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Carg18892 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18892
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr08:7734969..7735283
RNA-Seq ExpressionCarg18892
SyntenyCarg18892
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575119.1 hypothetical protein SDJN03_25758, partial [Cucurbita argyrosperma subsp. sororia]5.0e-2160Show/hide
Query:  MMKRTLLLFAVFLLLVFTDATMHSVIKKKDARKLAQSFSGQ-IPKTGVFGGV--KYSEDADV-----AQADVGMNNNEDEDDENLGYKNYGKGSDTETHR
        MMK+ L+L  V LLLV  DA MH V++KK ARKLA+S  GQ  P+T VF GV     ED +V        ++  NNN D+DDENLGYKNYGKGSDTETHR
Subjt:  MMKRTLLLFAVFLLLVFTDATMHSVIKKKDARKLAQSFSGQ-IPKTGVFGGV--KYSEDADV-----AQADVGMNNNEDEDDENLGYKNYGKGSDTETHR

Query:  YFSSEKPYRP
        YFSS+KPY P
Subjt:  YFSSEKPYRP

KAG6594018.1 hypothetical protein SDJN03_13494, partial [Cucurbita argyrosperma subsp. sororia]6.3e-48100Show/hide
Query:  MTMMKRTLLLFAVFLLLVFTDATMHSVIKKKDARKLAQSFSGQIPKTGVFGGVKYSEDADVAQADVGMNNNEDEDDENLGYKNYGKGSDTETHRYFSSEK
        MTMMKRTLLLFAVFLLLVFTDATMHSVIKKKDARKLAQSFSGQIPKTGVFGGVKYSEDADVAQADVGMNNNEDEDDENLGYKNYGKGSDTETHRYFSSEK
Subjt:  MTMMKRTLLLFAVFLLLVFTDATMHSVIKKKDARKLAQSFSGQIPKTGVFGGVKYSEDADVAQADVGMNNNEDEDDENLGYKNYGKGSDTETHRYFSSEK

Query:  PYRP
        PYRP
Subjt:  PYRP

KAG7013689.1 hypothetical protein SDJN02_23856, partial [Cucurbita argyrosperma subsp. argyrosperma]5.0e-2160Show/hide
Query:  MMKRTLLLFAVFLLLVFTDATMHSVIKKKDARKLAQSFSGQ-IPKTGVFGGV--KYSEDADV-----AQADVGMNNNEDEDDENLGYKNYGKGSDTETHR
        MMK+ L+L  V LLLV  DA MH V++KK ARKLA+S  GQ  P+T VF GV     ED +V        ++  NNN D+DDENLGYKNYGKGSDTETHR
Subjt:  MMKRTLLLFAVFLLLVFTDATMHSVIKKKDARKLAQSFSGQ-IPKTGVFGGV--KYSEDADV-----AQADVGMNNNEDEDDENLGYKNYGKGSDTETHR

Query:  YFSSEKPYRP
        YFSS+KPY P
Subjt:  YFSSEKPYRP

TYK02960.1 uncharacterized protein E5676_scaffold46G00430 [Cucumis melo var. makuwa]7.3e-2061.47Show/hide
Query:  MMKRTLLLFAVFLLLVFTDATMHSVIKKKDARKLAQ-SFSGQIPKTGVFGGVKYSE--DADVAQADVGMNN----NEDEDDENLGYKNYGKGSDTETHRY
        MMKR LLLFAV LLL+  DA M +V++KK ARKLAQ S   +IPK  VF      E    DVA  DV  NN    + ++DD NLGYKNYGKGSDTETHRY
Subjt:  MMKRTLLLFAVFLLLVFTDATMHSVIKKKDARKLAQ-SFSGQIPKTGVFGGVKYSE--DADVAQADVGMNN----NEDEDDENLGYKNYGKGSDTETHRY

