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Carg18948 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18948
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr17:5790415..5790953
RNA-Seq ExpressionCarg18948
SyntenyCarg18948
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013954.1 hypothetical protein SDJN02_24123, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-48100Show/hide
Query:  MALTCCCCSSSSFNVSLLKSGLSVSAKPISRIWMLKPTKFPLKKSLPLQIRSSIKNKVFEDQSEGVICYTDENGEIVCEGYDEGPRFHPNLPEKGNHQR
        MALTCCCCSSSSFNVSLLKSGLSVSAKPISRIWMLKPTKFPLKKSLPLQIRSSIKNKVFEDQSEGVICYTDENGEIVCEGYDEGPRFHPNLPEKGNHQR
Subjt:  MALTCCCCSSSSFNVSLLKSGLSVSAKPISRIWMLKPTKFPLKKSLPLQIRSSIKNKVFEDQSEGVICYTDENGEIVCEGYDEGPRFHPNLPEKGNHQR
XP_022953822.1 uncharacterized protein LOC111456239 isoform X1 [Cucurbita moschata]4.6e-4898.99Show/hide
Query:  MALTCCCCSSSSFNVSLLKSGLSVSAKPISRIWMLKPTKFPLKKSLPLQIRSSIKNKVFEDQSEGVICYTDENGEIVCEGYDEGPRFHPNLPEKGNHQR
        MALTCCCC SSSFNVSLLKSGLSVSAKPISRIWMLKPTKFPLKKSLPLQIRSSIKNKVFEDQSEGVICYTDENGEIVCEGYDEGPRFHPNLPEKGNHQR
Subjt:  MALTCCCCSSSSFNVSLLKSGLSVSAKPISRIWMLKPTKFPLKKSLPLQIRSSIKNKVFEDQSEGVICYTDENGEIVCEGYDEGPRFHPNLPEKGNHQR
XP_022953823.1 uncharacterized protein LOC111456239 isoform X2 [Cucurbita moschata]4.6e-4898.99Show/hide
Query:  MALTCCCCSSSSFNVSLLKSGLSVSAKPISRIWMLKPTKFPLKKSLPLQIRSSIKNKVFEDQSEGVICYTDENGEIVCEGYDEGPRFHPNLPEKGNHQR
        MALTCCCC SSSFNVSLLKSGLSVSAKPISRIWMLKPTKFPLKKSLPLQIRSSIKNKVFEDQSEGVICYTDENGEIVCEGYDEGPRFHPNLPEKGNHQR
Subjt:  MALTCCCCSSSSFNVSLLKSGLSVSAKPISRIWMLKPTKFPLKKSLPLQIRSSIKNKVFEDQSEGVICYTDENGEIVCEGYDEGPRFHPNLPEKGNHQR
XP_023548903.1 uncharacterized protein LOC111807416 isoform X1 [Cucurbita pepo subsp. pepo]4.6e-4898.99Show/hide
Query:  MALTCCCCSSSSFNVSLLKSGLSVSAKPISRIWMLKPTKFPLKKSLPLQIRSSIKNKVFEDQSEGVICYTDENGEIVCEGYDEGPRFHPNLPEKGNHQR
        MALTCCCCSSSSFNVSLLKSGLSVSAKPISRIWMLKP KFPLKKSLPLQIRSSIKNKVFEDQSEGVICYTDENGEIVCEGYDEGPRFHPNLPEKGNHQR
Subjt:  MALTCCCCSSSSFNVSLLKSGLSVSAKPISRIWMLKPTKFPLKKSLPLQIRSSIKNKVFEDQSEGVICYTDENGEIVCEGYDEGPRFHPNLPEKGNHQR
XP_023548904.1 uncharacterized protein LOC111807416 isoform X2 [Cucurbita pepo subsp. pepo]4.6e-4898.99Show/hide
Query:  MALTCCCCSSSSFNVSLLKSGLSVSAKPISRIWMLKPTKFPLKKSLPLQIRSSIKNKVFEDQSEGVICYTDENGEIVCEGYDEGPRFHPNLPEKGNHQR
        MALTCCCCSSSSFNVSLLKSGLSVSAKPISRIWMLKP KFPLKKSLPLQIRSSIKNKVFEDQSEGVICYTDENGEIVCEGYDEGPRFHPNLPEKGNHQR
Subjt:  MALTCCCCSSSSFNVSLLKSGLSVSAKPISRIWMLKPTKFPLKKSLPLQIRSSIKNKVFEDQSEGVICYTDENGEIVCEGYDEGPRFHPNLPEKGNHQR
TrEMBL top hitse value%identityAlignment
A0A1S3CGF5 uncharacterized protein LOC1035006444.8e-3580Show/hide
Query:  MALTCCCCSSSS-FNVSLLKSGLSVSAKPISRIWMLKPTKFPLKKSLPLQIRSSIKNKVFEDQSEGVICYTDENGEIVCEGYDEGPRFHPNLPEKGNHQR
        MALT    SSSS  N S LK+GLSVS KP++RIWMLKPT+FPLK SLPL+IRSSIKNKVFEDQSEGVICY DENGEI+CEGYDEGPRFH N+ EKGNHQR
