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Carg18902 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18902
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr08:7779121..7784422
RNA-Seq ExpressionCarg18902
SyntenyCarg18902
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACR36593.1 unknown [Zea mays]4.2e-0540.54Show/hide
Query:  LVLRGVNRLDFADDASLILENLAMVFGNIRQDSYNERVDGFDLSETLCQSNHTFPIVSITGQERHECPLGSIGR
        LVLR V+ LD ADDA+L  E+ A+  G++ Q  +++ V   DL++ L Q +H  P+V++  +ERH  P G + R
Subjt:  LVLRGVNRLDFADDASLILENLAMVFGNIRQDSYNERVDGFDLSETLCQSNHTFPIVSITGQERHECPLGSIGR
KAG6594027.1 hypothetical protein SDJN03_13503, partial [Cucurbita argyrosperma subsp. sororia]9.0e-2498.41Show/hide
Query:  MLLVDNGDGEIALSGTRNSYVLFSTQHTSPIDVVFSGHRCTTPKSSSAIHSAASTSSTLPAQL
        MLLVDNGDGEIALSGTRNSYVLFSTQHTSPIDVVFSGHRCTTPKSSSAIHSAASTSSTLPAQ+
Subjt:  MLLVDNGDGEIALSGTRNSYVLFSTQHTSPIDVVFSGHRCTTPKSSSAIHSAASTSSTLPAQL
KAG7026368.1 hypothetical protein SDJN02_12870, partial [Cucurbita argyrosperma subsp. argyrosperma]6.2e-142100Show/hide
Query:  MTPQHGHDEVVNGRNGFVNVVETKWLKFNLNYLLSKQGWSCGLASFEKILVGEEVGFIHKKSSVEVKRGWVSHFLHRPLDFVRALLAVTNLVLRGVNRLD
        MTPQHGHDEVVNGRNGFVNVVETKWLKFNLNYLLSKQGWSCGLASFEKILVGEEVGFIHKKSSVEVKRGWVSHFLHRPLDFVRALLAVTNLVLRGVNRLD
Subjt:  MTPQHGHDEVVNGRNGFVNVVETKWLKFNLNYLLSKQGWSCGLASFEKILVGEEVGFIHKKSSVEVKRGWVSHFLHRPLDFVRALLAVTNLVLRGVNRLD

Query:  FADDASLILENLAMVFGNIRQDSYNERVDGFDLSETLCQSNHTFPIVSITGQERHECPLGSIGRLDGSFGGSRRHIDYEECEKGDDRLLMLLVDNGDGEI
        FADDASLILENLAMVFGNIRQDSYNERVDGFDLSETLCQSNHTFPIVSITGQERHECPLGSIGRLDGSFGGSRRHIDYEECEKGDDRLLMLLVDNGDGEI
Subjt:  FADDASLILENLAMVFGNIRQDSYNERVDGFDLSETLCQSNHTFPIVSITGQERHECPLGSIGRLDGSFGGSRRHIDYEECEKGDDRLLMLLVDNGDGEI

Query:  ALSGTRNSYVLFSTQHTSPIDVVFSGHRCTTPKSSSAIHSAASTSSTLPAQL
        ALSGTRNSYVLFSTQHTSPIDVVFSGHRCTTPKSSSAIHSAASTSSTLPAQL
Subjt:  ALSGTRNSYVLFSTQHTSPIDVVFSGHRCTTPKSSSAIHSAASTSSTLPAQL
TrEMBL top hitse value%identityAlignment
A0A5J5B399 Uncharacterized protein5.0e-0442.11Show/hide
Query:  VETKWLKFNLNYLLSKQGWSCGLASFEKILVGEEVGFIHKKSSVEVKRGWVSHFLHRPLDFVRALLAVTNLVLRGV
        +E  W    +NYLLSK+G    L   +++++G E G + K +S+EV+R      L  PLD + ALLAV NLVL  V
Subjt:  VETKWLKFNLNYLLSKQGWSCGLASFEKILVGEEVGFIHKKSSVEVKRGWVSHFLHRPLDFVRALLAVTNLVLRGV
