; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg18936 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18936
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionATP synthase subunit epsilon, mitochondrial
Genome locationCarg_Chr17:5713183..5715621
RNA-Seq ExpressionCarg18936
SyntenyCarg18936
Gene Ontology termsGO:0042776 - mitochondrial ATP synthesis coupled proton transport (biological process)
GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function)
InterPro domainsIPR006721 - ATP synthase, F1 complex, epsilon subunit, mitochondrial
IPR036742 - ATP synthase, F1 complex, epsilon subunit superfamily, mitochondrial


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7136509.1 hypothetical protein RHSIM_Rhsim08G0247900 [Rhododendron simsii]1.7e-2675.32Show/hide
Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPLKTEVLSREKVHFSISKWADGKPQKPISMRVELDGDVCNFKV
        MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEP K+E L+REKVHFS++KWADGKPQKP+S+ + L  ++   +V
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPLKTEVLSREKVHFSISKWADGKPQKPISMRVELDGDVCNFKV

KAG7013942.1 ATP synthase subunit epsilon, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-47100Show/hide
Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPLKTEVLSREKVHFSISKWADGKPQKPISMRVELDGDVCNFKVNTASLKFEISDRSSSFEKKV
        MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPLKTEVLSREKVHFSISKWADGKPQKPISMRVELDGDVCNFKVNTASLKFEISDRSSSFEKKV
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPLKTEVLSREKVHFSISKWADGKPQKPISMRVELDGDVCNFKVNTASLKFEISDRSSSFEKKV

XP_022954407.1 ATP synthase subunit epsilon, mitochondrial [Cucurbita moschata]2.0e-27100Show/hide
Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPLKTEVLSREKVHFSISKWADGKPQKPI
        MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPLKTEVLSREKVHFSISKWADGKPQKPI
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPLKTEVLSREKVHFSISKWADGKPQKPI

XP_022964126.1 ATP synthase subunit epsilon, mitochondrial-like [Cucurbita moschata]1.7e-2696.77Show/hide
Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPLKTEVLSREKVHFSISKWADGKPQKPI
        MASNAAVPFWRAAGMTYITYSNICANLVRNCLK+P KTEVLSREKVHFSISKWADGKPQKPI
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPLKTEVLSREKVHFSISKWADGKPQKPI

XP_023000286.1 ATP synthase subunit epsilon, mitochondrial-like [Cucurbita maxima]1.7e-2696.77Show/hide
Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPLKTEVLSREKVHFSISKWADGKPQKPI
        MASNAAVPFWRAAGMTYITYSNICANLVRNCLK+P KTEVLSREKVHFSISKWADGKPQKPI
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPLKTEVLSREKVHFSISKWADGKPQKPI

TrEMBL top hitse value%identityAlignment
A0A6J1CZN8 ATP synthase subunit epsilon, mitochondrial4.0e-2696.72Show/hide
Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPLKTEVLSREKVHFSISKWADGKPQKP
        MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEP K EVLSREKVHFSISKWADGKPQKP
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPLKTEVLSREKVHFSISKWADGKPQKP

A0A6J1GQX0 ATP synthase subunit epsilon, mitochondrial9.5e-28100Show/hide
Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPLKTEVLSREKVHFSISKWADGKPQKPI
        MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPLKTEVLSREKVHFSISKWADGKPQKPI
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPLKTEVLSREKVHFSISKWADGKPQKPI

A0A6J1HI26 ATP synthase subunit epsilon, mitochondrial-like8.1e-2796.77Show/hide
Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPLKTEVLSREKVHFSISKWADGKPQKPI
        MASNAAVPFWRAAGMTYITYSNICANLVRNCLK+P KTEVLSREKVHFSISKWADGKPQKPI
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPLKTEVLSREKVHFSISKWADGKPQKPI

A0A6J1JZ99 ATP synthase subunit epsilon, mitochondrial9.5e-28100Show/hide
Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPLKTEVLSREKVHFSISKWADGKPQKPI
        MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPLKTEVLSREKVHFSISKWADGKPQKPI
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPLKTEVLSREKVHFSISKWADGKPQKPI

A0A6J1KFG7 ATP synthase subunit epsilon, mitochondrial-like8.1e-2796.77Show/hide
Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPLKTEVLSREKVHFSISKWADGKPQKPI
        MASNAAVPFWRAAGMTYITYSNICANLVRNCLK+P KTEVLSREKVHFSISKWADGKPQKPI
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPLKTEVLSREKVHFSISKWADGKPQKPI