Subjt:  MALTCCCCSSSS-FNVSLLKSGLSVSAKPISRIWMLKPTKFPLKKSLPLQIRSSIKNKVFEDQSEGVICYTDENGEIVCEGYDEGPRFHPNLPEKGNHQR
A0A6J1GPC1 uncharacterized protein LOC111456239 isoform X12.2e-4898.99Show/hide
Query:  MALTCCCCSSSSFNVSLLKSGLSVSAKPISRIWMLKPTKFPLKKSLPLQIRSSIKNKVFEDQSEGVICYTDENGEIVCEGYDEGPRFHPNLPEKGNHQR
        MALTCCCC SSSFNVSLLKSGLSVSAKPISRIWMLKPTKFPLKKSLPLQIRSSIKNKVFEDQSEGVICYTDENGEIVCEGYDEGPRFHPNLPEKGNHQR
Subjt:  MALTCCCCSSSSFNVSLLKSGLSVSAKPISRIWMLKPTKFPLKKSLPLQIRSSIKNKVFEDQSEGVICYTDENGEIVCEGYDEGPRFHPNLPEKGNHQR
A0A6J1GPD7 uncharacterized protein LOC111456239 isoform X22.2e-4898.99Show/hide
Query:  MALTCCCCSSSSFNVSLLKSGLSVSAKPISRIWMLKPTKFPLKKSLPLQIRSSIKNKVFEDQSEGVICYTDENGEIVCEGYDEGPRFHPNLPEKGNHQR
        MALTCCCC SSSFNVSLLKSGLSVSAKPISRIWMLKPTKFPLKKSLPLQIRSSIKNKVFEDQSEGVICYTDENGEIVCEGYDEGPRFHPNLPEKGNHQR
Subjt:  MALTCCCCSSSSFNVSLLKSGLSVSAKPISRIWMLKPTKFPLKKSLPLQIRSSIKNKVFEDQSEGVICYTDENGEIVCEGYDEGPRFHPNLPEKGNHQR
A0A6J1JXJ2 uncharacterized protein LOC111488739 isoform X22.5e-4495.96Show/hide
Query:  MALTCCCCSSSSFNVSLLKSGLSVSAKPISRIWMLKPTKFPLKKSLPLQIRSSIKNKVFEDQSEGVICYTDENGEIVCEGYDEGPRFHPNLPEKGNHQR
        MALTCC   SSSFNVSLLKSGLSVSAKPISRIWMLKPTKFPLKKSLPLQIRSSIKNKVFEDQSEGVICYTDENGEIVCEGYDEGPRF PNLPEKGNHQR
Subjt:  MALTCCCCSSSSFNVSLLKSGLSVSAKPISRIWMLKPTKFPLKKSLPLQIRSSIKNKVFEDQSEGVICYTDENGEIVCEGYDEGPRFHPNLPEKGNHQR
A0A6J1JZ71 uncharacterized protein LOC111488739 isoform X12.5e-4495.96Show/hide
Query:  MALTCCCCSSSSFNVSLLKSGLSVSAKPISRIWMLKPTKFPLKKSLPLQIRSSIKNKVFEDQSEGVICYTDENGEIVCEGYDEGPRFHPNLPEKGNHQR
        MALTCC   SSSFNVSLLKSGLSVSAKPISRIWMLKPTKFPLKKSLPLQIRSSIKNKVFEDQSEGVICYTDENGEIVCEGYDEGPRF PNLPEKGNHQR
Subjt:  MALTCCCCSSSSFNVSLLKSGLSVSAKPISRIWMLKPTKFPLKKSLPLQIRSSIKNKVFEDQSEGVICYTDENGEIVCEGYDEGPRFHPNLPEKGNHQR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G14280.1 unknown protein1.9e-1256.36Show/hide
Query:  SLPLQIRSSIKNKVFEDQSEGVICYTDENGEIVCEGYDEGPRFHPNLPEKGNHQR
        S P  IR S KN VFED  +G+ICYTD+NGE++CEGYDEGPR     P   ++ R
Subjt:  SLPLQIRSSIKNKVFEDQSEGVICYTDENGEIVCEGYDEGPRFHPNLPEKGNHQR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACTAACTTGTTGTTGTTGTTCTTCTTCTTCTTTCAATGTTTCTCTTCTCAAATCTGGTCTTTCAGTTTCAGCTAAGCCTATTAGCAGAATTTGGATGCTCAAACC
TACAAAGTTTCCACTCAAGAAGTCACTCCCATTGCAGATCAGATCTTCCATTAAGAACAAGGTTTTCGAGGATCAATCGGAGGGAGTGATTTGCTACACAGACGAGAATG
GGGAGATCGTCTGCGAAGGATACGATGAGGGCCCTCGCTTTCACCCAAACCTACCTGAAAAAGGCAACCATCAAAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCACTAACTTGTTGTTGTTGTTCTTCTTCTTCTTTCAATGTTTCTCTTCTCAAATCTGGTCTTTCAGTTTCAGCTAAGCCTATTAGCAGAATTTGGATGCTCAAACC
TACAAAGTTTCCACTCAAGAAGTCACTCCCATTGCAGATCAGATCTTCCATTAAGAACAAGGTTTTCGAGGATCAATCGGAGGGAGTGATTTGCTACACAGACGAGAATG
GGGAGATCGTCTGCGAAGGATACGATGAGGGCCCTCGCTTTCACCCAAACCTACCTGAAAAAGGCAACCATCAAAGGTAA
Protein sequenceShow/hide protein sequence
MALTCCCCSSSSFNVSLLKSGLSVSAKPISRIWMLKPTKFPLKKSLPLQIRSSIKNKVFEDQSEGVICYTDENGEIVCEGYDEGPRFHPNLPEKGNHQR