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Carg18857 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18857
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionmultiple organellar RNA editing factor 3, mitochondrial
Genome locationCarg_Chr08:7563492..7565490
RNA-Seq ExpressionCarg18857
SyntenyCarg18857
Gene Ontology termsGO:0006397 - mRNA processing (biological process)
GO:0016554 - cytidine to uridine editing (biological process)
GO:0080156 - mitochondrial mRNA modification (biological process)
GO:0005739 - mitochondrion (cellular component)
InterPro domainsIPR039206 - MORF/ORRM1/DAG-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593984.1 Multiple organellar RNA editing factor 3, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]1.9e-5298.13Show/hide
Query:  MEFPNDPKPTEEEMVNSYVKTLAAVVGRHRIKNGFKEEARKEIYSVSTSTYTGFGALIREELSYKAILCVFVNWQAFYGFYLIHISMFQTQVICLLLERS
        MEFPNDPKPTEEEMVNSYVKTLAAVVGRHRIKNGF+EEARKEIYSVSTSTYTGFGALIREELSY AILCVFVNWQAFYGFYLIHISMFQTQVICLLLERS
Subjt:  MEFPNDPKPTEEEMVNSYVKTLAAVVGRHRIKNGFKEEARKEIYSVSTSTYTGFGALIREELSYKAILCVFVNWQAFYGFYLIHISMFQTQVICLLLERS

Query:  SPETTKW
        SPETTKW
Subjt:  SPETTKW

KAG7026325.1 Multiple organellar RNA editing factor 3, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-53100Show/hide
Query:  MEFPNDPKPTEEEMVNSYVKTLAAVVGRHRIKNGFKEEARKEIYSVSTSTYTGFGALIREELSYKAILCVFVNWQAFYGFYLIHISMFQTQVICLLLERS
        MEFPNDPKPTEEEMVNSYVKTLAAVVGRHRIKNGFKEEARKEIYSVSTSTYTGFGALIREELSYKAILCVFVNWQAFYGFYLIHISMFQTQVICLLLERS
Subjt:  MEFPNDPKPTEEEMVNSYVKTLAAVVGRHRIKNGFKEEARKEIYSVSTSTYTGFGALIREELSYKAILCVFVNWQAFYGFYLIHISMFQTQVICLLLERS

Query:  SPETTKW
        SPETTKW
Subjt:  SPETTKW

XP_022930369.1 multiple organellar RNA editing factor 3, mitochondrial-like isoform X2 [Cucurbita moschata]8.0e-3094.52Show/hide
Query:  MEFPNDPKPTEEEMVNSYVKTLAAVVGRHRIKNGFKEEARKEIYSVSTSTYTGFGALIREELSYKAILCVFVN
        MEFPN+ KPTEEEMVNSYVKTLAAVVGRHRIKNGF+EEARKEIYSVSTSTYTGFGALIREELSYKAILCVFV+
Subjt:  MEFPNDPKPTEEEMVNSYVKTLAAVVGRHRIKNGFKEEARKEIYSVSTSTYTGFGALIREELSYKAILCVFVN

XP_023514439.1 multiple organellar RNA editing factor 3, mitochondrial-like [Cucurbita pepo subsp. pepo]7.5e-2079.71Show/hide
Query:  MEFPNDPKPTEEEMVNSYVKTLAAVVGRHRIKNGFKEEARKEIYSVSTSTYTGFGALIREELSYKAILC
        MEFPN+ KPTEEEMVNSY+KTLAAVVG        +EEA+KEIYSVST+TYTGFGALIREELSYKAILC
Subjt:  MEFPNDPKPTEEEMVNSYVKTLAAVVGRHRIKNGFKEEARKEIYSVSTSTYTGFGALIREELSYKAILC

XP_023548315.1 multiple organellar RNA editing factor 3, mitochondrial [Cucurbita pepo subsp. pepo]9.1e-1880Show/hide
Query:  MEFPNDPKPTEEEMVNSYVKTLAAVVGRHRIKNGFKEEARKEIYSVSTSTYTGFGALIREELSYK
        MEFPNDPKP+EEEMVNSYVKTLAAVVG        +EEA+K+IYSVSTSTYTGFGALI EELSYK
Subjt:  MEFPNDPKPTEEEMVNSYVKTLAAVVGRHRIKNGFKEEARKEIYSVSTSTYTGFGALIREELSYK