SwissProt top hitse value%identityAlignment
Q06450 ATP synthase subunit epsilon, mitochondrial1.7e-2686.89Show/hide
Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPLKTEVLSREKVHFSISKWADGKPQKP
        MASNAAVPFWRAAGMTYITYSN+CAN+VRNCLKEP + E LSREKVHFS SKW DGKPQKP
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPLKTEVLSREKVHFSISKWADGKPQKP

Q41898 ATP synthase subunit epsilon, mitochondrial3.1e-2376.47Show/hide
Query:  ASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPLKTEVLSREKVHFSISKWADGKPQKPISMRVELD
        A+ AAVPFWRAAGMTYI YSNICA LVRNCLKEP K+E  SREKVHFSISKW DGK +KP ++R E D
Subjt:  ASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPLKTEVLSREKVHFSISKWADGKPQKPISMRVELD

Q75JK6 ATP synthase subunit epsilon, mitochondrial4.7e-0843.33Show/hide
Query:  FWRAAGMTYITYSNICANLVRNCLKEPLKTEVLSREKVHFSISKWADGKPQKPISMRVEL
        +WRAAG+TY+ Y+NIC   VRNCLKEP +    +RE    +   + +GK    I +  EL
Subjt:  FWRAAGMTYITYSNICANLVRNCLKEPLKTEVLSREKVHFSISKWADGKPQKPISMRVEL

Q96253 ATP synthase subunit epsilon, mitochondrial4.6e-2787.1Show/hide
Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPLKTEVLSREKVHFSISKWADGKPQKPI
        MASNAAVPFWRAAGMTYI+YSNICAN+VRNCLKEP K E L+REKVHFS+SKWADGKPQKP+
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPLKTEVLSREKVHFSISKWADGKPQKPI

Q9VXN2 Protein stunted8.1e-0848.98Show/hide
Query:  WRAAGMTYITYSNICANLVRNCLKEPLKTEVLSREKVHFSISKWADGKP
        WRAAG+TYI YSNI A ++R  LK  L+ +   R+  H   + WA+GKP
Subjt:  WRAAGMTYITYSNICANLVRNCLKEPLKTEVLSREKVHFSISKWADGKP

Arabidopsis top hitse value%identityAlignment
AT1G51650.1 ATP synthase epsilon chain, mitochondrial3.2e-2887.1Show/hide
Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPLKTEVLSREKVHFSISKWADGKPQKPI
        MASNAAVPFWRAAGMTYI+YSNICAN+VRNCLKEP K E L+REKVHFS+SKWADGKPQKP+
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPLKTEVLSREKVHFSISKWADGKPQKPI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCAAATGCAGCGGTGCCCTTTTGGAGAGCGGCGGGGATGACATACATCACATACTCAAATATTTGCGCTAATCTGGTCAGGAACTGTCTCAAGGAGCCTTTGAA
GACCGAAGTTCTCAGCCGCGAGAAGGTTCACTTTTCCATTTCCAAGTGGGCGGACGGCAAGCCCCAAAAGCCCATTTCTATGCGCGTTGAACTCGATGGTGACGTTTGCA
ACTTCAAAGTGAACACTGCATCGCTCAAATTTGAGATTTCCGATCGATCTTCGTCTTTTGAGAAGAAAGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCAAATGCAGCGGTGCCCTTTTGGAGAGCGGCGGGGATGACATACATCACATACTCAAATATTTGCGCTAATCTGGTCAGGAACTGTCTCAAGGAGCCTTTGAA
GACCGAAGTTCTCAGCCGCGAGAAGGTTCACTTTTCCATTTCCAAGTGGGCGGACGGCAAGCCCCAAAAGCCCATTTCTATGCGCGTTGAACTCGATGGTGACGTTTGCA
ACTTCAAAGTGAACACTGCATCGCTCAAATTTGAGATTTCCGATCGATCTTCGTCTTTTGAGAAGAAAGTGTAA
Protein sequenceShow/hide protein sequence
MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPLKTEVLSREKVHFSISKWADGKPQKPISMRVELDGDVCNFKVNTASLKFEISDRSSSFEKKV