C4J5Z3 Uncharacterized protein2.0e-0540.54Show/hide
Query:  LVLRGVNRLDFADDASLILENLAMVFGNIRQDSYNERVDGFDLSETLCQSNHTFPIVSITGQERHECPLGSIGR
        LVLR V+ LD ADDA+L  E+ A+  G++ Q  +++ V   DL++ L Q +H  P+V++  +ERH  P G + R
Subjt:  LVLRGVNRLDFADDASLILENLAMVFGNIRQDSYNERVDGFDLSETLCQSNHTFPIVSITGQERHECPLGSIGR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGCCACAACATGGCCATGACGAGGTTGTAAATGGGAGGAATGGGTTTGTAAATGTCGTTGAAACTAAATGGTTGAAGTTCAACTTAAATTACCTGCTCAGCAAACA
AGGTTGGAGTTGTGGCCTTGCAAGTTTCGAGAAGATCCTTGTAGGTGAAGAGGTCGGGTTCATACACAAAAAATCCAGCGTTGAAGTAAAGAGGGGGTGGGTTTCCCATT
TCCTCCACAGGCCACTTGACTTTGTCAGGGCATTGCTGGCAGTAACCAATCTTGTACTGCGGGGGGTAAACAGGCTCGATTTCGCGGACGATGCATCCCTGATACTCGAG
AATCTGGCGATGGTCTTCGGGAACATCAGGCAGGACAGCTACAATGAGAGGGTAGACGGTTTTGACCTTTCTGAGACCCTTTGCCAATCCAACCACACCTTTCCAATAGT
CTCCATTACCGGCCAAGAACGTCACGAATGCCCTCTTGGGAGCATCGGTCGACTCGATGGCAGTTTCGGTGGCAGCCGGAGACATATTGATTATGAGGAATGTGAGAAGG
GTGATGATAGACTGCTGATGCTTCTGGTTGATAATGGGGATGGCGAGATAGCTTTAAGCGGCACACGGAATTCTTACGTCCTCTTTTCAACGCAGCACACTTCCCCTATC
GACGTAGTCTTCTCCGGTCACCGCTGCACAACCCCCAAATCTTCTTCCGCCATTCACTCCGCCGCTTCAACTTCCTCCACATTACCAGCACAGCTATAA
mRNA sequenceShow/hide mRNA sequence
ATGACGCCACAACATGGCCATGACGAGGTTGTAAATGGGAGGAATGGGTTTGTAAATGTCGTTGAAACTAAATGGTTGAAGTTCAACTTAAATTACCTGCTCAGCAAACA
AGGTTGGAGTTGTGGCCTTGCAAGTTTCGAGAAGATCCTTGTAGGTGAAGAGGTCGGGTTCATACACAAAAAATCCAGCGTTGAAGTAAAGAGGGGGTGGGTTTCCCATT
TCCTCCACAGGCCACTTGACTTTGTCAGGGCATTGCTGGCAGTAACCAATCTTGTACTGCGGGGGGTAAACAGGCTCGATTTCGCGGACGATGCATCCCTGATACTCGAG
AATCTGGCGATGGTCTTCGGGAACATCAGGCAGGACAGCTACAATGAGAGGGTAGACGGTTTTGACCTTTCTGAGACCCTTTGCCAATCCAACCACACCTTTCCAATAGT
CTCCATTACCGGCCAAGAACGTCACGAATGCCCTCTTGGGAGCATCGGTCGACTCGATGGCAGTTTCGGTGGCAGCCGGAGACATATTGATTATGAGGAATGTGAGAAGG
GTGATGATAGACTGCTGATGCTTCTGGTTGATAATGGGGATGGCGAGATAGCTTTAAGCGGCACACGGAATTCTTACGTCCTCTTTTCAACGCAGCACACTTCCCCTATC
GACGTAGTCTTCTCCGGTCACCGCTGCACAACCCCCAAATCTTCTTCCGCCATTCACTCCGCCGCTTCAACTTCCTCCACATTACCAGCACAGCTATAA
Protein sequenceShow/hide protein sequence
MTPQHGHDEVVNGRNGFVNVVETKWLKFNLNYLLSKQGWSCGLASFEKILVGEEVGFIHKKSSVEVKRGWVSHFLHRPLDFVRALLAVTNLVLRGVNRLDFADDASLILE
NLAMVFGNIRQDSYNERVDGFDLSETLCQSNHTFPIVSITGQERHECPLGSIGRLDGSFGGSRRHIDYEECEKGDDRLLMLLVDNGDGEIALSGTRNSYVLFSTQHTSPI
DVVFSGHRCTTPKSSSAIHSAASTSSTLPAQL