TrEMBL top hitse value%identityAlignment
A0A2P2JPN1 Uncharacterized protein MANES_15G0102004.9e-1773.85Show/hide
Query:  MEFPNDPKPTEEEMVNSYVKTLAAVVGRHRIKNGFKEEARKEIYSVSTSTYTGFGALIREELSYK
        MEFPNDPKPTEEEM+NSYVKTLA++VG        +EEA+K+IYSV T+TYTGFGALI EELSYK
Subjt:  MEFPNDPKPTEEEMVNSYVKTLAAVVGRHRIKNGFKEEARKEIYSVSTSTYTGFGALIREELSYK

A0A6J1C9B1 multiple organellar RNA editing factor 3, mitochondrial-like2.9e-1775.38Show/hide
Query:  MEFPNDPKPTEEEMVNSYVKTLAAVVGRHRIKNGFKEEARKEIYSVSTSTYTGFGALIREELSYK
        +EFPNDPKP+EEEMVNSY+KTLAAVVG        +EEA+K+IYSVST+TYTGFGALI EELSYK
Subjt:  MEFPNDPKPTEEEMVNSYVKTLAAVVGRHRIKNGFKEEARKEIYSVSTSTYTGFGALIREELSYK

A0A6J1ER88 multiple organellar RNA editing factor 3, mitochondrial-like isoform X23.9e-3094.52Show/hide
Query:  MEFPNDPKPTEEEMVNSYVKTLAAVVGRHRIKNGFKEEARKEIYSVSTSTYTGFGALIREELSYKAILCVFVN
        MEFPN+ KPTEEEMVNSYVKTLAAVVGRHRIKNGF+EEARKEIYSVSTSTYTGFGALIREELSYKAILCVFV+
Subjt:  MEFPNDPKPTEEEMVNSYVKTLAAVVGRHRIKNGFKEEARKEIYSVSTSTYTGFGALIREELSYKAILCVFVN

A0A6J1H5X4 multiple organellar RNA editing factor 3, mitochondrial9.9e-1878.46Show/hide
Query:  MEFPNDPKPTEEEMVNSYVKTLAAVVGRHRIKNGFKEEARKEIYSVSTSTYTGFGALIREELSYK
        MEFPNDPKP+EEEMVNSYVKTLAAVVG        +EEA+K+IYSVST+TYTGFGALI EELSYK
Subjt:  MEFPNDPKPTEEEMVNSYVKTLAAVVGRHRIKNGFKEEARKEIYSVSTSTYTGFGALIREELSYK

A0A6J1L4U9 multiple organellar RNA editing factor 3, mitochondrial9.9e-1878.46Show/hide
Query:  MEFPNDPKPTEEEMVNSYVKTLAAVVGRHRIKNGFKEEARKEIYSVSTSTYTGFGALIREELSYK
        MEFPNDPKP+EEEMVNSYVKTLAAVVG        +EEA+K+IYSVST+TYTGFGALI EELSYK
Subjt:  MEFPNDPKPTEEEMVNSYVKTLAAVVGRHRIKNGFKEEARKEIYSVSTSTYTGFGALIREELSYK

SwissProt top hitse value%identityAlignment
O82169 Multiple organellar RNA editing factor 6, mitochondrial3.7e-0644.62Show/hide
Query:  MEFPNDPKPTEEEMVNSYVKTLAAVVGRHRIKNGFKEEARKEIYSVSTSTYTGFGALIREELSYK
        ME P      +++M++ YV+TLA +VG        +EEARK+IY+VS   Y GFG  I EE S K
Subjt:  MEFPNDPKPTEEEMVNSYVKTLAAVVGRHRIKNGFKEEARKEIYSVSTSTYTGFGALIREELSYK

