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Carg18880 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18880
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description60S ribosomal protein L29
Genome locationCarg_Chr08:7683191..7683928
RNA-Seq ExpressionCarg18880
SyntenyCarg18880
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002673 - Ribosomal protein L29e


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013674.1 60S ribosomal protein L29-1, partial [Cucurbita argyrosperma subsp. argyrosperma]7.0e-2396.72Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE
        MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGE+G+EEE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE

XP_022930442.1 60S ribosomal protein L29-1-like [Cucurbita moschata]7.0e-2398.36Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE
        MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRN RYAKKHNNKSGESGTEEE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE

XP_022959482.1 60S ribosomal protein L29-1-like [Cucurbita moschata]7.0e-2396.72Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE
        MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGE+G+EEE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE

XP_023000056.1 60S ribosomal protein L29-1-like [Cucurbita maxima]1.1e-23100Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE
        MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE

XP_023514068.1 60S ribosomal protein L29-1-like [Cucurbita pepo subsp. pepo]3.2e-2398.36Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE
        MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK GESGTEEE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE

TrEMBL top hitse value%identityAlignment
A0A6J1EQI3 60S ribosomal protein L293.4e-2398.36Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE
        MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRN RYAKKHNNKSGESGTEEE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE

A0A6J1H4N3 60S ribosomal protein L293.4e-2396.72Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE
        MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGE+G+EEE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE

A0A6J1KET9 60S ribosomal protein L295.2e-24100Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE
        MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE

A0A6J1L1Y3 60S ribosomal protein L295.8e-2396.72Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE
        MAKSKNHTAHNQSRKAHRNGIKKPRKHR+TSTKGMDPKFLRNQRYAKKHNNKSGE+GTEEE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE

A0A6J1L4P4 60S ribosomal protein L293.4e-2396.72Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE
        MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGE+G+EEE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE

SwissProt top hitse value%identityAlignment
P47914 60S ribosomal protein L297.3e-1578.85Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK
        MAKSKNHT HNQSRK HRNGIKKPR  R+ S KG+DPKFLRN R+AKKHN K
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK

Q58DW3 60S ribosomal protein L297.3e-1578.85Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK
        MAKSKNHT HNQSRK HRNGIKKPR  R+ S KG+DPKFLRN R+AKKHN K
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK

Q84WM0 60S ribosomal protein L29-23.4e-2081.97Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE
        MAKSKNHTAHNQS KAH+NGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KSGE+   EE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE

Q8HXB8 60S ribosomal protein L297.3e-1578.85Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK
        MAKSKNHT HNQSRK HRNGIKKPR  R+ S KG+DPKFLRN R+AKKHN K
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK

Q9M7X7 60S ribosomal protein L29-12.6e-2080.33Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE
        MAKSKNHTAHNQS KAH+NGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GE+ + EE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE

Arabidopsis top hitse value%identityAlignment
AT3G06680.1 Ribosomal L29e protein family2.4e-2181.97Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE
        MAKSKNHTAHNQS KAH+NGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KSGE+   EE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE

AT3G06680.2 Ribosomal L29e protein family2.4e-2181.97Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE
        MAKSKNHTAHNQS KAH+NGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KSGE+   EE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE

AT3G06700.1 Ribosomal L29e protein family1.8e-2180.33Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE
        MAKSKNHTAHNQS KAH+NGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GE+ + EE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE

AT3G06700.2 Ribosomal L29e protein family1.8e-2180.33Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE
        MAKSKNHTAHNQS KAH+NGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GE+ + EE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE

AT3G06700.3 Ribosomal L29e protein family1.8e-2180.33Show/hide
Query:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE
        MAKSKNHTAHNQS KAH+NGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GE+ + EE
Subjt:  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAGTCGAAGAATCACACAGCGCACAATCAGTCCCGAAAAGCCCATAGGAATGGCATCAAGAAGCCAAGGAAGCACCGCCACACTTCCACCAAAGGGATGGATCC
CAAGTTTCTGAGGAATCAAAGGTACGCCAAGAAACACAACAACAAGAGTGGTGAAAGCGGTACTGAGGAAGAGTAA
mRNA sequenceShow/hide mRNA sequence
AAACCCTAGAATTTGCAGCCACCGCTGGGTCCGAGAAATGGCCAAGTCGAAGAATCACACAGCGCACAATCAGTCCCGAAAAGCCCATAGGAATGGCATCAAGAAGCCAA
GGAAGCACCGCCACACTTCCACCAAAGGGATGGATCCCAAGTTTCTGAGGAATCAAAGGTACGCCAAGAAACACAACAACAAGAGTGGTGAAAGCGGTACTGAGGAAGAG
TAATTTAGAACGCCGTTAATTTGAATTTCGAGTCTGCTTCGATTGAACATTTTTATGTCTCTGCCCTTTTTGTTCATTAGTATAGTTATTTTTACTTGAATTTAACGAGT
CCTGTTACGACTATCGATTAACCTGTTCTGGAAGTTCAATTTTTTAGTGATTGATTGTGTTTTCACACTCATTTCTGCATTCTCTCTTGTTTCTTCTTCTTCTGGTTTTA
ATGGATCCTAATGTTGTCAGTTCATTGCTGACACTTGTTTCTTTCAAATGCATTATGATTTCTTTTTTTGG
Protein sequenceShow/hide protein sequence
MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEEE