIKAPQADQVAATAKPSGTAEQPPWKMRENPVVIVNRCPVVSPSGQKIYRIPIKGELKFDHYLIHSIFRFDLKLGGPDAPHSTILLPTGSIDLQKRRYSLMAAN
TSTG