Q38732 DAG protein, chloroplastic2.5e-1049.23Show/hide
Query:  MEFPNDPKPTEEEMVNSYVKTLAAVVGRHRIKNGFKEEARKEIYSVSTSTYTGFGALIREELSYK
        MEFP DP PT E+M+++Y+ TLA V+G         EEA+K +Y+ ST+TYTGF   + EE S K
Subjt:  MEFPNDPKPTEEEMVNSYVKTLAAVVGRHRIKNGFKEEARKEIYSVSTSTYTGFGALIREELSYK

Q84JZ6 Multiple organellar RNA editing factor 3, mitochondrial2.6e-1563.51Show/hide
Query:  MEFPNDPKPTEEEMVNSYVKTLAAVVGRHRIKNGFKEEARKEIYSVSTSTYTGFGALIREELSYKAILCVFVNW
        MEF  DPKPTEEEM+NSYVKTL +V+       G +EEA+K+IYSV TSTYTGFGALI EELS K      V W
Subjt:  MEFPNDPKPTEEEMVNSYVKTLAAVVGRHRIKNGFKEEARKEIYSVSTSTYTGFGALIREELSYKAILCVFVNW

Q9LKA5 Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial8.1e-0945.07Show/hide
Query:  PNDPKPTEEEMVNSYVKTLAAVVGRHRIKNGFKEEARKEIYSVSTSTYTGFGALIREELSYKAILCVFVNW
        P   +PT +E+++SY+KTLA +VG        ++EAR +IYSVST  Y  FGAL+ E+LS+K      V W
Subjt:  PNDPKPTEEEMVNSYVKTLAAVVGRHRIKNGFKEEARKEIYSVSTSTYTGFGALIREELSYKAILCVFVNW

Q9LPZ1 Multiple organellar RNA editing factor 9, chloroplastic1.6e-0947.69Show/hide
Query:  MEFPNDPKPTEEEMVNSYVKTLAAVVGRHRIKNGFKEEARKEIYSVSTSTYTGFGALIREELSYK
        MEFP DP P+ ++M+++Y+ TLA V+G         EEA+K +Y+ ST+TYTGF   I EE S K
Subjt:  MEFPNDPKPTEEEMVNSYVKTLAAVVGRHRIKNGFKEEARKEIYSVSTSTYTGFGALIREELSYK

Arabidopsis top hitse value%identityAlignment
AT1G11430.1 plastid developmental protein DAG, putative1.2e-1047.69Show/hide
Query:  MEFPNDPKPTEEEMVNSYVKTLAAVVGRHRIKNGFKEEARKEIYSVSTSTYTGFGALIREELSYK
        MEFP DP P+ ++M+++Y+ TLA V+G         EEA+K +Y+ ST+TYTGF   I EE S K
Subjt:  MEFPNDPKPTEEEMVNSYVKTLAAVVGRHRIKNGFKEEARKEIYSVSTSTYTGFGALIREELSYK

AT2G35240.1 plastid developmental protein DAG, putative2.7e-0744.62Show/hide
Query:  MEFPNDPKPTEEEMVNSYVKTLAAVVGRHRIKNGFKEEARKEIYSVSTSTYTGFGALIREELSYK
        ME P      +++M++ YV+TLA +VG        +EEARK+IY+VS   Y GFG  I EE S K
Subjt:  MEFPNDPKPTEEEMVNSYVKTLAAVVGRHRIKNGFKEEARKEIYSVSTSTYTGFGALIREELSYK

AT3G06790.1 plastid developmental protein DAG, putative8.2e-1763.51Show/hide
Query:  MEFPNDPKPTEEEMVNSYVKTLAAVVGRHRIKNGFKEEARKEIYSVSTSTYTGFGALIREELSYKAILCVFVNW
        MEF  DPKPTEEEM+NSYVKTL +V+       G++EEA+K+IYSV TSTYTGFGALI EELS K      V W
Subjt:  MEFPNDPKPTEEEMVNSYVKTLAAVVGRHRIKNGFKEEARKEIYSVSTSTYTGFGALIREELSYKAILCVFVNW

AT3G06790.2 plastid developmental protein DAG, putative1.8e-1663.51Show/hide
Query:  MEFPNDPKPTEEEMVNSYVKTLAAVVGRHRIKNGFKEEARKEIYSVSTSTYTGFGALIREELSYKAILCVFVNW
        MEF  DPKPTEEEM+NSYVKTL +V+       G +EEA+K+IYSV TSTYTGFGALI EELS K      V W
Subjt:  MEFPNDPKPTEEEMVNSYVKTLAAVVGRHRIKNGFKEEARKEIYSVSTSTYTGFGALIREELSYKAILCVFVNW

AT3G15000.1 cobalt ion binding5.7e-1045.07Show/hide
Query:  PNDPKPTEEEMVNSYVKTLAAVVGRHRIKNGFKEEARKEIYSVSTSTYTGFGALIREELSYKAILCVFVNW
        P   +PT +E+++SY+KTLA +VG        ++EAR +IYSVST  Y  FGAL+ E+LS+K      V W
Subjt:  PNDPKPTEEEMVNSYVKTLAAVVGRHRIKNGFKEEARKEIYSVSTSTYTGFGALIREELSYKAILCVFVNW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTTCCAAATGATCCGAAGCCAACGGAAGAGGAGATGGTGAATTCTTATGTCAAAACTCTTGCAGCAGTAGTCGGAAGGCATCGGATTAAAAACGGATTTAAGGA
AGAGGCGAGGAAGGAAATATACTCTGTCAGTACATCTACCTATACTGGCTTTGGTGCCTTGATTCGGGAAGAGCTTTCTTACAAGGCGATTTTGTGCGTATTCGTGAATT
GGCAGGCGTTCTATGGGTTTTACCTAATTCATATCTCGATGTTCCAAACACAGGTGATCTGTTTATTGTTGGAAAGGTCATCGCCAGAGACAACAAAGTGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGTTTCCAAATGATCCGAAGCCAACGGAAGAGGAGATGGTGAATTCTTATGTCAAAACTCTTGCAGCAGTAGTCGGAAGGCATCGGATTAAAAACGGATTTAAGGA
AGAGGCGAGGAAGGAAATATACTCTGTCAGTACATCTACCTATACTGGCTTTGGTGCCTTGATTCGGGAAGAGCTTTCTTACAAGGCGATTTTGTGCGTATTCGTGAATT
GGCAGGCGTTCTATGGGTTTTACCTAATTCATATCTCGATGTTCCAAACACAGGTGATCTGTTTATTGTTGGAAAGGTCATCGCCAGAGACAACAAAGTGGTAGAAATAG
GCCTCGTCCATGGTACGATAGATGTCGAGAAACTGTGCATATTGAACGGAGGCAACCAATATTGAGGATTGTTGAAATATCGTATACTTAAAGTACAAAGCTTGGGTCAA
GACCATAGAAACCCGAATGGTCAAAATTCAGATCGAAATGGAGTTGGAGATATCTGGGCAAATCTAGACAAGTTTAATTGAAACAATCACGGATTGATGGATGCTTTGAG
TATCTGTTGACTCCTTAATCCATGAAGTCTAGGCAGTCAGGTATGAGATTTCTATTAGTTCTTAATGCGCATTTAGATCAAGTATGGAACTCACATATCTAAATGCAAAT
ATCTTCGCCTGGAATAAAGTACACGACACCCAATTGCTCTTCTATGTTTCAATTTTATGTTTTTGTTCTTCTGCAGTAAAATAAAATTATTAAGAAAAGAAGAGAAAAAA
AGAGGGACGGATCAAAATTAGACACACATTCGTTCTTCTGACGATAGAACTGAATTAAATAATTGTGGAAAACAGTGAATTTTTTGTATTTATATTCGTATACTCCAAAA
AAGAAAATAATAAAATAAATAAAAAGGGTGTGTTTTTTTATACAACTCATCATTCATCTTCTTCCCTTAACAGTTTCAAGGATGATTATGTCATGAACTCATCAACTTGC
CACTGCCACAATTCTCTTCCTTCAACGTTTGGATAGAACCTTACGTGTTTGTGTATATATATATATATATATATATAATT
Protein sequenceShow/hide protein sequence
MEFPNDPKPTEEEMVNSYVKTLAAVVGRHRIKNGFKEEARKEIYSVSTSTYTGFGALIREELSYKAILCVFVNWQAFYGFYLIHISMFQTQVICLLLERSSPETTKW