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Carg18950 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg18950
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionFLZ-type domain-containing protein
Genome locationCarg_Chr17:5811700..5812544
RNA-Seq ExpressionCarg18950
SyntenyCarg18950
Gene Ontology termsNA
InterPro domainsIPR007650 - Zf-FLZ domain
IPR044181 - FCS-Like Zinc finger 17/18


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013956.1 Protein MARD1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-70100Show/hide
Query:  MNHRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSSNNPSFLKSCVLCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVE
        MNHRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSSNNPSFLKSCVLCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVE
Subjt:  MNHRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSSNNPSFLKSCVLCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVE

Query:  AYRQCQRNEGSETRRLLEDLRRPHHRLPYLRRPVVS
        AYRQCQRNEGSETRRLLEDLRRPHHRLPYLRRPVVS
Subjt:  AYRQCQRNEGSETRRLLEDLRRPHHRLPYLRRPVVS

XP_008462244.1 PREDICTED: uncharacterized protein LOC103500647 [Cucumis melo]4.5e-4676.81Show/hide
Query:  NHRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSS-NNPSFLKSCVLCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVE
        N  + + LK VGLGILVHRSPEPNLVVKQSRKL  SL SSS NNPSFLK+C LCNKNLDP EDIYMYRGDQGYCS+KCRNQQI++D+K+ELEASTRKMV 
Subjt:  NHRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSS-NNPSFLKSCVLCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVE

Query:  AYRQCQRNE-GSETRRLLEDLRRPHHRLPYLR-RPVVS
        AYRQC +NE  +ETR LLEDLR+ H+RLP+ R RPVVS
Subjt:  AYRQCQRNE-GSETRRLLEDLRRPHHRLPYLR-RPVVS

XP_022953803.1 uncharacterized protein LOC111456219 [Cucurbita moschata]3.4e-7099.26Show/hide
Query:  MNHRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSSNNPSFLKSCVLCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVE
        MNHRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSSNNPSFLKSC+LCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVE
Subjt:  MNHRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSSNNPSFLKSCVLCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVE

Query:  AYRQCQRNEGSETRRLLEDLRRPHHRLPYLRRPVVS
        AYRQCQRNEGSETRRLLEDLRRPHHRLPYLRRPVVS
Subjt:  AYRQCQRNEGSETRRLLEDLRRPHHRLPYLRRPVVS

XP_022992436.1 protein MARD1-like [Cucurbita maxima]9.4e-6897.06Show/hide
Query:  MNHRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSSNNPSFLKSCVLCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVE
        M  RNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTS SNNPSFLKSCVLCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVE
Subjt:  MNHRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSSNNPSFLKSCVLCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVE

Query:  AYRQCQRNEGSETRRLLEDLRRPHHRLPYLRRPVVS
        AYRQCQRNEGSETRRLLEDLRRPHHRLP+LRRPVVS
Subjt:  AYRQCQRNEGSETRRLLEDLRRPHHRLPYLRRPVVS

XP_023548878.1 uncharacterized protein LOC111807399 [Cucurbita pepo subsp. pepo]1.7e-6998.53Show/hide
Query:  MNHRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSSNNPSFLKSCVLCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVE
        M HRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSSNNPSFLKSCVLCNKNLDPH+DIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVE
Subjt:  MNHRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSSNNPSFLKSCVLCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVE

Query:  AYRQCQRNEGSETRRLLEDLRRPHHRLPYLRRPVVS
        AYRQCQRNEGSETRRLLEDLRRPHHRLPYLRRPVVS
Subjt:  AYRQCQRNEGSETRRLLEDLRRPHHRLPYLRRPVVS

TrEMBL top hitse value%identityAlignment
A0A0A0K9B4 FLZ-type domain-containing protein1.9e-4578.63Show/hide
Query:  LKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSS-NNPSFLKSCVLCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVEAYRQCQR
        LK +GLGILVHRSPEPNLVVKQSRKL  SL SSS NNPSFLK+C LCNKNLDP EDIYMYRGDQGYCS+KCRNQQI++D+K+ELEASTRKMV AYR+C +
Subjt:  LKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSS-NNPSFLKSCVLCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVEAYRQCQR

Query:  NE-GSETRRLLEDLRRPHHRLPYLR-RPVVS
        NE  +ETR LLEDLR+ H+RLP+ R RPVVS
Subjt:  NE-GSETRRLLEDLRRPHHRLPYLR-RPVVS

A0A1S3CGJ4 uncharacterized protein LOC1035006472.2e-4676.81Show/hide
Query:  NHRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSS-NNPSFLKSCVLCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVE
        N  + + LK VGLGILVHRSPEPNLVVKQSRKL  SL SSS NNPSFLK+C LCNKNLDP EDIYMYRGDQGYCS+KCRNQQI++D+K+ELEASTRKMV 
Subjt:  NHRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSS-NNPSFLKSCVLCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVE

Query:  AYRQCQRNE-GSETRRLLEDLRRPHHRLPYLR-RPVVS
        AYRQC +NE  +ETR LLEDLR+ H+RLP+ R RPVVS
Subjt:  AYRQCQRNE-GSETRRLLEDLRRPHHRLPYLR-RPVVS

A0A5D3C0J4 DUF581 family protein2.2e-4676.81Show/hide
Query:  NHRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSS-NNPSFLKSCVLCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVE
        N  + + LK VGLGILVHRSPEPNLVVKQSRKL  SL SSS NNPSFLK+C LCNKNLDP EDIYMYRGDQGYCS+KCRNQQI++D+K+ELEASTRKMV 
Subjt:  NHRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSS-NNPSFLKSCVLCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVE

Query:  AYRQCQRNE-GSETRRLLEDLRRPHHRLPYLR-RPVVS
        AYRQC +NE  +ETR LLEDLR+ H+RLP+ R RPVVS
Subjt:  AYRQCQRNE-GSETRRLLEDLRRPHHRLPYLR-RPVVS

A0A6J1GPB9 uncharacterized protein LOC1114562191.7e-7099.26Show/hide
Query:  MNHRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSSNNPSFLKSCVLCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVE
        MNHRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSSNNPSFLKSC+LCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVE
Subjt:  MNHRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSSNNPSFLKSCVLCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVE

Query:  AYRQCQRNEGSETRRLLEDLRRPHHRLPYLRRPVVS
        AYRQCQRNEGSETRRLLEDLRRPHHRLPYLRRPVVS
Subjt:  AYRQCQRNEGSETRRLLEDLRRPHHRLPYLRRPVVS

A0A6J1JTJ9 protein MARD1-like4.5e-6897.06Show/hide
Query:  MNHRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSSNNPSFLKSCVLCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVE
        M  RNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTS SNNPSFLKSCVLCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVE
Subjt:  MNHRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSSNNPSFLKSCVLCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVE

Query:  AYRQCQRNEGSETRRLLEDLRRPHHRLPYLRRPVVS
        AYRQCQRNEGSETRRLLEDLRRPHHRLP+LRRPVVS
Subjt:  AYRQCQRNEGSETRRLLEDLRRPHHRLPYLRRPVVS

SwissProt top hitse value%identityAlignment
P0DO11 FCS-Like Zinc finger 172.2e-1945.83Show/hide
Query:  AVGLGILVHRSPEP--NLVVKQSRKLVFSLTSSSNNPS-----FLKSCVLCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVEAYR
        +VGL ++   S E   N+V+K S +L      + +NP+     FLK+C LCNK L   +D+YMYRGD G+CS +CR  Q+ +D++KELEAST+ M+ +YR
Subjt:  AVGLGILVHRSPEP--NLVVKQSRKLVFSLTSSSNNPS-----FLKSCVLCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVEAYR

Query:  QCQRNEG-SETRRLLEDLRR
        +C    G SE+R L +DLRR
Subjt:  QCQRNEG-SETRRLLEDLRR

P0DO12 FCS-Like Zinc finger 182.2e-1945.83Show/hide
Query:  AVGLGILVHRSPEP--NLVVKQSRKLVFSLTSSSNNPS-----FLKSCVLCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVEAYR
        +VGL ++   S E   N+V+K S +L      + +NP+     FLK+C LCNK L   +D+YMYRGD G+CS +CR  Q+ +D++KELEAST+ M+ +YR
Subjt:  AVGLGILVHRSPEP--NLVVKQSRKLVFSLTSSSNNPS-----FLKSCVLCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVEAYR

Query:  QCQRNEG-SETRRLLEDLRR
        +C    G SE+R L +DLRR
Subjt:  QCQRNEG-SETRRLLEDLRR

Q8VZM9 FCS-Like Zinc finger 21.9e-1046.38Show/hide
Query:  PSFLKSCVLCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVEAYRQCQRNEGSET
        P FL SC LC K L  + DI+MYRGD  +CS +CR +QIE DE KE + S    V+A R+ ++   S +
Subjt:  PSFLKSCVLCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVEAYRQCQRNEGSET

Q9FH22 FCS-Like Zinc finger 159.3e-1035.05Show/hide
Query:  NHRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSSNN-------PSFLKSCVLCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKKEL
        N+ N  N   +  G+L+     P +V K +  +  ++T+ + N         FL+ C LC + L P +DIYMY+GD+ +CSV+CR++Q+ MDE++ L
Subjt:  NHRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSSNN-------PSFLKSCVLCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKKEL

Q9LV75 Protein INCREASED RESISTANCE TO MYZUS PERSICAE 11.1e-1057.14Show/hide
Query:  SSNNPSFLKSCVLCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKK
        +SN   FLK+C LCN++L  H DIYMYRG+  +CS++CR +QI++DEKK
Subjt:  SSNNPSFLKSCVLCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKK

Arabidopsis top hitse value%identityAlignment
AT1G53885.1 Protein of unknown function (DUF581)1.6e-2045.83Show/hide
Query:  AVGLGILVHRSPEP--NLVVKQSRKLVFSLTSSSNNPS-----FLKSCVLCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVEAYR
        +VGL ++   S E   N+V+K S +L      + +NP+     FLK+C LCNK L   +D+YMYRGD G+CS +CR  Q+ +D++KELEAST+ M+ +YR
Subjt:  AVGLGILVHRSPEP--NLVVKQSRKLVFSLTSSSNNPS-----FLKSCVLCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVEAYR

Query:  QCQRNEG-SETRRLLEDLRR
        +C    G SE+R L +DLRR
Subjt:  QCQRNEG-SETRRLLEDLRR

AT1G53903.1 Protein of unknown function (DUF581)1.6e-2045.83Show/hide
Query:  AVGLGILVHRSPEP--NLVVKQSRKLVFSLTSSSNNPS-----FLKSCVLCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVEAYR
        +VGL ++   S E   N+V+K S +L      + +NP+     FLK+C LCNK L   +D+YMYRGD G+CS +CR  Q+ +D++KELEAST+ M+ +YR
Subjt:  AVGLGILVHRSPEP--NLVVKQSRKLVFSLTSSSNNPS-----FLKSCVLCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVEAYR

Query:  QCQRNEG-SETRRLLEDLRR
        +C    G SE+R L +DLRR
Subjt:  QCQRNEG-SETRRLLEDLRR

AT4G17670.1 Protein of unknown function (DUF581)1.3e-1146.38Show/hide
Query:  PSFLKSCVLCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVEAYRQCQRNEGSET
        P FL SC LC K L  + DI+MYRGD  +CS +CR +QIE DE KE + S    V+A R+ ++   S +
Subjt:  PSFLKSCVLCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVEAYRQCQRNEGSET

AT5G49120.1 Protein of unknown function (DUF581)6.6e-1135.05Show/hide
Query:  NHRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSSNN-------PSFLKSCVLCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKKEL
        N+ N  N   +  G+L+     P +V K +  +  ++T+ + N         FL+ C LC + L P +DIYMY+GD+ +CSV+CR++Q+ MDE++ L
Subjt:  NHRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSSNN-------PSFLKSCVLCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKKEL

AT5G65040.1 Protein of unknown function (DUF581)7.8e-1257.14Show/hide
Query:  SSNNPSFLKSCVLCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKK
        +SN   FLK+C LCN++L  H DIYMYRG+  +CS++CR +QI++DEKK
Subjt:  SSNNPSFLKSCVLCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCACAGGAATCCAACCAATTTGAAGGCTGTCGGGTTAGGAATCCTTGTTCATCGATCCCCAGAACCAAATCTAGTGGTTAAACAATCCAGAAAGCTTGTTTTTTC
ACTCACTTCATCTTCTAATAACCCATCTTTTCTCAAATCATGTGTTCTTTGCAACAAGAATCTTGACCCCCATGAAGATATTTACATGTACAGGGGAGATCAAGGTTACT
GTAGTGTGAAGTGTCGGAACCAGCAGATTGAAATGGATGAAAAGAAGGAATTAGAAGCTTCTACAAGGAAAATGGTGGAAGCTTACAGGCAATGTCAGAGAAATGAAGGA
AGTGAAACTCGCCGCCTCTTGGAGGATCTCCGGCGGCCACATCACCGGCTTCCATATCTCCGGCGACCTGTTGTTTCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAACCACAGGAATCCAACCAATTTGAAGGCTGTCGGGTTAGGAATCCTTGTTCATCGATCCCCAGAACCAAATCTAGTGGTTAAACAATCCAGAAAGCTTGTTTTTTC
ACTCACTTCATCTTCTAATAACCCATCTTTTCTCAAATCATGTGTTCTTTGCAACAAGAATCTTGACCCCCATGAAGATATTTACATGTACAGGGGAGATCAAGGTTACT
GTAGTGTGAAGTGTCGGAACCAGCAGATTGAAATGGATGAAAAGAAGGAATTAGAAGCTTCTACAAGGAAAATGGTGGAAGCTTACAGGCAATGTCAGAGAAATGAAGGA
AGTGAAACTCGCCGCCTCTTGGAGGATCTCCGGCGGCCACATCACCGGCTTCCATATCTCCGGCGACCTGTTGTTTCGTAGTCTCCTCTGTTTTGAATCTAATGGAAATG
GCAAAATTGTAATTAAAATGGATGGAAGTAATAGAAGCCCTAAAGAGTGTTTTTTTGTTTAAGTTCTTGTCGATGGGTTTCTTTGTGTGTGTGTGTGTGGTAATGATGTA
AGGCTGAAATGAAACATGTTAGGGATAAAAGTACTAACGTTATCTTCAAAATATCTGTCGGTGCATTATTGAGGAGTTGGGGTCTAGGTACGGGTTGGGAGATCTCACAT
GGTTGGAGAAAGGAACGAAACTTTTTTTTTT
Protein sequenceShow/hide protein sequence
MNHRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSSNNPSFLKSCVLCNKNLDPHEDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVEAYRQCQRNEG
SETRRLLEDLRRPHHRLPYLRRPVVS