Query:  FSSEKPYRP
        FSS+KPYRP
Subjt:  FSSEKPYRP

XP_004150985.1 uncharacterized protein LOC101207042 [Cucumis sativus]3.3e-2061.26Show/hide
Query:  MTMMKRTLLLFAVFLLLVFTDATMHSVIKKKDARKLAQSFS-GQIPKTGVFGGVKYS--EDADVAQADVGMNNN----EDEDDENLGYKNYGKGSDTETH
        M MMKR LLLFA  LLL+  DA    +++KK ARKLAQ FS  + PK GVF     S  E+ DVA  DV  NNN     ++DD NLGYKNYGKGSDTETH
Subjt:  MTMMKRTLLLFAVFLLLVFTDATMHSVIKKKDARKLAQSFS-GQIPKTGVFGGVKYS--EDADVAQADVGMNNN----EDEDDENLGYKNYGKGSDTETH

Query:  RYFSSEKPYRP
        RYFSS+KPYRP
Subjt:  RYFSSEKPYRP

TrEMBL top hitse value%identityAlignment
A0A0A0KGD6 Uncharacterized protein1.6e-2061.26Show/hide
Query:  MTMMKRTLLLFAVFLLLVFTDATMHSVIKKKDARKLAQSFS-GQIPKTGVFGGVKYS--EDADVAQADVGMNNN----EDEDDENLGYKNYGKGSDTETH
        M MMKR LLLFA  LLL+  DA    +++KK ARKLAQ FS  + PK GVF     S  E+ DVA  DV  NNN     ++DD NLGYKNYGKGSDTETH
Subjt:  MTMMKRTLLLFAVFLLLVFTDATMHSVIKKKDARKLAQSFS-GQIPKTGVFGGVKYS--EDADVAQADVGMNNN----EDEDDENLGYKNYGKGSDTETH

Query:  RYFSSEKPYRP
        RYFSS+KPYRP
Subjt:  RYFSSEKPYRP

A0A5D3BV16 Uncharacterized protein3.5e-2061.47Show/hide
Query:  MMKRTLLLFAVFLLLVFTDATMHSVIKKKDARKLAQ-SFSGQIPKTGVFGGVKYSE--DADVAQADVGMNN----NEDEDDENLGYKNYGKGSDTETHRY
        MMKR LLLFAV LLL+  DA M +V++KK ARKLAQ S   +IPK  VF      E    DVA  DV  NN    + ++DD NLGYKNYGKGSDTETHRY
Subjt:  MMKRTLLLFAVFLLLVFTDATMHSVIKKKDARKLAQ-SFSGQIPKTGVFGGVKYSE--DADVAQADVGMNN----NEDEDDENLGYKNYGKGSDTETHRY

Query:  FSSEKPYRP
        FSS+KPYRP
Subjt:  FSSEKPYRP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTATGATGAAGAGGACCCTTCTTCTCTTTGCCGTCTTCTTGCTGCTCGTGTTTACAGATGCGACCATGCACAGCGTGATTAAGAAGAAAGATGCGCGTAAGCTAGC
TCAAAGCTTTAGTGGTCAAATCCCTAAAACGGGAGTGTTCGGTGGTGTGAAATATTCTGAAGATGCTGATGTTGCTCAAGCTGACGTTGGCATGAACAACAACGAAGATG
AGGACGATGAAAATCTTGGTTATAAAAACTATGGAAAGGGCTCGGATACCGAAACTCACCGTTACTTCTCAAGCGAGAAGCCATACAGACCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTATGATGAAGAGGACCCTTCTTCTCTTTGCCGTCTTCTTGCTGCTCGTGTTTACAGATGCGACCATGCACAGCGTGATTAAGAAGAAAGATGCGCGTAAGCTAGC
TCAAAGCTTTAGTGGTCAAATCCCTAAAACGGGAGTGTTCGGTGGTGTGAAATATTCTGAAGATGCTGATGTTGCTCAAGCTGACGTTGGCATGAACAACAACGAAGATG
AGGACGATGAAAATCTTGGTTATAAAAACTATGGAAAGGGCTCGGATACCGAAACTCACCGTTACTTCTCAAGCGAGAAGCCATACAGACCCTAA
Protein sequenceShow/hide protein sequence
MTMMKRTLLLFAVFLLLVFTDATMHSVIKKKDARKLAQSFSGQIPKTGVFGGVKYSEDADVAQADVGMNNNEDEDDENLGYKNYGKGSDTETHRYFSSEKPYRP